RNA–Protein interactions for RNA: YJL010C

NOP9, Transcript of Essential subunit of U3-containing 90S preribosome, yeast

Gene NOP9, Length 2,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOP9	YJL010C	MRP7	P12687	371 aa		0.99	□□□□□ -2.25
NOP9	YJL010C	PET123	P17558	318 aa		0.99	□□□□□ -2.25
NOP9	YJL010C	DAL2	P25335	343 aa		0.99	□□□□□ -2.25
NOP9	YJL010C	SPS22	P25380	463 aa		0.99	□□□□□ -2.25
NOP9	YJL010C	TIP1	P27654	210 aa	Predicted RBP	0.99	□□□□□ -2.25
NOP9	YJL010C	ECM25	P32525	599 aa		0.99	□□□□□ -2.25
NOP9	YJL010C	NIP100	P33420	868 aa		0.99	□□□□□ -2.25
NOP9	YJL010C	SEC66	P33754	206 aa		0.99	□□□□□ -2.25
NOP9	YJL010C	MIX23	P38162	196 aa		0.99	□□□□□ -2.25
NOP9	YJL010C	MTC6	P38849	526 aa		0.99	□□□□□ -2.25
NOP9	YJL010C	MST28	P39552	234 aa		0.99	□□□□□ -2.25
NOP9	YJL010C	PRM5	P40476	318 aa		0.99	□□□□□ -2.25
NOP9	YJL010C	SSN8	P47821	323 aa		0.99	□□□□□ -2.25
NOP9	YJL010C	MNP1	P53163	194 aa	Predicted RBP	0.99	□□□□□ -2.25
NOP9	YJL010C	GIR2	Q03768	265 aa	Predicted RBP	0.99	□□□□□ -2.25
NOP9	YJL010C	HRI1	Q05905	244 aa	Known RBP	0.99	□□□□□ -2.25
NOP9	YJL010C	SIL1	Q08199	421 aa		0.99	□□□□□ -2.25
NOP9	YJL010C	PKH2	Q12236	1081 aa	Known RBP	0.99	□□□□□ -2.25
NOP9	YJL010C	SUP35	P05453	685 aa	Known RBP	0.98	□□□□□ -2.25
NOP9	YJL010C	SLY1	P22213	666 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	RVS161	P25343	265 aa	Known RBP	0.98	□□□□□ -2.25
NOP9	YJL010C	CDC60	P26637	1090 aa	Known RBP	0.98	□□□□□ -2.25
NOP9	YJL010C	GYP6	P32806	458 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	VHC1	P38329	1120 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	RRT2	P38332	387 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	OTU2	P38747	307 aa	Known RBP	0.98	□□□□□ -2.25
NOP9	YJL010C	CCT2	P39076	527 aa	Known RBP	0.98	□□□□□ -2.25
NOP9	YJL010C	REE1	P40893	198 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	ECM27	P47144	725 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	TIS11	P47977	285 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	JJJ1	P53863	590 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	MRPL19	P53875	158 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	HXT11	P54862	567 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	VPS72	Q03388	795 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	PPM1	Q04081	328 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	HSP31	Q04432	237 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	RQC1	Q05468	723 aa	Known RBP	0.98	□□□□□ -2.25
NOP9	YJL010C	MHR1	Q06630	226 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	TIM18	Q08749	192 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	SNX3	Q08826	162 aa	Known RBP	0.98	□□□□□ -2.25
NOP9	YJL010C	RRI2	Q12348	645 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	RAD61	Q99359	647 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	HIS4	P00815	799 aa	Known RBP	0.98	□□□□□ -2.25
NOP9	YJL010C	TRP1	P00912	224 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	TEF1	P02994	458 aa	Known RBP	0.98	□□□□□ -2.25
NOP9	YJL010C	CKA1	P15790	372 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	SRV2	P17555	526 aa	Known RBP	0.98	□□□□□ -2.25
NOP9	YJL010C	ISY1	P21374	235 aa	Predicted RBP	0.98	□□□□□ -2.25
NOP9	YJL010C	HXT3	P32466	567 aa	Known RBP	0.98	□□□□□ -2.25
NOP9	YJL010C	PRP21	P32524	280 aa	Predicted RBP	0.98	□□□□□ -2.25
NOP9	YJL010C	JNM1	P36224	373 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	UTP9	P38882	575 aa	Known RBP	0.98	□□□□□ -2.25
NOP9	YJL010C	SMF1	P38925	575 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	0.98	□□□□□ -2.25	not detected
NOP9	YJL010C	LYS1	P38998	373 aa	RIP-Chip data	0.98	□□□□□ -2.25	not detected
NOP9	YJL010C	NDE1	P40215	560 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	ESL1	P40456	1118 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	PAN6	P40459	309 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	VMA13	P41807	478 aa	Known RBP	0.98	□□□□□ -2.25
NOP9	YJL010C	HMS2	P47175	358 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	YGL039W	P53183	348 aa	Known RBP	0.98	□□□□□ -2.25
NOP9	YJL010C	FRE4	P53746	719 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	PEX25	Q02969	394 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	HER2	Q03557	464 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	TSR2	Q06672	205 aa	Known RBP	0.98	□□□□□ -2.25
NOP9	YJL010C	REX4	Q08237	289 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	RBD2	Q12270	262 aa		0.98	□□□□□ -2.25
NOP9	YJL010C	ARG4	P04076	463 aa	Predicted RBP	0.97	□□□□□ -2.25
NOP9	YJL010C	GPH1	P06738	902 aa	Known RBP	0.97	□□□□□ -2.25
NOP9	YJL010C	RED1	P14291	827 aa		0.97	□□□□□ -2.25
NOP9	YJL010C	ROX1	P25042	368 aa		0.97	□□□□□ -2.25
NOP9	YJL010C	SNT1	P25357	1226 aa		0.97	□□□□□ -2.25
NOP9	YJL010C	ITR1	P30605	584 aa		0.97	□□□□□ -2.25
NOP9	YJL010C	RPN12	P32496	274 aa		0.97	□□□□□ -2.25
NOP9	YJL010C	MUD1	P32605	298 aa	Known RBP	0.97	□□□□□ -2.25
NOP9	YJL010C	MNS1	P32906	549 aa		0.97	□□□□□ -2.25
NOP9	YJL010C	HCS1	P34243	683 aa		0.97	□□□□□ -2.25
NOP9	YJL010C	KKQ8	P36004	724 aa		0.97	□□□□□ -2.25
NOP9	YJL010C	MRPL10	P36520	322 aa		0.97	□□□□□ -2.25
NOP9	YJL010C	ARA1	P38115	344 aa		0.97	□□□□□ -2.25
NOP9	YJL010C	MSG5	P38590	489 aa		0.97	□□□□□ -2.25
NOP9	YJL010C	YHR054C	P38780	354 aa		0.97	□□□□□ -2.25
NOP9	YJL010C	SAS2	P40963	338 aa		0.97	□□□□□ -2.25
NOP9	YJL010C	IRC6	P43615	237 aa		0.97	□□□□□ -2.25
NOP9	YJL010C	PHB2	P50085	310 aa		0.97	□□□□□ -2.25
NOP9	YJL010C	FMS1	P50264	508 aa		0.97	□□□□□ -2.25
NOP9	YJL010C	BET5	Q03630	159 aa		0.97	□□□□□ -2.25
NOP9	YJL010C	VTA1	Q06263	330 aa		0.97	□□□□□ -2.25
NOP9	YJL010C	BSC6	Q08280	497 aa		0.97	□□□□□ -2.25
NOP9	YJL010C	GRX6	Q12438	231 aa		0.97	□□□□□ -2.25
NOP9	YJL010C	RIP1	P08067	215 aa		0.96	□□□□□ -2.26
NOP9	YJL010C	NFT1	P0CE68	1218 aa		0.96	□□□□□ -2.26
NOP9	YJL010C	RPS8A	P0CX39	200 aa	Known RBP	0.96	□□□□□ -2.26
NOP9	YJL010C	RPS8B	P0CX40	200 aa	Known RBP	0.96	□□□□□ -2.26
NOP9	YJL010C	SPO7	P18410	259 aa		0.96	□□□□□ -2.26
NOP9	YJL010C	CLB3	P24870	427 aa		0.96	□□□□□ -2.26
NOP9	YJL010C	BEM1	P29366	551 aa		0.96	□□□□□ -2.26
NOP9	YJL010C	HXT1	P32465	570 aa		0.96	□□□□□ -2.26
NOP9	YJL010C	SAS3	P34218	831 aa		0.96	□□□□□ -2.26
NOP9	YJL010C	YBR137W	P38276	179 aa		0.96	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms