RNA–Protein interactions for RNA: YIR013C

GAT4, Transcript of Protein containing GATA family zinc finger motifs, yeast

Gene GAT4, Length 366 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GAT4	YIR013C	GLO4	Q12320	285 aa		4.9	□□□□□ -1.63
GAT4	YIR013C	FLO9	P39712	1322 aa		4.9	□□□□□ -1.63
GAT4	YIR013C	YMR085W	P0CF18	432 aa		4.89	□□□□□ -1.63
GAT4	YIR013C	PDA1	P16387	420 aa	Known RBP	4.89	□□□□□ -1.63
GAT4	YIR013C	SRV2	P17555	526 aa	Known RBP	4.89	□□□□□ -1.63
GAT4	YIR013C	PHA2	P32452	334 aa		4.89	□□□□□ -1.63
GAT4	YIR013C	NUP120	P35729	1037 aa		4.89	□□□□□ -1.63
GAT4	YIR013C	ALG3	P38179	458 aa		4.89	□□□□□ -1.63
GAT4	YIR013C	YBR062C	P38239	180 aa		4.89	□□□□□ -1.63
GAT4	YIR013C	PHO89	P38361	574 aa		4.89	□□□□□ -1.63
GAT4	YIR013C	GGC1	P38988	300 aa		4.89	□□□□□ -1.63
GAT4	YIR013C	NPT1	P39683	429 aa	Known RBP	4.89	□□□□□ -1.63
GAT4	YIR013C	UTP25	P40498	721 aa	Known RBP	4.89	□□□□□ -1.63
GAT4	YIR013C	RPL10	P41805	221 aa	Known RBP	4.89	□□□□□ -1.63
GAT4	YIR013C	SEC27	P41811	889 aa	Known RBP	4.89	□□□□□ -1.63
GAT4	YIR013C	CLD1	P53264	445 aa		4.89	□□□□□ -1.63
GAT4	YIR013C	YNR021W	P53723	404 aa	Known RBP	4.89	□□□□□ -1.63
GAT4	YIR013C	TAF12	Q03761	539 aa		4.89	□□□□□ -1.63
GAT4	YIR013C	TAF11	Q04226	346 aa		4.89	□□□□□ -1.63
GAT4	YIR013C	TMA46	Q12000	345 aa	Known RBP	4.89	□□□□□ -1.63
GAT4	YIR013C	REX3	Q12090	404 aa		4.89	□□□□□ -1.63
GAT4	YIR013C	WSC3	Q12215	556 aa		4.89	□□□□□ -1.63
GAT4	YIR013C	MDY2	Q12285	212 aa		4.89	□□□□□ -1.63
GAT4	YIR013C	NCA2	Q12374	616 aa		4.89	□□□□□ -1.63
GAT4	YIR013C	PAR32	Q12515	295 aa	Known RBP	4.89	□□□□□ -1.63
GAT4	YIR013C	BPH1	P25356	2167 aa		4.89	□□□□□ -1.63
GAT4	YIR013C	SPT3	P06844	337 aa		4.88	□□□□□ -1.63
GAT4	YIR013C	RNA1	P11745	407 aa	Known RBP	4.88	□□□□□ -1.63
GAT4	YIR013C	GUK1	P15454	187 aa	Known RBP	4.88	□□□□□ -1.63
GAT4	YIR013C	ERG1	P32476	496 aa	Known RBP	4.88	□□□□□ -1.63
GAT4	YIR013C	SUI1	P32911	108 aa	Known RBP	4.88	□□□□□ -1.63
GAT4	YIR013C	ASK1	P35734	292 aa		4.88	□□□□□ -1.63
GAT4	YIR013C	KKQ8	P36004	724 aa		4.88	□□□□□ -1.63
GAT4	YIR013C	BZZ1	P38822	633 aa		4.88	□□□□□ -1.63
GAT4	YIR013C	FET3	P38993	636 aa		4.88	□□□□□ -1.63
GAT4	YIR013C	MSS4	P38994	779 aa		4.88	□□□□□ -1.63
GAT4	YIR013C	YHB1	P39676	399 aa	Known RBP	4.88	□□□□□ -1.63
GAT4	YIR013C	MEP1	P40260	492 aa		4.88	□□□□□ -1.63
GAT4	YIR013C	MAD3	P47074	515 aa		4.88	□□□□□ -1.63
GAT4	YIR013C	LIA1	P47120	325 aa	Known RBP	4.88	□□□□□ -1.63
GAT4	YIR013C	YJR149W	P47177	404 aa		4.88	□□□□□ -1.63
GAT4	YIR013C	AIF1	P52923	378 aa		4.88	□□□□□ -1.63
GAT4	YIR013C	YNL058C	P53947	316 aa		4.88	□□□□□ -1.63
GAT4	YIR013C	RMI1	Q02685	241 aa		4.88	□□□□□ -1.63
GAT4	YIR013C	GAS3	Q03655	524 aa		4.88	□□□□□ -1.63
GAT4	YIR013C	FAR8	Q05040	523 aa		4.88	□□□□□ -1.63
GAT4	YIR013C	MCH5	Q08777	521 aa		4.88	□□□□□ -1.63
GAT4	YIR013C	COX6	P00427	148 aa		4.87	□□□□□ -1.63
GAT4	YIR013C	COR1	P07256	457 aa		4.87	□□□□□ -1.63
GAT4	YIR013C	STE12	P13574	688 aa		4.87	□□□□□ -1.63
GAT4	YIR013C	PRP6	P19735	899 aa	Predicted RBP	4.87	□□□□□ -1.63
GAT4	YIR013C	YCR090C	P25654	182 aa	Known RBP	4.87	□□□□□ -1.63
GAT4	YIR013C	CMK1	P27466	446 aa	Known RBP	4.87	□□□□□ -1.63
GAT4	YIR013C	ZIP1	P31111	875 aa		4.87	□□□□□ -1.63
GAT4	YIR013C	SDH3	P33421	198 aa		4.87	□□□□□ -1.63
GAT4	YIR013C	APT2	P36973	181 aa		4.87	□□□□□ -1.63
GAT4	YIR013C	TDP1	P38319	544 aa		4.87	□□□□□ -1.63
GAT4	YIR013C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
GAT4	YIR013C	REV7	P38927	245 aa		4.87	□□□□□ -1.63
GAT4	YIR013C	YIL169C	P40442	995 aa		4.87	□□□□□ -1.63
GAT4	YIR013C	COA1	P40452	197 aa		4.87	□□□□□ -1.63
GAT4	YIR013C	PRM2	P40534	656 aa		4.87	□□□□□ -1.63
GAT4	YIR013C	IRC6	P43615	237 aa		4.87	□□□□□ -1.63
GAT4	YIR013C	YJL043W	P47053	257 aa		4.87	□□□□□ -1.63
GAT4	YIR013C	ROG1	P53118	685 aa		4.87	□□□□□ -1.63
GAT4	YIR013C	IBD2	P53892	351 aa		4.87	□□□□□ -1.63
GAT4	YIR013C	UBX4	P54730	416 aa		4.87	□□□□□ -1.63
GAT4	YIR013C	CGI121	Q03705	181 aa	Known RBP	4.87	□□□□□ -1.63
GAT4	YIR013C	BOP2	Q06150	570 aa		4.87	□□□□□ -1.63
GAT4	YIR013C	RIF2	Q06208	395 aa		4.87	□□□□□ -1.63
GAT4	YIR013C	RAD34	Q06665	692 aa		4.87	□□□□□ -1.63
GAT4	YIR013C	GPB1	Q08886	897 aa		4.87	□□□□□ -1.63
GAT4	YIR013C	CCW14	O13547	238 aa		4.86	□□□□□ -1.63
GAT4	YIR013C	STE3	P06783	470 aa		4.86	□□□□□ -1.63
GAT4	YIR013C	RPI1	P23250	407 aa	Known RBP	4.86	□□□□□ -1.63
GAT4	YIR013C	SGV1	P23293	657 aa	Known RBP	4.86	□□□□□ -1.63
GAT4	YIR013C	ERG8	P24521	451 aa		4.86	□□□□□ -1.63
GAT4	YIR013C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
GAT4	YIR013C	LTV1	P34078	463 aa		4.86	□□□□□ -1.63
GAT4	YIR013C	LIN1	P38852	340 aa	Predicted RBP	4.86	□□□□□ -1.63
GAT4	YIR013C	EMP65	P40085	556 aa		4.86	□□□□□ -1.63
GAT4	YIR013C	YMR144W	P40214	342 aa	Known RBP	4.86	□□□□□ -1.63
GAT4	YIR013C	NEO1	P40527	1151 aa		4.86	□□□□□ -1.63
GAT4	YIR013C	PKP1	P40530	394 aa		4.86	□□□□□ -1.63
GAT4	YIR013C	AXL1	P40851	1208 aa		4.86	□□□□□ -1.63
GAT4	YIR013C	EMC2	P47133	292 aa	Known RBP	4.86	□□□□□ -1.63
GAT4	YIR013C	RAD17	P48581	401 aa		4.86	□□□□□ -1.63
GAT4	YIR013C	RCF2	P53721	224 aa		4.86	□□□□□ -1.63
GAT4	YIR013C	IST1	P53843	298 aa	Predicted RBP	4.86	□□□□□ -1.63
GAT4	YIR013C	VPS16	Q03308	798 aa		4.86	□□□□□ -1.63
GAT4	YIR013C	PLB2	Q03674	706 aa		4.86	□□□□□ -1.63
GAT4	YIR013C	HPT1	Q04178	221 aa	Known RBP	4.86	□□□□□ -1.63
GAT4	YIR013C	YPR174C	Q06616	221 aa	Predicted RBP	4.86	□□□□□ -1.63
GAT4	YIR013C	SPE4	Q12455	300 aa		4.86	□□□□□ -1.63
GAT4	YIR013C	MHT1	Q12525	324 aa		4.86	□□□□□ -1.63
GAT4	YIR013C	Q0144	Q9ZZW2	109 aa		4.86	□□□□□ -1.63
GAT4	YIR013C	SLH1	P53327	1967 aa	Known RBP	4.85	□□□□□ -1.63
GAT4	YIR013C	PRT1	P06103	763 aa	Known RBP	4.85	□□□□□ -1.63
GAT4	YIR013C	RPS21A	P0C0V8	87 aa	Known RBP	4.85	□□□□□ -1.63
GAT4	YIR013C	ART10	P18634	518 aa	Known RBP	4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms