RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W SGV1P23293 657 aaKnown RBP6.35□□□□□ -1.39
SNU71YGR013W GMH1P36125 273 aa6.35□□□□□ -1.39
SNU71YGR013W ROG1P53118 685 aa6.35□□□□□ -1.39
SNU71YGR013W PNC1P53184 216 aaKnown RBP6.35□□□□□ -1.39
SNU71YGR013W YOR012WQ12351 137 aa6.35□□□□□ -1.39
SNU71YGR013W STE11P23561 717 aa6.34□□□□□ -1.39
SNU71YGR013W SIN4P32259 974 aa6.34□□□□□ -1.39
SNU71YGR013W CBF5P33322 483 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
SNU71YGR013W PPS1P38148 807 aa6.34□□□□□ -1.39
SNU71YGR013W MNL1P38888 796 aa6.34□□□□□ -1.39
SNU71YGR013W AIM20P40451 204 aa6.34□□□□□ -1.39
SNU71YGR013W YFL015CP43578 164 aa6.34□□□□□ -1.39
SNU71YGR013W HEF3P53978 1044 aaKnown RBP6.34□□□□□ -1.39
SNU71YGR013W YDR541CQ03049 344 aa6.34□□□□□ -1.39
SNU71YGR013W GFD1Q04839 188 aaKnown RBP6.34□□□□□ -1.39
SNU71YGR013W ARV1Q06541 321 aa6.34□□□□□ -1.39
SNU71YGR013W CNA1P23287 553 aa6.34□□□□□ -1.39
SNU71YGR013W PET18P25362 215 aa6.34□□□□□ -1.39
SNU71YGR013W RHB1P25378 209 aa6.34□□□□□ -1.39
SNU71YGR013W AIM3P38266 947 aaKnown RBP6.34□□□□□ -1.39
SNU71YGR013W ARP1P38696 384 aa6.34□□□□□ -1.39
SNU71YGR013W GPI16P38875 610 aa6.34□□□□□ -1.39
SNU71YGR013W GCD14P46959 383 aaPredicted RBP6.34□□□□□ -1.39
SNU71YGR013W ASN2P49090 572 aaKnown RBP6.34□□□□□ -1.39
SNU71YGR013W YGR126WP53274 230 aa6.34□□□□□ -1.39
SNU71YGR013W RNT1Q02555 471 aa6.34□□□□□ -1.39
SNU71YGR013W RAD34Q06665 692 aa6.34□□□□□ -1.39
SNU71YGR013W NTO1Q12311 748 aa6.34□□□□□ -1.39
SNU71YGR013W SAC3P46674 1301 aa6.33□□□□□ -1.4
SNU71YGR013W RAP1P11938 827 aa6.33□□□□□ -1.4
SNU71YGR013W SEC63P14906 663 aa6.33□□□□□ -1.4
SNU71YGR013W TKL1P23254 680 aaKnown RBP6.33□□□□□ -1.4
SNU71YGR013W YER130CP39959 443 aa6.33□□□□□ -1.4
SNU71YGR013W MIT1P40002 666 aa6.33□□□□□ -1.4
SNU71YGR013W ARG2P40360 574 aa6.33□□□□□ -1.4
SNU71YGR013W NDC80P40460 691 aa6.33□□□□□ -1.4
SNU71YGR013W ULP2P40537 1034 aaPredicted RBP6.33□□□□□ -1.4
SNU71YGR013W MNN10P50108 393 aaKnown RBP6.33□□□□□ -1.4
SNU71YGR013W PFA5Q03289 374 aa6.33□□□□□ -1.4
SNU71YGR013W TY3A-GQ12173 290 aa6.33□□□□□ -1.4
SNU71YGR013W RUD3Q12234 484 aaKnown RBP6.33□□□□□ -1.4
SNU71YGR013W SRN2Q99176 213 aa6.33□□□□□ -1.4
SNU71YGR013W TY3A-IQ99219 290 aa6.33□□□□□ -1.4
SNU71YGR013W RRP5Q05022 1729 aaKnown RBP6.33□□□□□ -1.4
SNU71YGR013W ADE6P38972 1358 aaKnown RBP6.32□□□□□ -1.4
SNU71YGR013W TDH1P00360 332 aaKnown RBP6.32□□□□□ -1.4
SNU71YGR013W SAM1P10659 382 aaKnown RBP6.32□□□□□ -1.4
SNU71YGR013W ATP10P18496 279 aa6.32□□□□□ -1.4
SNU71YGR013W TSA1P34760 196 aaKnown RBP6.32□□□□□ -1.4
SNU71YGR013W RFC3P38629 340 aa6.32□□□□□ -1.4
SNU71YGR013W IAH1P41734 238 aa6.32□□□□□ -1.4
SNU71YGR013W YTP1P53584 459 aa6.32□□□□□ -1.4
SNU71YGR013W SMX3P54999 86 aaPredicted RBP6.32□□□□□ -1.4
SNU71YGR013W YLR297WQ05899 129 aa6.32□□□□□ -1.4
SNU71YGR013W IPK1Q06667 281 aa6.32□□□□□ -1.4
SNU71YGR013W PPR1P07272 904 aaPredicted RBP6.32□□□□□ -1.4
SNU71YGR013W DMC1P25453 334 aa6.32□□□□□ -1.4
SNU71YGR013W SHP1P34223 423 aa6.32□□□□□ -1.4
SNU71YGR013W GLG1P36143 616 aa6.32□□□□□ -1.4
SNU71YGR013W TIF5P38431 405 aaKnown RBP6.32□□□□□ -1.4
SNU71YGR013W STN1P38960 494 aa6.32□□□□□ -1.4
SNU71YGR013W SEC9P40357 651 aa6.32□□□□□ -1.4
SNU71YGR013W DRN1P53255 507 aaKnown RBP6.32□□□□□ -1.4
SNU71YGR013W THP1Q08231 455 aa6.32□□□□□ -1.4
SNU71YGR013W MRP2P10663 115 aaPredicted RBP6.31□□□□□ -1.4
SNU71YGR013W UNG1P12887 359 aa6.31□□□□□ -1.4
SNU71YGR013W GAL3P13045 520 aa6.31□□□□□ -1.4
SNU71YGR013W NTG1P31378 399 aa6.31□□□□□ -1.4
SNU71YGR013W YGL117WP53133 265 aa6.31□□□□□ -1.4
SNU71YGR013W RIM8P53179 542 aa6.31□□□□□ -1.4
SNU71YGR013W PIB2P53191 635 aa6.31□□□□□ -1.4
SNU71YGR013W LSC1P53598 329 aaKnown RBP6.31□□□□□ -1.4
SNU71YGR013W YLR455WQ06188 304 aa6.31□□□□□ -1.4
SNU71YGR013W YLR040CQ07988 224 aa6.31□□□□□ -1.4
SNU71YGR013W STE2D6VTK4 431 aa6.3□□□□□ -1.4
SNU71YGR013W ADE4P04046 510 aaKnown RBP6.3□□□□□ -1.4
SNU71YGR013W YMR085WP0CF18 432 aa6.3□□□□□ -1.4
SNU71YGR013W TPO5P36029 618 aa6.3□□□□□ -1.4
SNU71YGR013W MRPL37P36532 105 aa6.3□□□□□ -1.4
SNU71YGR013W YMC2P38087 329 aa6.3□□□□□ -1.4
SNU71YGR013W DUG2P38149 878 aa6.3□□□□□ -1.4
SNU71YGR013W TCM62P38228 572 aaKnown RBP6.3□□□□□ -1.4
SNU71YGR013W CDC1P40986 491 aa6.3□□□□□ -1.4
SNU71YGR013W TAX4P47030 604 aa6.3□□□□□ -1.4
SNU71YGR013W YGL242CP53066 181 aa6.3□□□□□ -1.4
SNU71YGR013W PSK1P31374 1356 aa6.3□□□□□ -1.4
SNU71YGR013W YER145C-AA0A023PYF4 145 aa6.3□□□□□ -1.4
SNU71YGR013W SCEIP03882 235 aa6.3□□□□□ -1.4
SNU71YGR013W PMA1P05030 918 aaKnown RBP6.3□□□□□ -1.4
SNU71YGR013W SEC62P21825 274 aa6.3□□□□□ -1.4
SNU71YGR013W SAC1P32368 623 aaKnown RBP6.3□□□□□ -1.4
SNU71YGR013W MRP4P32902 394 aa6.3□□□□□ -1.4
SNU71YGR013W YKL070WP36087 169 aa6.3□□□□□ -1.4
SNU71YGR013W CBR1P38626 284 aaKnown RBP6.3□□□□□ -1.4
SNU71YGR013W BZZ1P38822 633 aa6.3□□□□□ -1.4
SNU71YGR013W TFG2P41896 400 aaPredicted RBP6.3□□□□□ -1.4
SNU71YGR013W TDA10P42938 290 aa6.3□□□□□ -1.4
SNU71YGR013W PYK2P52489 506 aaKnown RBP6.3□□□□□ -1.4
SNU71YGR013W STD1Q02794 444 aa6.3□□□□□ -1.4
SNU71YGR013W HMX1P32339 317 aa6.29□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms