RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W MED4Q12343 284 aa1.32□□□□□ -2.2
MSN5YDR335W VCX1Q99385 411 aa1.32□□□□□ -2.2
MSN5YDR335W RPL31BP0C2H9 113 aaKnown RBP1.32□□□□□ -2.2
MSN5YDR335W GAL3P13045 520 aa1.32□□□□□ -2.2
MSN5YDR335W CKI1P20485 582 aa1.32□□□□□ -2.2
MSN5YDR335W SAG1P20840 650 aa1.32□□□□□ -2.2
MSN5YDR335W SEC62P21825 274 aa1.32□□□□□ -2.2
MSN5YDR335W SLM5P25345 492 aaKnown RBP1.32□□□□□ -2.2
MSN5YDR335W GEX1P25596 615 aa1.32□□□□□ -2.2
MSN5YDR335W YPS1P32329 569 aa1.32□□□□□ -2.2
MSN5YDR335W SRB5P32585 307 aa1.32□□□□□ -2.2
MSN5YDR335W YBR144CP34215 104 aa1.32□□□□□ -2.2
MSN5YDR335W LST4P34239 828 aa1.32□□□□□ -2.2
MSN5YDR335W ECM4P36156 370 aa1.32□□□□□ -2.2
MSN5YDR335W GEX2P36173 615 aa1.32□□□□□ -2.2
MSN5YDR335W STV1P37296 890 aa1.32□□□□□ -2.2
MSN5YDR335W ROT2P38138 954 aa1.32□□□□□ -2.2
MSN5YDR335W ZTA1P38230 334 aaKnown RBP1.32□□□□□ -2.2
MSN5YDR335W RRP4P38792 359 aaKnown RBP1.32□□□□□ -2.2
MSN5YDR335W YPT11P48559 417 aa1.32□□□□□ -2.2
MSN5YDR335W LIF1P53150 421 aa1.32□□□□□ -2.2
MSN5YDR335W YGR168CP53293 376 aa1.32□□□□□ -2.2
MSN5YDR335W SLI1P53304 468 aa1.32□□□□□ -2.2
MSN5YDR335W TEX1P53851 422 aaKnown RBP1.32□□□□□ -2.2
MSN5YDR335W ARG5,6Q01217 863 aa1.32□□□□□ -2.2
MSN5YDR335W URC2Q04411 772 aa1.32□□□□□ -2.2
MSN5YDR335W SOV1Q04748 898 aa1.32□□□□□ -2.2
MSN5YDR335W YLR173WQ06247 608 aa1.32□□□□□ -2.2
MSN5YDR335W CDA1Q06702 301 aa1.32□□□□□ -2.2
MSN5YDR335W VAM3Q12241 283 aa1.32□□□□□ -2.2
MSN5YDR335W MEX67Q99257 599 aaKnown RBP1.32□□□□□ -2.2
MSN5YDR335W TY4B-JP47024 1803 aa1.32□□□□□ -2.2
MSN5YDR335W LEU4P06208 619 aaKnown RBP1.31□□□□□ -2.2
MSN5YDR335W ART10P18634 518 aaKnown RBP1.31□□□□□ -2.2
MSN5YDR335W MRPL9P31334 269 aa1.31□□□□□ -2.2
MSN5YDR335W ASF2P32448 525 aaPredicted RBP1.31□□□□□ -2.2
MSN5YDR335W ERG1P32476 496 aaKnown RBP1.31□□□□□ -2.2
MSN5YDR335W TIF3P34167 436 aaKnown RBP1.31□□□□□ -2.2
MSN5YDR335W RPL32P38061 130 aaKnown RBP1.31□□□□□ -2.2
MSN5YDR335W TDA11P38854 504 aa1.31□□□□□ -2.2
MSN5YDR335W FHL1P39521 936 aa1.31□□□□□ -2.2
MSN5YDR335W ISC1P40015 477 aaKnown RBP1.31□□□□□ -2.2
MSN5YDR335W GET2P40056 285 aa1.31□□□□□ -2.2
MSN5YDR335W YRB2P40517 327 aa1.31□□□□□ -2.2
MSN5YDR335W ELP2P42935 788 aa1.31□□□□□ -2.2
MSN5YDR335W MSE1P48525 536 aa1.31□□□□□ -2.2
MSN5YDR335W STR3P53101 465 aaKnown RBP1.31□□□□□ -2.2
MSN5YDR335W COQ6P53318 479 aa1.31□□□□□ -2.2
MSN5YDR335W SPC98P53540 846 aa1.31□□□□□ -2.2
MSN5YDR335W PRO2P54885 456 aaKnown RBP1.31□□□□□ -2.2
MSN5YDR335W FIN1Q03898 291 aa1.31□□□□□ -2.2
MSN5YDR335W TAF3Q12297 353 aa1.31□□□□□ -2.2
MSN5YDR335W FMP16Q12497 93 aa1.31□□□□□ -2.2
MSN5YDR335W NBL1Q3E7Y6 73 aa1.31□□□□□ -2.2
MSN5YDR335W MTR10Q99189 972 aa1.31□□□□□ -2.2
MSN5YDR335W HRP1Q99383 534 aaKnown RBP1.31□□□□□ -2.2
MSN5YDR335W RPL24AP04449 155 aaKnown RBP1.31□□□□□ -2.2
MSN5YDR335W RPL18AP0CX49 186 aaKnown RBP1.31□□□□□ -2.2
MSN5YDR335W RPL18BP0CX50 186 aaKnown RBP1.31□□□□□ -2.2
MSN5YDR335W MRP1P10662 321 aaKnown RBP1.31□□□□□ -2.2
MSN5YDR335W NHP6BP11633 99 aaKnown RBP1.31□□□□□ -2.2
MSN5YDR335W RNA1P11745 407 aaKnown RBP1.31□□□□□ -2.2
MSN5YDR335W AMD1P15274 810 aaKnown RBP1.31□□□□□ -2.2
MSN5YDR335W DBP3P20447 523 aaKnown RBP1.31□□□□□ -2.2
MSN5YDR335W STE11P23561 717 aa1.31□□□□□ -2.2
MSN5YDR335W FUB1P25659 250 aa1.31□□□□□ -2.2
MSN5YDR335W PMI40P29952 429 aaKnown RBP1.31□□□□□ -2.2
MSN5YDR335W MTC7P32633 139 aa1.31□□□□□ -2.2
MSN5YDR335W SKG6P32900 734 aaPredicted RBP1.31□□□□□ -2.2
MSN5YDR335W ADE17P38009 592 aaKnown RBP1.31□□□□□ -2.2
MSN5YDR335W YBL028CP38202 106 aa1.31□□□□□ -2.2
MSN5YDR335W DBP8P38719 431 aa1.31□□□□□ -2.2
MSN5YDR335W SAP1P39955 897 aaKnown RBP1.31□□□□□ -2.2
MSN5YDR335W SEC9P40357 651 aa1.31□□□□□ -2.2
MSN5YDR335W MET28P40573 187 aa1.31□□□□□ -2.2
MSN5YDR335W TOS3P43637 560 aa1.31□□□□□ -2.2
MSN5YDR335W FMS1P50264 508 aa1.31□□□□□ -2.2
MSN5YDR335W RIM8P53179 542 aa1.31□□□□□ -2.2
MSN5YDR335W VOA1P53262 265 aa1.31□□□□□ -2.2
MSN5YDR335W ADE16P54113 591 aaKnown RBP1.31□□□□□ -2.2
MSN5YDR335W SKO1Q02100 647 aa1.31□□□□□ -2.2
MSN5YDR335W SLK19Q08581 821 aaKnown RBP1.31□□□□□ -2.2
MSN5YDR335W VIK1Q12045 647 aa1.31□□□□□ -2.2
MSN5YDR335W YLR049CQ12110 428 aa1.31□□□□□ -2.2
MSN5YDR335W TMS1Q12116 473 aa1.31□□□□□ -2.2
MSN5YDR335W YOR029WQ12243 111 aa1.31□□□□□ -2.2
MSN5YDR335W TY4B-HP0C2J7 1802 aa1.31□□□□□ -2.2
MSN5YDR335W OPI3P05375 206 aa1.31□□□□□ -2.2
MSN5YDR335W COR1P07256 457 aa1.31□□□□□ -2.2
MSN5YDR335W PUT2P07275 575 aa1.31□□□□□ -2.2
MSN5YDR335W REV1P12689 985 aa1.31□□□□□ -2.2
MSN5YDR335W PET123P17558 318 aa1.31□□□□□ -2.2
MSN5YDR335W VPS34P22543 875 aa1.31□□□□□ -2.2
MSN5YDR335W RHB1P25378 209 aa1.31□□□□□ -2.2
MSN5YDR335W NUP133P36161 1157 aa1.31□□□□□ -2.2
MSN5YDR335W RTR1P40084 226 aaPredicted RBP1.31□□□□□ -2.2
MSN5YDR335W VRG4P40107 337 aa1.31□□□□□ -2.2
MSN5YDR335W YIR014WP40570 242 aa1.31□□□□□ -2.2
MSN5YDR335W MPS3P47069 682 aa1.31□□□□□ -2.2
MSN5YDR335W ECM27P47144 725 aa1.31□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 80.2 ms