RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	CRM1	P30822	1084 aa	Known RBP	1.26	□□□□□ -2.21
HMRA2	YCR096C	RIB5	P38145	238 aa		1.26	□□□□□ -2.21
HMRA2	YCR096C	CST26	P38226	397 aa		1.26	□□□□□ -2.21
HMRA2	YCR096C	YBR225W	P38321	900 aa		1.26	□□□□□ -2.21
HMRA2	YCR096C	MET28	P40573	187 aa		1.26	□□□□□ -2.21
HMRA2	YCR096C	VMA13	P41807	478 aa	Known RBP	1.26	□□□□□ -2.21
HMRA2	YCR096C	PCP1	P53259	346 aa		1.26	□□□□□ -2.21
HMRA2	YCR096C	YDR239C	Q03780	787 aa		1.26	□□□□□ -2.21
HMRA2	YCR096C	FIN1	Q03898	291 aa		1.26	□□□□□ -2.21
HMRA2	YCR096C	ECM11	Q04110	302 aa		1.26	□□□□□ -2.21
HMRA2	YCR096C	CUE5	Q08412	411 aa	Known RBP	1.26	□□□□□ -2.21
HMRA2	YCR096C	YML133C	Q03099	1374 aa		1.25	□□□□□ -2.21
HMRA2	YCR096C	YLL067C	Q07888	1374 aa		1.25	□□□□□ -2.21
HMRA2	YCR096C	YLL066C	Q99208	1374 aa		1.25	□□□□□ -2.21
HMRA2	YCR096C	YLR278C	Q05854	1341 aa		1.25	□□□□□ -2.21
HMRA2	YCR096C	FOB1	O13329	566 aa		1.25	□□□□□ -2.21
HMRA2	YCR096C	TRP1	P00912	224 aa		1.25	□□□□□ -2.21
HMRA2	YCR096C	LEU4	P06208	619 aa	Known RBP	1.25	□□□□□ -2.21
HMRA2	YCR096C	NFT1	P0CE68	1218 aa		1.25	□□□□□ -2.21
HMRA2	YCR096C	YAR066W	P0CX18	203 aa		1.25	□□□□□ -2.21
HMRA2	YCR096C	YHR214W	P0CX19	203 aa		1.25	□□□□□ -2.21
HMRA2	YCR096C	MRE11	P32829	692 aa		1.25	□□□□□ -2.21
HMRA2	YCR096C	CCT2	P39076	527 aa	Known RBP	1.25	□□□□□ -2.21
HMRA2	YCR096C	YIP1	P53039	248 aa		1.25	□□□□□ -2.21
HMRA2	YCR096C	YGR066C	P53242	292 aa		1.25	□□□□□ -2.21
HMRA2	YCR096C	OGG1	P53397	376 aa	Predicted RBP	1.25	□□□□□ -2.21
HMRA2	YCR096C	ODC1	Q03028	310 aa		1.25	□□□□□ -2.21
HMRA2	YCR096C	MRD1	Q06106	887 aa	Known RBP	1.25	□□□□□ -2.21
HMRA2	YCR096C	YPR022C	Q12139	1133 aa		1.25	□□□□□ -2.21
HMRA2	YCR096C	AHC1	Q12433	566 aa		1.25	□□□□□ -2.21
HMRA2	YCR096C	CYC3	P06182	269 aa		1.24	□□□□□ -2.21
HMRA2	YCR096C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	1.24	□□□□□ -2.21	not detected
HMRA2	YCR096C	SPB1	P25582	841 aa	Predicted RBP	1.24	□□□□□ -2.21
HMRA2	YCR096C	GPI10	P30777	616 aa		1.24	□□□□□ -2.21
HMRA2	YCR096C	NPL6	P32832	435 aa		1.24	□□□□□ -2.21
HMRA2	YCR096C	MST28	P39552	234 aa		1.24	□□□□□ -2.21
HMRA2	YCR096C	SPO22	P40511	975 aa		1.24	□□□□□ -2.21
HMRA2	YCR096C	LAM5	P43560	674 aa		1.24	□□□□□ -2.21
HMRA2	YCR096C	MTM1	P53320	366 aa		1.24	□□□□□ -2.21
HMRA2	YCR096C	PNG1	Q02890	363 aa		1.24	□□□□□ -2.21
HMRA2	YCR096C	MRP51	Q02950	344 aa		1.24	□□□□□ -2.21
HMRA2	YCR096C	SYF1	Q04048	859 aa	Predicted RBP	1.24	□□□□□ -2.21
HMRA2	YCR096C	RAD61	Q99359	647 aa		1.24	□□□□□ -2.21
HMRA2	YCR096C	ARG3	P05150	338 aa		1.23	□□□□□ -2.21
HMRA2	YCR096C	SLY1	P22213	666 aa		1.23	□□□□□ -2.21
HMRA2	YCR096C	PPH22	P23595	377 aa		1.23	□□□□□ -2.21
HMRA2	YCR096C	SPS22	P25380	463 aa		1.23	□□□□□ -2.21
HMRA2	YCR096C	TIP1	P27654	210 aa	Predicted RBP	1.23	□□□□□ -2.21
HMRA2	YCR096C	IDH2	P28241	369 aa	Known RBP	1.23	□□□□□ -2.21
HMRA2	YCR096C	AFG1	P32317	509 aa		1.23	□□□□□ -2.21
HMRA2	YCR096C	NIP100	P33420	868 aa		1.23	□□□□□ -2.21
HMRA2	YCR096C	PMT1	P33775	817 aa		1.23	□□□□□ -2.21
HMRA2	YCR096C	TIM17	P39515	158 aa		1.23	□□□□□ -2.21
HMRA2	YCR096C	UTP18	P40362	594 aa	Predicted RBP	1.23	□□□□□ -2.21
HMRA2	YCR096C	GAB1	P41733	394 aa		1.23	□□□□□ -2.21
HMRA2	YCR096C	YGR149W	P48236	432 aa		1.23	□□□□□ -2.21
HMRA2	YCR096C	PPM1	Q04081	328 aa		1.23	□□□□□ -2.21
HMRA2	YCR096C	YDR387C	Q04162	555 aa		1.23	□□□□□ -2.21
HMRA2	YCR096C	IRC25	Q07951	179 aa		1.23	□□□□□ -2.21
HMRA2	YCR096C	SEC39	Q12745	709 aa		1.23	□□□□□ -2.21
HMRA2	YCR096C	GCN4	P03069	281 aa		1.22	□□□□□ -2.21
HMRA2	YCR096C	ILV5	P06168	395 aa	Known RBP	1.22	□□□□□ -2.21
HMRA2	YCR096C	HXT3	P32466	567 aa	Known RBP	1.22	□□□□□ -2.21
HMRA2	YCR096C	ECM25	P32525	599 aa		1.22	□□□□□ -2.21
HMRA2	YCR096C	MET18	P40469	1032 aa		1.22	□□□□□ -2.21
HMRA2	YCR096C	TFG2	P41896	400 aa	Predicted RBP	1.22	□□□□□ -2.21
HMRA2	YCR096C	SOV1	Q04748	898 aa		1.22	□□□□□ -2.21
HMRA2	YCR096C	SIL1	Q08199	421 aa		1.22	□□□□□ -2.21
HMRA2	YCR096C	SNX3	Q08826	162 aa	Known RBP	1.22	□□□□□ -2.21
HMRA2	YCR096C	BRR1	Q99177	341 aa	Predicted RBP	1.22	□□□□□ -2.21
HMRA2	YCR096C	SEC63	P14906	663 aa		1.21	□□□□□ -2.22
HMRA2	YCR096C	RPI1	P23250	407 aa	Known RBP	1.21	□□□□□ -2.22
HMRA2	YCR096C	RAD57	P25301	460 aa		1.21	□□□□□ -2.22
HMRA2	YCR096C	GFD2	P25370	566 aa	Known RBP	1.21	□□□□□ -2.22
HMRA2	YCR096C	RAD14	P28519	371 aa		1.21	□□□□□ -2.22
HMRA2	YCR096C	APE2	P32454	952 aa	Known RBP	1.21	□□□□□ -2.22
HMRA2	YCR096C	PRP21	P32524	280 aa	Predicted RBP	1.21	□□□□□ -2.22
HMRA2	YCR096C	CSE2	P33308	149 aa		1.21	□□□□□ -2.22
HMRA2	YCR096C	SEC66	P33754	206 aa		1.21	□□□□□ -2.22
HMRA2	YCR096C	CBP4	P37267	147 aa		1.21	□□□□□ -2.22
HMRA2	YCR096C	NOP4	P37838	685 aa	Known RBP	1.21	□□□□□ -2.22
HMRA2	YCR096C	AIM10	P39965	576 aa	Known RBP	1.21	□□□□□ -2.22
HMRA2	YCR096C	SAS2	P40963	338 aa		1.21	□□□□□ -2.22
HMRA2	YCR096C	HXT14	P42833	540 aa		1.21	□□□□□ -2.22
HMRA2	YCR096C	URB2	P47108	1174 aa		1.21	□□□□□ -2.22
HMRA2	YCR096C	PHB2	P50085	310 aa		1.21	□□□□□ -2.22
HMRA2	YCR096C	TWF1	P53250	332 aa		1.21	□□□□□ -2.22
HMRA2	YCR096C	FRE4	P53746	719 aa		1.21	□□□□□ -2.22
HMRA2	YCR096C	YIF1	P53845	314 aa	Known RBP	1.21	□□□□□ -2.22
HMRA2	YCR096C	MDG1	P53885	366 aa		1.21	□□□□□ -2.22
HMRA2	YCR096C	NCS2	P53923	493 aa	Predicted RBP	1.21	□□□□□ -2.22
HMRA2	YCR096C	DIA1	P54005	336 aa		1.21	□□□□□ -2.22
HMRA2	YCR096C	RPT6	Q01939	405 aa	Known RBP	1.21	□□□□□ -2.22
HMRA2	YCR096C	IMH1	Q06704	911 aa	Known RBP	1.21	□□□□□ -2.22
HMRA2	YCR096C	TIM18	Q08749	192 aa		1.21	□□□□□ -2.22
HMRA2	YCR096C	ATG29	Q12092	213 aa		1.21	□□□□□ -2.22
HMRA2	YCR096C	PKH2	Q12236	1081 aa	Known RBP	1.21	□□□□□ -2.22
HMRA2	YCR096C	PSK1	P31374	1356 aa		1.21	□□□□□ -2.22
HMRA2	YCR096C	RHO2	P06781	192 aa		1.2	□□□□□ -2.22
HMRA2	YCR096C	RPL3	P14126	387 aa	Known RBP	1.2	□□□□□ -2.22

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms