RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 ATP2A1O14983 1001 aa14.78□□□□□ -0.04
PHGDH-221ENST00000641573 ACTN4O43707 911 aaKnown RBP14.78□□□□□ -0.04
PHGDH-221ENST00000641573 MARCH6O60337 910 aa14.78□□□□□ -0.04
PHGDH-221ENST00000641573 ZNF76P36508 570 aa14.78□□□□□ -0.04
PHGDH-221ENST00000641573 UBA7P41226 1012 aa14.78□□□□□ -0.04
PHGDH-221ENST00000641573 TECP42680 631 aa14.78□□□□□ -0.04
PHGDH-221ENST00000641573 FXR2P51116 673 aaKnown RBP eCLIP14.78□□□□□ -0.044e-8■■■□□ 17.3
PHGDH-221ENST00000641573 TMEM266Q2M3C6 531 aa14.78□□□□□ -0.04
PHGDH-221ENST00000641573 TKFCQ3LXA3 575 aa14.78□□□□□ -0.04
PHGDH-221ENST00000641573 Q4G0T1 1027 aa14.78□□□□□ -0.04
PHGDH-221ENST00000641573 GPR153Q6NV75 609 aa14.78□□□□□ -0.04
PHGDH-221ENST00000641573 KANK3Q6NY19 840 aa14.78□□□□□ -0.04
PHGDH-221ENST00000641573 FASTKD5Q7L8L6 764 aaKnown RBP14.78□□□□□ -0.04
PHGDH-221ENST00000641573 SLAIN1Q8ND83 568 aa14.78□□□□□ -0.04
PHGDH-221ENST00000641573 HAS1Q92839 578 aa14.78□□□□□ -0.04
PHGDH-221ENST00000641573 ERCC4Q92889 916 aaPredicted RBP14.78□□□□□ -0.04
PHGDH-221ENST00000641573 CCSER1Q9C0I3 900 aa14.78□□□□□ -0.04
PHGDH-221ENST00000641573 MAP3K20Q9NYL2 800 aaKnown RBP14.78□□□□□ -0.04
PHGDH-221ENST00000641573 KIAA1468Q9P260 1216 aa14.78□□□□□ -0.04
PHGDH-221ENST00000641573 HOOK1Q9UJC3 728 aaKnown RBP14.78□□□□□ -0.04
PHGDH-221ENST00000641573 ZNF214Q9UL59 606 aaPredicted RBP14.78□□□□□ -0.04
PHGDH-221ENST00000641573 AGTPBP1Q9UPW5 1226 aa14.78□□□□□ -0.04
PHGDH-221ENST00000641573 RIPK3Q9Y572 518 aa14.78□□□□□ -0.04
PHGDH-221ENST00000641573 MYH7BA7E2Y1 1941 aa14.77□□□□□ -0.04
PHGDH-221ENST00000641573 PTPRFP10586 1907 aa14.77□□□□□ -0.04
PHGDH-221ENST00000641573 CDC25AP30304 524 aa14.77□□□□□ -0.05
PHGDH-221ENST00000641573 STAT3P40763 770 aa14.77□□□□□ -0.05
PHGDH-221ENST00000641573 IRX3P78415 501 aaPredicted RBP14.77□□□□□ -0.05
PHGDH-221ENST00000641573 MOGSQ13724 837 aa14.77□□□□□ -0.05
PHGDH-221ENST00000641573 PRR16Q569H4 304 aa14.77□□□□□ -0.05
PHGDH-221ENST00000641573 CABP7Q86V35 215 aa14.77□□□□□ -0.05
PHGDH-221ENST00000641573 IGSF22Q8N9C0 903 aa14.77□□□□□ -0.05
PHGDH-221ENST00000641573 IQUBQ8NA54 791 aa14.77□□□□□ -0.05
PHGDH-221ENST00000641573 RNF214Q8ND24 703 aa14.77□□□□□ -0.05
PHGDH-221ENST00000641573 SYTL5Q8TDW5 730 aaPredicted RBP14.77□□□□□ -0.05
PHGDH-221ENST00000641573 TEX13BQ9BXU2 312 aa14.77□□□□□ -0.05
PHGDH-221ENST00000641573 KCNMB3Q9NPA1 279 aa14.77□□□□□ -0.05
PHGDH-221ENST00000641573 COL20A1Q9P218 1284 aa14.77□□□□□ -0.05
PHGDH-221ENST00000641573 CCDC39Q9UFE4 941 aa14.77□□□□□ -0.05
PHGDH-221ENST00000641573 STXBP5LQ9Y2K9 1186 aa14.77□□□□□ -0.05
PHGDH-221ENST00000641573 LAMA3Q16787 3333 aa14.77□□□□□ -0.05
PHGDH-221ENST00000641573 SMCHD1A6NHR9 2005 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 RPTORQ8N122 1335 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 FAM86B1E9PN63 330 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 PDHXO00330 501 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 SGPL1O95470 568 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 TFRCP02786 760 aaKnown RBP14.76□□□□□ -0.05
PHGDH-221ENST00000641573 FAM86B2P0C5J1 330 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 SLFN14P0C7P3 912 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 XRCC6P12956 609 aaKnown RBP eCLIP14.76□□□□□ -0.055e-6■■□□□ 11.5
PHGDH-221ENST00000641573 CAPN2P17655 700 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 CTGFP29279 349 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 FCGRTP55899 365 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 MDM2Q00987 491 aaPredicted RBP14.76□□□□□ -0.05
PHGDH-221ENST00000641573 PRKCZQ05513 592 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 PABPC4Q13310 644 aaKnown RBP eCLIP14.76□□□□□ -0.05
PHGDH-221ENST00000641573 PNOCQ13519 176 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 PDIA5Q14554 519 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 PLS1Q14651 629 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 KARSQ15046 597 aaKnown RBP14.76□□□□□ -0.05
PHGDH-221ENST00000641573 E2F4Q16254 413 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 STX1AQ16623 288 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 NSMFQ6X4W1 530 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 LBX2Q6XYB7 198 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 RNF207Q6ZRF8 634 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 ANKRD23Q86SG2 305 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 SLFN12Q8IYM2 578 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 CEP57L1Q8IYX8 460 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 LENG9Q96B70 501 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 CCDC34Q96HJ3 373 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 RAB34Q9BZG1 259 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 UNC93B1Q9H1C4 597 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 ASCC2Q9H1I8 757 aaPredicted RBP14.76□□□□□ -0.05
PHGDH-221ENST00000641573 TTC12Q9H892 705 aaPredicted RBP14.76□□□□□ -0.05
PHGDH-221ENST00000641573 LRWD1Q9UFC0 647 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 RABGAP1Q9Y3P9 1069 aa14.76□□□□□ -0.05
PHGDH-221ENST00000641573 TBX3O15119 743 aa14.75□□□□□ -0.05
PHGDH-221ENST00000641573 PRR29P0C7W0 189 aa14.75□□□□□ -0.05
PHGDH-221ENST00000641573 RPS6P62753 249 aaKnown RBP14.75□□□□□ -0.05
PHGDH-221ENST00000641573 POSTNQ15063 836 aa14.75□□□□□ -0.05
PHGDH-221ENST00000641573 ANO6Q4KMQ2 910 aa14.75□□□□□ -0.05
PHGDH-221ENST00000641573 RRAGBQ5VZM2 374 aa14.75□□□□□ -0.05
PHGDH-221ENST00000641573 GPAT2Q6NUI2 795 aa14.75□□□□□ -0.05
PHGDH-221ENST00000641573 SLC30A10Q6XR72 485 aa14.75□□□□□ -0.05
PHGDH-221ENST00000641573 SH3RF1Q7Z6J0 888 aa14.75□□□□□ -0.05
PHGDH-221ENST00000641573 MB21D1Q8N884 522 aa14.75□□□□□ -0.05
PHGDH-221ENST00000641573 RASSF8Q8NHQ8 419 aa14.75□□□□□ -0.05
PHGDH-221ENST00000641573 ETNPPLQ8TBG4 499 aa14.75□□□□□ -0.05
PHGDH-221ENST00000641573 GJA10Q969M2 543 aa14.75□□□□□ -0.05
PHGDH-221ENST00000641573 PAGE5Q96GU1 130 aa14.75□□□□□ -0.05
PHGDH-221ENST00000641573 TAAR1Q96RJ0 339 aa14.75□□□□□ -0.05
PHGDH-221ENST00000641573 DISC1Q9NRI5 854 aa14.75□□□□□ -0.05
PHGDH-221ENST00000641573 TUBE1Q9UJT0 475 aa14.75□□□□□ -0.05
PHGDH-221ENST00000641573 PCDHA12Q9UN75 941 aa14.75□□□□□ -0.05
PHGDH-221ENST00000641573 IGLV3-22A0A075B6J6 115 aa14.74□□□□□ -0.05
PHGDH-221ENST00000641573 MSH4O15457 936 aa14.74□□□□□ -0.05
PHGDH-221ENST00000641573 STAT6P42226 847 aa14.74□□□□□ -0.05
PHGDH-221ENST00000641573 AFMP43652 599 aa14.74□□□□□ -0.05
PHGDH-221ENST00000641573 HERVK_113P62684 666 aa14.74□□□□□ -0.05
PHGDH-221ENST00000641573 BAATQ14032 418 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms