RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 ELF3P78545 371 aaPredicted RBP15.12■□□□□ 0.01
SCARB2-227ENST00000640957 RNF26Q9BY78 433 aaPredicted RBP15.12■□□□□ 0.01
SCARB2-227ENST00000640957 VAT1LQ9HCJ6 419 aa15.12■□□□□ 0.01
SCARB2-227ENST00000640957 WDR19Q8NEZ3 1342 aa15.12■□□□□ 0.01
SCARB2-227ENST00000640957 A0A1W2PQC6 194 aa15.11■□□□□ 0.01
SCARB2-227ENST00000640957 C21orf2O43822 256 aa15.11■□□□□ 0.01
SCARB2-227ENST00000640957 ANP32DO95626 131 aa15.11■□□□□ 0.01
SCARB2-227ENST00000640957 ATP6V1G2O95670 118 aa15.11■□□□□ 0.01
SCARB2-227ENST00000640957 CDC37Q16543 378 aaPredicted RBP15.11■□□□□ 0.01
SCARB2-227ENST00000640957 LETM2Q2VYF4 491 aa15.11■□□□□ 0.01
SCARB2-227ENST00000640957 GKAP1Q5VSY0 366 aaPredicted RBP15.11■□□□□ 0.01
SCARB2-227ENST00000640957 SLC17A8Q8NDX2 589 aa15.11■□□□□ 0.01
SCARB2-227ENST00000640957 NDST4Q9H3R1 872 aa15.11■□□□□ 0.01
SCARB2-227ENST00000640957 TMBIM4Q9HC24 238 aa15.11■□□□□ 0.01
SCARB2-227ENST00000640957 C4AP0C0L4 1744 aa15.11■□□□□ 0.01
SCARB2-227ENST00000640957 C4BP0C0L5 1744 aa15.11■□□□□ 0.01
SCARB2-227ENST00000640957 ZSCAN10Q96SZ4 725 aaPredicted RBP15.11■□□□□ 0.01
SCARB2-227ENST00000640957 TRIM51Q9BSJ1 452 aa15.11■□□□□ 0.01
SCARB2-227ENST00000640957 NUP58Q9BVL2 599 aa15.11■□□□□ 0.01
SCARB2-227ENST00000640957 SEMA6BQ9H3T3 888 aa15.11■□□□□ 0.01
SCARB2-227ENST00000640957 MED1Q15648 1581 aaPredicted RBP15.11■□□□□ 0.01
SCARB2-227ENST00000640957 PPP1R12AO14974 1030 aaPredicted RBP15.11■□□□□ 0.01
SCARB2-227ENST00000640957 SHBGP04278 402 aa15.11■□□□□ 0.01
SCARB2-227ENST00000640957 CYP2D6P10635 497 aa15.11■□□□□ 0.01
SCARB2-227ENST00000640957 WLSQ5T9L3 541 aa15.11■□□□□ 0.01
SCARB2-227ENST00000640957 NELFCDQ8IXH7 590 aa15.11■□□□□ 0.01
SCARB2-227ENST00000640957 FAM133AQ8N9E0 248 aa15.11■□□□□ 0.01
SCARB2-227ENST00000640957 ESR2Q92731 530 aa15.11■□□□□ 0.01
SCARB2-227ENST00000640957 TSGA10Q9BZW7 698 aa15.11■□□□□ 0.01
SCARB2-227ENST00000640957 MYH6P13533 1939 aa15.11■□□□□ 0.01
SCARB2-227ENST00000640957 TRAPPC3O43617 180 aa15.1■□□□□ 0.01
SCARB2-227ENST00000640957 RAD21O60216 631 aa15.1■□□□□ 0.01
SCARB2-227ENST00000640957 TXNRD1Q16881 649 aa15.1■□□□□ 0.01
SCARB2-227ENST00000640957 HEATR3Q7Z4Q2 680 aa15.1■□□□□ 0.01
SCARB2-227ENST00000640957 STAG2Q8N3U4 1231 aa15.1■□□□□ 0.01
SCARB2-227ENST00000640957 GDF3Q9NR23 364 aa15.1■□□□□ 0.01
SCARB2-227ENST00000640957 PLAGL2Q9UPG8 496 aa15.1■□□□□ 0.01
SCARB2-227ENST00000640957 CCDC194A0A1B0GVG4 234 aa15.1■□□□□ 0.01
SCARB2-227ENST00000640957 OTUD6AQ7L8S5 288 aa15.1■□□□□ 0.01
SCARB2-227ENST00000640957 CCDC63Q8NA47 563 aa15.1■□□□□ 0.01
SCARB2-227ENST00000640957 LMBR1Q8WVP7 490 aa15.1■□□□□ 0.01
SCARB2-227ENST00000640957 RSRC1Q96IZ7 334 aaKnown RBP15.1■□□□□ 0.01
SCARB2-227ENST00000640957 ZHX3Q9H4I2 956 aa15.1■□□□□ 0.01
SCARB2-227ENST00000640957 THAP9Q9H5L6 903 aa15.1■□□□□ 0.01
SCARB2-227ENST00000640957 A0A087X0T9 212 aa15.09■□□□□ 0.01
SCARB2-227ENST00000640957 TTI1O43156 1089 aa15.09■□□□□ 0.01
SCARB2-227ENST00000640957 FAM228BP0C875 321 aa15.09■□□□□ 0.01
SCARB2-227ENST00000640957 CYP19A1P11511 503 aaPredicted RBP15.09■□□□□ 0.01
SCARB2-227ENST00000640957 AGAP11Q8TF27 550 aa15.09■□□□□ 0.01
SCARB2-227ENST00000640957 STAG1Q8WVM7 1258 aa15.09■□□□□ 0.01
SCARB2-227ENST00000640957 HMGB1P1B2RPK0 211 aaPredicted RBP15.09■□□□□ 0.01
SCARB2-227ENST00000640957 F8W031 263 aaPredicted RBP15.09■□□□□ 0.01
SCARB2-227ENST00000640957 CAND2O75155 1236 aa15.09■□□□□ 0.01
SCARB2-227ENST00000640957 CRKLP46109 303 aaKnown RBP15.09■□□□□ 0.01
SCARB2-227ENST00000640957 FUT2Q10981 343 aa15.09■□□□□ 0.01
SCARB2-227ENST00000640957 CCDC152Q4G0S7 254 aa15.09■□□□□ 0.01
SCARB2-227ENST00000640957 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.09■□□□□ 0.01
SCARB2-227ENST00000640957 SPIRE2Q8WWL2 714 aa15.09■□□□□ 0.01
SCARB2-227ENST00000640957 A1CFQ9NQ94 594 aaKnown RBP15.09■□□□□ 0.01
SCARB2-227ENST00000640957 ABCF3Q9NUQ8 709 aa15.09■□□□□ 0.01
SCARB2-227ENST00000640957 AGAP1Q9UPQ3 857 aa15.09■□□□□ 0.01
SCARB2-227ENST00000640957 MYO5AQ9Y4I1 1855 aaKnown RBP15.09■□□□□ 0.01
SCARB2-227ENST00000640957 MAGEB6P1A0A0J9YX57 407 aa15.09■□□□□ 0.01
SCARB2-227ENST00000640957 USP17L12C9JPN9 530 aa15.09■□□□□ 0.01
SCARB2-227ENST00000640957 USP17L21D6R901 530 aa15.09■□□□□ 0.01
SCARB2-227ENST00000640957 CSF1RP07333 972 aa15.09■□□□□ 0.01
SCARB2-227ENST00000640957 PPP2R2AP63151 447 aa15.09■□□□□ 0.01
SCARB2-227ENST00000640957 RNASELQ05823 741 aaKnown RBP15.09■□□□□ 0.01
SCARB2-227ENST00000640957 CHRNDQ07001 517 aa15.09■□□□□ 0.01
SCARB2-227ENST00000640957 TAF4BQ92750 862 aa15.09■□□□□ 0.01
SCARB2-227ENST00000640957 CALR3Q96L12 384 aaKnown RBP15.09■□□□□ 0.01
SCARB2-227ENST00000640957 ARHGEF10LQ9HCE6 1279 aa15.09■□□□□ 0.01
SCARB2-227ENST00000640957 FAM98CQ17RN3 349 aaKnown RBP15.08■□□□□ 0
SCARB2-227ENST00000640957 GIMAP8Q8ND71 665 aaPredicted RBP15.08■□□□□ 0
SCARB2-227ENST00000640957 SART1O43290 800 aaKnown RBP15.08■□□□□ 0
SCARB2-227ENST00000640957 ACTN1P12814 892 aa15.08■□□□□ 0
SCARB2-227ENST00000640957 CCNE1P24864 410 aa15.08■□□□□ 0
SCARB2-227ENST00000640957 TXKP42681 527 aa15.08■□□□□ 0
SCARB2-227ENST00000640957 SEC23AQ15436 765 aa15.08■□□□□ 0
SCARB2-227ENST00000640957 ZKSCAN8Q15776 578 aaPredicted RBP15.08■□□□□ 0
SCARB2-227ENST00000640957 GNPTABQ3T906 1256 aa15.08■□□□□ 0
SCARB2-227ENST00000640957 VWA3BQ502W6 1294 aa15.08■□□□□ 0
SCARB2-227ENST00000640957 EGFL6Q8IUX8 553 aa15.08■□□□□ 0
SCARB2-227ENST00000640957 KIAA0895Q8NCT3 520 aa15.08■□□□□ 0
SCARB2-227ENST00000640957 SPDYE1Q8NFV5 336 aaPredicted RBP15.08■□□□□ 0
SCARB2-227ENST00000640957 SLC12A6Q9UHW9 1150 aa15.08■□□□□ 0
SCARB2-227ENST00000640957 NR2E1Q9Y466 385 aa15.08■□□□□ 0
SCARB2-227ENST00000640957 SCG2P13521 617 aa15.07■□□□□ 0
SCARB2-227ENST00000640957 BRD2P25440 801 aaKnown RBP15.07■□□□□ 0
SCARB2-227ENST00000640957 IFI35P80217 286 aaPredicted RBP15.07■□□□□ 0
SCARB2-227ENST00000640957 TROAPQ12815 778 aa15.07■□□□□ 0
SCARB2-227ENST00000640957 LRRC34Q8IZ02 419 aa15.07■□□□□ 0
SCARB2-227ENST00000640957 CUL5Q93034 780 aa15.07■□□□□ 0
SCARB2-227ENST00000640957 TNFRSF25Q93038 417 aa15.07■□□□□ 0
SCARB2-227ENST00000640957 TAF1DQ9H5J8 278 aaPredicted RBP15.07■□□□□ 0
SCARB2-227ENST00000640957 AFDNP55196 1824 aaKnown RBP15.07■□□□□ 0
SCARB2-227ENST00000640957 PRPF3O43395 683 aaKnown RBP15.07■□□□□ 0
SCARB2-227ENST00000640957 TRIM37O94972 964 aa15.07■□□□□ 0
SCARB2-227ENST00000640957 CHN1P15882 459 aa15.07■□□□□ 0
SCARB2-227ENST00000640957 CRYMQ14894 314 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms