RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-222ENST00000640634 SREBF1P36956 1147 aa12.49□□□□□ -0.41
SCARB2-222ENST00000640634 ARHGAP4P98171 946 aa12.49□□□□□ -0.41
SCARB2-222ENST00000640634 AP3B2Q13367 1082 aa12.49□□□□□ -0.41
SCARB2-222ENST00000640634 STXBP2Q15833 593 aa12.49□□□□□ -0.41
SCARB2-222ENST00000640634 PCNX4Q63HM2 1172 aa12.49□□□□□ -0.41
SCARB2-222ENST00000640634 SAMD3Q8N6K7 520 aa12.49□□□□□ -0.41
SCARB2-222ENST00000640634 U2AF1L4Q8WU68 220 aaKnown RBP12.49□□□□□ -0.41
SCARB2-222ENST00000640634 SPATA32Q96LK8 384 aa12.49□□□□□ -0.41
SCARB2-222ENST00000640634 IWS1Q96ST2 819 aa12.49□□□□□ -0.41
SCARB2-222ENST00000640634 WDR11Q9BZH6 1224 aa12.49□□□□□ -0.41
SCARB2-222ENST00000640634 VTA1Q9NP79 307 aa12.49□□□□□ -0.41
SCARB2-222ENST00000640634 PKD2L1Q9P0L9 805 aa12.49□□□□□ -0.41
SCARB2-222ENST00000640634 DDX20Q9UHI6 824 aaKnown RBP12.49□□□□□ -0.41
SCARB2-222ENST00000640634 DOCK5Q9H7D0 1870 aa12.49□□□□□ -0.41
SCARB2-222ENST00000640634 FAM86B1E9PN63 330 aa12.48□□□□□ -0.41
SCARB2-222ENST00000640634 PGK1P00558 417 aa12.48□□□□□ -0.41
SCARB2-222ENST00000640634 FAM86B2P0C5J1 330 aa12.48□□□□□ -0.41
SCARB2-222ENST00000640634 EN2P19622 333 aaPredicted RBP12.48□□□□□ -0.41
SCARB2-222ENST00000640634 KRT2P35908 639 aa12.48□□□□□ -0.41
SCARB2-222ENST00000640634 SP2Q02086 613 aa12.48□□□□□ -0.41
SCARB2-222ENST00000640634 LY6KQ17RY6 165 aa12.48□□□□□ -0.41
SCARB2-222ENST00000640634 INF2Q27J81 1249 aa12.48□□□□□ -0.41
SCARB2-222ENST00000640634 IFFO2Q5TF58 517 aa12.48□□□□□ -0.41
SCARB2-222ENST00000640634 PIK3AP1Q6ZUJ8 805 aa12.48□□□□□ -0.41
SCARB2-222ENST00000640634 FBXO18Q8NFZ0 1043 aa12.48□□□□□ -0.41
SCARB2-222ENST00000640634 TBCKQ8TEA7 893 aa12.48□□□□□ -0.41
SCARB2-222ENST00000640634 MAF1Q9H063 256 aa12.48□□□□□ -0.41
SCARB2-222ENST00000640634 EIF3JO75822 258 aaKnown RBP12.48□□□□□ -0.41
SCARB2-222ENST00000640634 TDP2O95551 362 aa12.48□□□□□ -0.41
SCARB2-222ENST00000640634 AKR1A1P14550 325 aa12.48□□□□□ -0.41
SCARB2-222ENST00000640634 XBP1P17861 261 aa12.48□□□□□ -0.41
SCARB2-222ENST00000640634 TNFAIP2Q03169 654 aa12.48□□□□□ -0.41
SCARB2-222ENST00000640634 TRIM29Q14134 588 aa12.48□□□□□ -0.41
SCARB2-222ENST00000640634 CCDC62Q6P9F0 684 aa12.48□□□□□ -0.41
SCARB2-222ENST00000640634 BICD2Q8TD16 824 aa12.48□□□□□ -0.41
SCARB2-222ENST00000640634 DIS3LQ8TF46 1054 aaKnown RBP12.48□□□□□ -0.41
SCARB2-222ENST00000640634 GJA10Q969M2 543 aa12.48□□□□□ -0.41
SCARB2-222ENST00000640634 INPP4AQ96PE3 977 aaPredicted RBP12.48□□□□□ -0.41
SCARB2-222ENST00000640634 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.48□□□□□ -0.41
SCARB2-222ENST00000640634 SYNRGQ9UMZ2 1314 aa12.48□□□□□ -0.41
SCARB2-222ENST00000640634 ATP9AO75110 1047 aa12.47□□□□□ -0.41
SCARB2-222ENST00000640634 FOSP01100 380 aaPredicted RBP12.47□□□□□ -0.41
SCARB2-222ENST00000640634 GJB1P08034 283 aa12.47□□□□□ -0.41
SCARB2-222ENST00000640634 MNX1P50219 401 aaPredicted RBP12.47□□□□□ -0.41
SCARB2-222ENST00000640634 BEX3Q00994 111 aa12.47□□□□□ -0.41
SCARB2-222ENST00000640634 GLT8D2Q9H1C3 349 aa12.47□□□□□ -0.41
SCARB2-222ENST00000640634 FAM184BQ9ULE4 1060 aa12.47□□□□□ -0.41
SCARB2-222ENST00000640634 GNEQ9Y223 722 aaKnown RBP12.47□□□□□ -0.41
SCARB2-222ENST00000640634 UBIAD1Q9Y5Z9 338 aa12.47□□□□□ -0.41
SCARB2-222ENST00000640634 IGLV3-22A0A075B6J6 115 aa12.46□□□□□ -0.41
SCARB2-222ENST00000640634 LOC102724159A0A0B4J2E5 919 aa12.46□□□□□ -0.41
SCARB2-222ENST00000640634 RBM47A0AV96 593 aaKnown RBP12.46□□□□□ -0.41
SCARB2-222ENST00000640634 CTAGE5O15320 804 aa12.46□□□□□ -0.41
SCARB2-222ENST00000640634 SGPL1O95470 568 aa12.46□□□□□ -0.41
SCARB2-222ENST00000640634 ARP10275 920 aa12.46□□□□□ -0.41
SCARB2-222ENST00000640634 TXNP10599 105 aaKnown RBP12.46□□□□□ -0.41
SCARB2-222ENST00000640634 UBA1P22314 1058 aaKnown RBP12.46□□□□□ -0.41
SCARB2-222ENST00000640634 PWP2Q15269 919 aaKnown RBP12.46□□□□□ -0.41
SCARB2-222ENST00000640634 SND1Q7KZF4 910 aaKnown RBP eCLIP12.46□□□□□ -0.412e-6■■□□□ 13.9
SCARB2-222ENST00000640634 SCFD2Q8WU76 684 aa12.46□□□□□ -0.41
SCARB2-222ENST00000640634 LENG9Q96B70 501 aa12.46□□□□□ -0.41
SCARB2-222ENST00000640634 MPHOSPH6Q99547 160 aaKnown RBP12.46□□□□□ -0.41
SCARB2-222ENST00000640634 CRISPLD2Q9H0B8 497 aa12.46□□□□□ -0.41
SCARB2-222ENST00000640634 XPNPEP3Q9NQH7 507 aa12.46□□□□□ -0.41
SCARB2-222ENST00000640634 NRBP1Q9UHY1 535 aa12.46□□□□□ -0.41
SCARB2-222ENST00000640634 MRVI1Q9Y6F6 885 aa12.46□□□□□ -0.41
SCARB2-222ENST00000640634 TNRC18O15417 2968 aaPredicted RBP12.46□□□□□ -0.42
SCARB2-222ENST00000640634 CCDC194A0A1B0GVG4 234 aa12.45□□□□□ -0.42
SCARB2-222ENST00000640634 ADAMTS4O75173 837 aa12.45□□□□□ -0.42
SCARB2-222ENST00000640634 RARBP10826 455 aa12.45□□□□□ -0.42
SCARB2-222ENST00000640634 GJA8P48165 433 aa12.45□□□□□ -0.42
SCARB2-222ENST00000640634 NUBP1P53384 320 aa12.45□□□□□ -0.42
SCARB2-222ENST00000640634 PKP1Q13835 747 aa12.45□□□□□ -0.42
SCARB2-222ENST00000640634 NONOQ15233 471 aaKnown RBP eCLIP12.45□□□□□ -0.42
SCARB2-222ENST00000640634 DUSP28Q4G0W2 176 aa12.45□□□□□ -0.42
SCARB2-222ENST00000640634 LARP1BQ659C4 914 aaKnown RBP12.45□□□□□ -0.42
SCARB2-222ENST00000640634 GALNT17Q6IS24 598 aa12.45□□□□□ -0.42
SCARB2-222ENST00000640634 KRT25Q7Z3Z0 450 aa12.45□□□□□ -0.42
SCARB2-222ENST00000640634 TLK2Q86UE8 772 aa12.45□□□□□ -0.42
SCARB2-222ENST00000640634 PPP1R13LQ8WUF5 828 aa12.45□□□□□ -0.42
SCARB2-222ENST00000640634 INTS4Q96HW7 963 aaKnown RBP12.45□□□□□ -0.42
SCARB2-222ENST00000640634 MXRA8Q9BRK3 442 aa12.45□□□□□ -0.42
SCARB2-222ENST00000640634 TMEM106CQ9BVX2 250 aa12.45□□□□□ -0.42
SCARB2-222ENST00000640634 PCDH10Q9P2E7 1040 aa12.45□□□□□ -0.42
SCARB2-222ENST00000640634 DDX41Q9UJV9 622 aaKnown RBP12.45□□□□□ -0.42
SCARB2-222ENST00000640634 VPS37CA5D8V6 355 aaPredicted RBP12.45□□□□□ -0.42
SCARB2-222ENST00000640634 SPATA31C2B4DYI2 1134 aa12.45□□□□□ -0.42
SCARB2-222ENST00000640634 DYNC1LI2O43237 492 aaPredicted RBP12.45□□□□□ -0.42
SCARB2-222ENST00000640634 SLC37A4O43826 429 aa12.45□□□□□ -0.42
SCARB2-222ENST00000640634 ATP2B1P20020 1258 aa12.45□□□□□ -0.42
SCARB2-222ENST00000640634 SYT1P21579 422 aa12.45□□□□□ -0.42
SCARB2-222ENST00000640634 SP4Q02446 784 aa12.45□□□□□ -0.42
SCARB2-222ENST00000640634 ARHGAP1Q07960 439 aa12.45□□□□□ -0.42
SCARB2-222ENST00000640634 ITGB3BPQ13352 177 aaPredicted RBP12.45□□□□□ -0.42
SCARB2-222ENST00000640634 MTMR1Q13613 665 aa12.45□□□□□ -0.42
SCARB2-222ENST00000640634 LETM2Q2VYF4 491 aa12.45□□□□□ -0.42
SCARB2-222ENST00000640634 CEP55Q53EZ4 464 aa12.45□□□□□ -0.42
SCARB2-222ENST00000640634 PRR16Q569H4 304 aa12.45□□□□□ -0.42
SCARB2-222ENST00000640634 MCTP1Q6DN14 999 aa12.45□□□□□ -0.42
SCARB2-222ENST00000640634 FERMT3Q86UX7 667 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms