RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 C8orf34Q49A92 452 aa16.07■□□□□ 0.16
HLA-C-210ENST00000640219 ZNF618Q5T7W0 954 aa16.07■□□□□ 0.16
HLA-C-210ENST00000640219 CWC27Q6UX04 472 aaKnown RBP16.07■□□□□ 0.16
HLA-C-210ENST00000640219 FBXL6Q8N531 539 aa16.07■□□□□ 0.16
HLA-C-210ENST00000640219 AFG1LQ8WV93 481 aa16.07■□□□□ 0.16
HLA-C-210ENST00000640219 HELLSQ9NRZ9 838 aa16.07■□□□□ 0.16
HLA-C-210ENST00000640219 GTF2IRD1Q9UHL9 959 aa16.07■□□□□ 0.16
HLA-C-210ENST00000640219 PLIN4Q96Q06 1357 aa16.07■□□□□ 0.16
HLA-C-210ENST00000640219 LAMA4Q16363 1823 aa16.07■□□□□ 0.16
HLA-C-210ENST00000640219 C5orf42Q9H799 3197 aa16.07■□□□□ 0.16
HLA-C-210ENST00000640219 CCDC171Q6TFL3 1326 aa16.06■□□□□ 0.16
HLA-C-210ENST00000640219 ARIH2O95376 493 aa16.06■□□□□ 0.16
HLA-C-210ENST00000640219 TFAP4Q01664 338 aa16.06■□□□□ 0.16
HLA-C-210ENST00000640219 DLX2Q07687 328 aaPredicted RBP16.06■□□□□ 0.16
HLA-C-210ENST00000640219 PTK7Q13308 1070 aa16.06■□□□□ 0.16
HLA-C-210ENST00000640219 MBTPS1Q14703 1052 aa16.06■□□□□ 0.16
HLA-C-210ENST00000640219 MCMDC2Q4G0Z9 681 aa16.06■□□□□ 0.16
HLA-C-210ENST00000640219 TTC22Q5TAA0 569 aa16.06■□□□□ 0.16
HLA-C-210ENST00000640219 TRAF7Q6Q0C0 670 aa16.06■□□□□ 0.16
HLA-C-210ENST00000640219 SLC30A10Q6XR72 485 aa16.06■□□□□ 0.16
HLA-C-210ENST00000640219 RASGRP2Q7LDG7 609 aa16.06■□□□□ 0.16
HLA-C-210ENST00000640219 FBXO11Q86XK2 927 aa16.06■□□□□ 0.16
HLA-C-210ENST00000640219 C7orf31Q8N865 590 aa16.06■□□□□ 0.16
HLA-C-210ENST00000640219 DBF4BQ8NFT6 615 aa16.06■□□□□ 0.16
HLA-C-210ENST00000640219 KAT2BQ92831 832 aa16.06■□□□□ 0.16
HLA-C-210ENST00000640219 ATOH1Q92858 354 aaPredicted RBP16.06■□□□□ 0.16
HLA-C-210ENST00000640219 YME1L1Q96TA2 773 aa16.06■□□□□ 0.16
HLA-C-210ENST00000640219 IRF2BPLQ9H1B7 796 aa16.06■□□□□ 0.16
HLA-C-210ENST00000640219 HDAC6Q9UBN7 1215 aa16.06■□□□□ 0.16
HLA-C-210ENST00000640219 NMT2O60551 498 aa16.05■□□□□ 0.16
HLA-C-210ENST00000640219 MMP3P08254 477 aa16.05■□□□□ 0.16
HLA-C-210ENST00000640219 HSPD1P10809 573 aaKnown RBP16.05■□□□□ 0.16
HLA-C-210ENST00000640219 CASTP20810 708 aaKnown RBP16.05■□□□□ 0.16
HLA-C-210ENST00000640219 EDNRBP24530 442 aa16.05■□□□□ 0.16
HLA-C-210ENST00000640219 MKRN4PQ13434 485 aaPredicted RBP16.05■□□□□ 0.16
HLA-C-210ENST00000640219 SMAD4Q13485 552 aaKnown RBP16.05■□□□□ 0.16
HLA-C-210ENST00000640219 TRIM71Q2Q1W2 868 aaKnown RBP16.05■□□□□ 0.16
HLA-C-210ENST00000640219 NACAP1Q9BZK3 213 aa16.05■□□□□ 0.16
HLA-C-210ENST00000640219 RANBP17Q9H2T7 1088 aaKnown RBP16.05■□□□□ 0.16
HLA-C-210ENST00000640219 UPF2Q9HAU5 1272 aaKnown RBP16.05■□□□□ 0.16
HLA-C-210ENST00000640219 EMSYQ7Z589 1322 aa16.04■□□□□ 0.16
HLA-C-210ENST00000640219 FGAP02671 866 aa16.04■□□□□ 0.16
HLA-C-210ENST00000640219 ZXDAP98168 799 aa16.04■□□□□ 0.16
HLA-C-210ENST00000640219 HYAL1Q12794 435 aa16.04■□□□□ 0.16
HLA-C-210ENST00000640219 RNF207Q6ZRF8 634 aa16.04■□□□□ 0.16
HLA-C-210ENST00000640219 DNERQ8NFT8 737 aa16.04■□□□□ 0.16
HLA-C-210ENST00000640219 WNT8BQ93098 351 aa16.04■□□□□ 0.16
HLA-C-210ENST00000640219 ALG1Q9BT22 464 aa16.04■□□□□ 0.16
HLA-C-210ENST00000640219 ALG13Q9NP73 1137 aaKnown RBP16.04■□□□□ 0.16
HLA-C-210ENST00000640219 DIAPH3Q9NSV4 1193 aa16.04■□□□□ 0.16
HLA-C-210ENST00000640219 STX8Q9UNK0 236 aa16.04■□□□□ 0.16
HLA-C-210ENST00000640219 MTMR7Q9Y216 660 aa16.04■□□□□ 0.16
HLA-C-210ENST00000640219 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.04■□□□□ 0.16
HLA-C-210ENST00000640219 B4DLN1 442 aa16.03■□□□□ 0.16
HLA-C-210ENST00000640219 UPP2O95045 317 aa16.03■□□□□ 0.16
HLA-C-210ENST00000640219 GH1P01241 217 aa16.03■□□□□ 0.16
HLA-C-210ENST00000640219 SLC16A2P36021 539 aa16.03■□□□□ 0.16
HLA-C-210ENST00000640219 PSEN2P49810 448 aa16.03■□□□□ 0.16
HLA-C-210ENST00000640219 MRPL12P52815 198 aaKnown RBP16.03■□□□□ 0.16
HLA-C-210ENST00000640219 CCDC96Q2M329 555 aa16.03■□□□□ 0.16
HLA-C-210ENST00000640219 PPP4R3BQ5MIZ7 849 aa16.03■□□□□ 0.16
HLA-C-210ENST00000640219 CCDC62Q6P9F0 684 aa16.03■□□□□ 0.16
HLA-C-210ENST00000640219 CHST3Q7LGC8 479 aa16.03■□□□□ 0.16
HLA-C-210ENST00000640219 TBC1D10CQ8IV04 446 aa16.03■□□□□ 0.16
HLA-C-210ENST00000640219 CLEC4DQ8WXI8 215 aa16.03■□□□□ 0.16
HLA-C-210ENST00000640219 TOP1MTQ969P6 601 aa16.03■□□□□ 0.16
HLA-C-210ENST00000640219 CD207Q9UJ71 328 aa16.03■□□□□ 0.16
HLA-C-210ENST00000640219 SPTBN4Q9H254 2564 aa16.02■□□□□ 0.16
HLA-C-210ENST00000640219 VCPP55072 806 aaKnown RBP16.02■□□□□ 0.16
HLA-C-210ENST00000640219 RPS6P62753 249 aaKnown RBP16.02■□□□□ 0.16
HLA-C-210ENST00000640219 ARHGAP1Q07960 439 aa16.02■□□□□ 0.16
HLA-C-210ENST00000640219 BECN1Q14457 450 aa16.02■□□□□ 0.16
HLA-C-210ENST00000640219 DGKDQ16760 1214 aa16.02■□□□□ 0.16
HLA-C-210ENST00000640219 LY6KQ17RY6 165 aa16.02■□□□□ 0.16
HLA-C-210ENST00000640219 PLEKHG4Q58EX7 1191 aa16.02■□□□□ 0.16
HLA-C-210ENST00000640219 RRP12Q5JTH9 1297 aaKnown RBP16.02■□□□□ 0.16
HLA-C-210ENST00000640219 TTBK2Q6IQ55 1244 aa16.02■□□□□ 0.16
HLA-C-210ENST00000640219 ERMP1Q7Z2K6 904 aa16.02■□□□□ 0.16
HLA-C-210ENST00000640219 KATNAL1Q9BW62 490 aa16.02■□□□□ 0.16
HLA-C-210ENST00000640219 LMAN2LQ9H0V9 348 aa16.02■□□□□ 0.16
HLA-C-210ENST00000640219 IGFLR1Q9H665 355 aa16.02■□□□□ 0.16
HLA-C-210ENST00000640219 MICAL3Q7RTP6 2002 aa16.02■□□□□ 0.15
HLA-C-210ENST00000640219 KMT2EQ8IZD2 1858 aa16.01■□□□□ 0.15
HLA-C-210ENST00000640219 RSPH10B2B2RC85 870 aa16.01■□□□□ 0.15
HLA-C-210ENST00000640219 TBX10O75333 385 aa16.01■□□□□ 0.15
HLA-C-210ENST00000640219 SLC3A2P08195 630 aaKnown RBP16.01■□□□□ 0.15
HLA-C-210ENST00000640219 RSPH10BP0C881 870 aa16.01■□□□□ 0.15
HLA-C-210ENST00000640219 CTNNB1P35222 781 aa16.01■□□□□ 0.15
HLA-C-210ENST00000640219 ZNF200P98182 395 aaPredicted RBP16.01■□□□□ 0.15
HLA-C-210ENST00000640219 MFSD10Q14728 455 aa16.01■□□□□ 0.15
HLA-C-210ENST00000640219 SYDE2Q5VT97 1194 aa16.01■□□□□ 0.15
HLA-C-210ENST00000640219 TOMM22Q9NS69 142 aa16.01■□□□□ 0.15
HLA-C-210ENST00000640219 NEDD4P46934 1319 aa16■□□□□ 0.15
HLA-C-210ENST00000640219 LINC01565O15544 149 aa16■□□□□ 0.15
HLA-C-210ENST00000640219 AVPR2P30518 371 aa16■□□□□ 0.15
HLA-C-210ENST00000640219 GTF2F1P35269 517 aaKnown RBP eCLIP16■□□□□ 0.15
HLA-C-210ENST00000640219 KIAA0753Q2KHM9 967 aa16■□□□□ 0.15
HLA-C-210ENST00000640219 BTNL9Q6UXG8 535 aa16■□□□□ 0.15
HLA-C-210ENST00000640219 SEPT14Q6ZU15 432 aa16■□□□□ 0.15
HLA-C-210ENST00000640219 DCAF4Q8WV16 495 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms