RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 PHOSPHO2Q8TCD6 241 aa19.54■□□□□ 0.72
SMN2-216ENST00000638794 ZFP91Q96JP5 570 aaPredicted RBP19.54■□□□□ 0.72
SMN2-216ENST00000638794 PNMA6FA0A0J9YX94 578 aa19.53■□□□□ 0.72
SMN2-216ENST00000638794 BAIAP3O94812 1187 aa19.53■□□□□ 0.72
SMN2-216ENST00000638794 GGPS1O95749 300 aa19.53■□□□□ 0.72
SMN2-216ENST00000638794 UBA1P22314 1058 aaKnown RBP19.53■□□□□ 0.72
SMN2-216ENST00000638794 CCND2P30279 289 aa19.53■□□□□ 0.72
SMN2-216ENST00000638794 SP2Q02086 613 aa19.53■□□□□ 0.72
SMN2-216ENST00000638794 RBL2Q08999 1139 aa19.53■□□□□ 0.72
SMN2-216ENST00000638794 HSDL1Q3SXM5 330 aa19.53■□□□□ 0.72
SMN2-216ENST00000638794 CELF3Q5SZQ8 465 aaKnown RBP19.53■□□□□ 0.72
SMN2-216ENST00000638794 LRRC8DQ7L1W4 858 aa19.53■□□□□ 0.72
SMN2-216ENST00000638794 CATIPQ7Z7H3 387 aa19.53■□□□□ 0.72
SMN2-216ENST00000638794 HERC6Q8IVU3 1022 aa19.53■□□□□ 0.72
SMN2-216ENST00000638794 MB21D2Q8IYB1 491 aaPredicted RBP19.53■□□□□ 0.72
SMN2-216ENST00000638794 GPKOWQ92917 476 aaPredicted RBP eCLIP19.53■□□□□ 0.72
SMN2-216ENST00000638794 MAP4K1Q92918 833 aa19.53■□□□□ 0.72
SMN2-216ENST00000638794 SPATA33Q96N06 139 aa19.53■□□□□ 0.72
SMN2-216ENST00000638794 THEGQ9P2T0 379 aa19.53■□□□□ 0.72
SMN2-216ENST00000638794 PRRC2BQ5JSZ5 2229 aaKnown RBP19.52■□□□□ 0.72
SMN2-216ENST00000638794 DOCK5Q9H7D0 1870 aa19.52■□□□□ 0.72
SMN2-216ENST00000638794 PPFIA4O75335 1185 aa19.52■□□□□ 0.72
SMN2-216ENST00000638794 CKBP12277 381 aa19.52■□□□□ 0.72
SMN2-216ENST00000638794 IGDCC4Q8TDY8 1250 aa19.52■□□□□ 0.72
SMN2-216ENST00000638794 PIBF1Q8WXW3 757 aa19.52■□□□□ 0.72
SMN2-216ENST00000638794 CERS4Q9HA82 394 aa19.52■□□□□ 0.72
SMN2-216ENST00000638794 RBM8AQ9Y5S9 174 aaKnown RBP19.52■□□□□ 0.72
SMN2-216ENST00000638794 ARHGEF15O94989 841 aa19.51■□□□□ 0.71
SMN2-216ENST00000638794 TGFB3P10600 412 aa19.51■□□□□ 0.71
SMN2-216ENST00000638794 KCNJ6P48051 423 aa19.51■□□□□ 0.71
SMN2-216ENST00000638794 MICALL1Q8N3F8 863 aa19.51■□□□□ 0.71
SMN2-216ENST00000638794 ATXN2LQ8WWM7 1075 aaKnown RBP19.51■□□□□ 0.71
SMN2-216ENST00000638794 WNT8BQ93098 351 aa19.51■□□□□ 0.71
SMN2-216ENST00000638794 FRMPD4Q14CM0 1322 aa19.51■□□□□ 0.71
SMN2-216ENST00000638794 RBAK-RBAKDNI3L0D1 243 aa19.5■□□□□ 0.71
SMN2-216ENST00000638794 RFXAPO00287 272 aa19.5■□□□□ 0.71
SMN2-216ENST00000638794 NBNO60934 754 aa19.5■□□□□ 0.71
SMN2-216ENST00000638794 PARNO95453 639 aaKnown RBP19.5■□□□□ 0.71
SMN2-216ENST00000638794 CXCL10P02778 98 aa19.5■□□□□ 0.71
SMN2-216ENST00000638794 WDR5P61964 334 aaKnown RBP19.5■□□□□ 0.71
SMN2-216ENST00000638794 ZNF200P98182 395 aaPredicted RBP19.5■□□□□ 0.71
SMN2-216ENST00000638794 TAP1Q03518 808 aa19.5■□□□□ 0.71
SMN2-216ENST00000638794 PTK7Q13308 1070 aa19.5■□□□□ 0.71
SMN2-216ENST00000638794 HIC1Q14526 733 aa19.5■□□□□ 0.71
SMN2-216ENST00000638794 CNKSR3Q6P9H4 555 aa19.5■□□□□ 0.71
SMN2-216ENST00000638794 ZNF654Q8IZM8 581 aa19.5■□□□□ 0.71
SMN2-216ENST00000638794 C16orf70Q9BSU1 422 aa19.5■□□□□ 0.71
SMN2-216ENST00000638794 MYL10Q9BUA6 226 aa19.5■□□□□ 0.71
SMN2-216ENST00000638794 LY9Q9HBG7 655 aa19.5■□□□□ 0.71
SMN2-216ENST00000638794 EPOPA6NHQ4 379 aa19.49■□□□□ 0.71
SMN2-216ENST00000638794 KIF28PB7ZC32 967 aa19.49■□□□□ 0.71
SMN2-216ENST00000638794 MRPS9P82933 396 aaKnown RBP19.49■□□□□ 0.71
SMN2-216ENST00000638794 TCTN1Q2MV58 587 aa19.49■□□□□ 0.71
SMN2-216ENST00000638794 TRIM71Q2Q1W2 868 aaKnown RBP19.49■□□□□ 0.71
SMN2-216ENST00000638794 TRAF7Q6Q0C0 670 aa19.49■□□□□ 0.71
SMN2-216ENST00000638794 TMCO2Q7Z6W1 182 aaPredicted RBP19.49■□□□□ 0.71
SMN2-216ENST00000638794 ASB2Q96Q27 587 aa19.49■□□□□ 0.71
SMN2-216ENST00000638794 BCAS3Q9H6U6 928 aa19.49■□□□□ 0.71
SMN2-216ENST00000638794 MLXIPQ9HAP2 919 aa19.49■□□□□ 0.71
SMN2-216ENST00000638794 COL4A4P53420 1690 aaPredicted RBP19.49■□□□□ 0.71
SMN2-216ENST00000638794 TLL1O43897 1013 aa19.48■□□□□ 0.71
SMN2-216ENST00000638794 DDAH1O94760 285 aa19.48■□□□□ 0.71
SMN2-216ENST00000638794 DEFB103AP81534 67 aa19.48■□□□□ 0.71
SMN2-216ENST00000638794 MBTPS1Q14703 1052 aa19.48■□□□□ 0.71
SMN2-216ENST00000638794 GNPTABQ3T906 1256 aa19.48■□□□□ 0.71
SMN2-216ENST00000638794 ZNF618Q5T7W0 954 aa19.48■□□□□ 0.71
SMN2-216ENST00000638794 CTCFLQ8NI51 663 aaPredicted RBP19.48■□□□□ 0.71
SMN2-216ENST00000638794 ARNTL2Q8WYA1 636 aa19.48■□□□□ 0.71
SMN2-216ENST00000638794 MAP3K14Q99558 947 aa19.48■□□□□ 0.71
SMN2-216ENST00000638794 SPZ1Q9BXG8 430 aa19.48■□□□□ 0.71
SMN2-216ENST00000638794 NCOR1O75376 2440 aa19.48■□□□□ 0.71
SMN2-216ENST00000638794 PRC1O43663 620 aa19.47■□□□□ 0.71
SMN2-216ENST00000638794 POU3F3P20264 500 aaPredicted RBP19.47■□□□□ 0.71
SMN2-216ENST00000638794 MRPS5P82675 430 aaKnown RBP19.47■□□□□ 0.71
SMN2-216ENST00000638794 CASC1Q6TDU7 716 aa19.47■□□□□ 0.71
SMN2-216ENST00000638794 SPRED2Q7Z698 418 aa19.47■□□□□ 0.71
SMN2-216ENST00000638794 RRP36Q96EU6 259 aaKnown RBP19.47■□□□□ 0.71
SMN2-216ENST00000638794 INPP4AQ96PE3 977 aaPredicted RBP19.47■□□□□ 0.71
SMN2-216ENST00000638794 MTCH2Q9Y6C9 303 aa19.47■□□□□ 0.71
SMN2-216ENST00000638794 LCHNA4D1U4 455 aa19.46■□□□□ 0.71
SMN2-216ENST00000638794 H3BRB1 525 aa19.46■□□□□ 0.71
SMN2-216ENST00000638794 GTPBP6O43824 516 aaPredicted RBP19.46■□□□□ 0.71
SMN2-216ENST00000638794 STAM2O75886 525 aa19.46■□□□□ 0.71
SMN2-216ENST00000638794 LGALS2P05162 132 aa19.46■□□□□ 0.71
SMN2-216ENST00000638794 ICAM3P32942 547 aa19.46■□□□□ 0.71
SMN2-216ENST00000638794 KIF5BP33176 963 aa19.46■□□□□ 0.71
SMN2-216ENST00000638794 SEMA3FQ13275 785 aa19.46■□□□□ 0.71
SMN2-216ENST00000638794 COL9A3Q14050 684 aaPredicted RBP19.46■□□□□ 0.71
SMN2-216ENST00000638794 KRT40Q6A162 431 aa19.46■□□□□ 0.71
SMN2-216ENST00000638794 USP17L6PQ6QN14 398 aa19.46■□□□□ 0.71
SMN2-216ENST00000638794 METTL7BQ6UX53 244 aa19.46■□□□□ 0.71
SMN2-216ENST00000638794 SERINC5Q86VE9 423 aa19.46■□□□□ 0.71
SMN2-216ENST00000638794 LSG1Q9H089 658 aaKnown RBP19.46■□□□□ 0.71
SMN2-216ENST00000638794 TSPYL2Q9H2G4 693 aaPredicted RBP19.46■□□□□ 0.71
SMN2-216ENST00000638794 TUT1Q9H6E5 874 aaKnown RBP19.46■□□□□ 0.71
SMN2-216ENST00000638794 RTEL1Q9NZ71 1219 aa19.46■□□□□ 0.71
SMN2-216ENST00000638794 MICAL3Q7RTP6 2002 aa19.46■□□□□ 0.71
SMN2-216ENST00000638794 TCF20Q9UGU0 1960 aaKnown RBP19.45■□□□□ 0.7
SMN2-216ENST00000638794 ABHD14A-ACY1A0A1B0GW23 586 aa19.45■□□□□ 0.7
SMN2-216ENST00000638794 SPATA31C2B4DYI2 1134 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms