RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 MXRA8Q9BRK3 442 aa24.32■■□□□ 1.48
SCARB2-212ENST00000638663 TEX13BQ9BXU2 312 aa24.32■■□□□ 1.48
SCARB2-212ENST00000638663 NT5C3AQ9H0P0 336 aa24.32■■□□□ 1.48
SCARB2-212ENST00000638663 KIAA1024Q9UPX6 916 aa24.32■■□□□ 1.48
SCARB2-212ENST00000638663 GDAQ9Y2T3 454 aa24.32■■□□□ 1.48
SCARB2-212ENST00000638663 ARP10275 920 aa24.31■■□□□ 1.48
SCARB2-212ENST00000638663 ATP1A3P13637 1013 aa24.31■■□□□ 1.48
SCARB2-212ENST00000638663 EIF2AK2P19525 551 aaKnown RBP24.31■■□□□ 1.48
SCARB2-212ENST00000638663 CT47A1Q5JQC4 288 aaPredicted RBP24.31■■□□□ 1.48
SCARB2-212ENST00000638663 HAUS3Q68CZ6 603 aa24.31■■□□□ 1.48
SCARB2-212ENST00000638663 ERMNQ8TAM6 284 aa24.31■■□□□ 1.48
SCARB2-212ENST00000638663 CXCL11O14625 94 aa24.31■■□□□ 1.48
SCARB2-212ENST00000638663 SETQ01105 290 aaPredicted RBP24.31■■□□□ 1.48
SCARB2-212ENST00000638663 BAATQ14032 418 aaPredicted RBP24.31■■□□□ 1.48
SCARB2-212ENST00000638663 LRCH2Q5VUJ6 765 aa24.31■■□□□ 1.48
SCARB2-212ENST00000638663 DRC7Q8IY82 874 aa24.31■■□□□ 1.48
SCARB2-212ENST00000638663 PROCA1Q8NCQ7 364 aaPredicted RBP24.31■■□□□ 1.48
SCARB2-212ENST00000638663 SLC5A5Q92911 643 aa24.31■■□□□ 1.48
SCARB2-212ENST00000638663 PURBQ96QR8 312 aaKnown RBP24.31■■□□□ 1.48
SCARB2-212ENST00000638663 NFE2L3Q9Y4A8 694 aa24.31■■□□□ 1.48
SCARB2-212ENST00000638663 MYMKA6NI61 221 aa24.3■■□□□ 1.48
SCARB2-212ENST00000638663 TRAF5O00463 557 aa24.3■■□□□ 1.48
SCARB2-212ENST00000638663 SLC26A4O43511 780 aa24.3■■□□□ 1.48
SCARB2-212ENST00000638663 ITGB5P18084 799 aa24.3■■□□□ 1.48
SCARB2-212ENST00000638663 STX17P56962 302 aa24.3■■□□□ 1.48
SCARB2-212ENST00000638663 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.3■■□□□ 1.48
SCARB2-212ENST00000638663 OPTNQ96CV9 577 aa24.3■■□□□ 1.48
SCARB2-212ENST00000638663 MRFAP1L1Q96HT8 127 aa24.3■■□□□ 1.48
SCARB2-212ENST00000638663 RMDN3Q96TC7 470 aa24.3■■□□□ 1.48
SCARB2-212ENST00000638663 ZNF577Q9BSK1 485 aa24.3■■□□□ 1.48
SCARB2-212ENST00000638663 ZNF408Q9H9D4 720 aa24.3■■□□□ 1.48
SCARB2-212ENST00000638663 FRMPD4Q14CM0 1322 aa24.3■■□□□ 1.48
SCARB2-212ENST00000638663 E9PMD0 336 aa24.29■■□□□ 1.48
SCARB2-212ENST00000638663 PSMD10O75832 226 aa24.29■■□□□ 1.48
SCARB2-212ENST00000638663 RHOBTB3O94955 611 aa24.29■■□□□ 1.48
SCARB2-212ENST00000638663 PPIL2Q13356 520 aa24.29■■□□□ 1.48
SCARB2-212ENST00000638663 PCNX4Q63HM2 1172 aa24.29■■□□□ 1.48
SCARB2-212ENST00000638663 CATSPER3Q86XQ3 398 aa24.29■■□□□ 1.48
SCARB2-212ENST00000638663 KCNH4Q9UQ05 1017 aa24.29■■□□□ 1.48
SCARB2-212ENST00000638663 CTNND2Q9UQB3 1225 aa24.29■■□□□ 1.48
SCARB2-212ENST00000638663 SYNRGQ9UMZ2 1314 aa24.29■■□□□ 1.48
SCARB2-212ENST00000638663 EML1O00423 815 aa24.29■■□□□ 1.48
SCARB2-212ENST00000638663 OTOP1Q7RTM1 612 aa24.29■■□□□ 1.48
SCARB2-212ENST00000638663 EXOC1Q9NV70 894 aa24.29■■□□□ 1.48
SCARB2-212ENST00000638663 IFNKQ9P0W0 207 aa24.29■■□□□ 1.48
SCARB2-212ENST00000638663 MAPK8IP1Q9UQF2 711 aa24.29■■□□□ 1.48
SCARB2-212ENST00000638663 POTEFA5A3E0 1075 aa24.28■■□□□ 1.48
SCARB2-212ENST00000638663 CHMP2AO43633 222 aa24.28■■□□□ 1.48
SCARB2-212ENST00000638663 GAS7O60861 476 aa24.28■■□□□ 1.48
SCARB2-212ENST00000638663 HOXA7P31268 230 aaPredicted RBP24.28■■□□□ 1.48
SCARB2-212ENST00000638663 MRPS9P82933 396 aaKnown RBP24.28■■□□□ 1.48
SCARB2-212ENST00000638663 FANCCQ00597 558 aa24.28■■□□□ 1.48
SCARB2-212ENST00000638663 PGM5Q15124 567 aa24.28■■□□□ 1.48
SCARB2-212ENST00000638663 TKFCQ3LXA3 575 aa24.28■■□□□ 1.48
SCARB2-212ENST00000638663 HSP90AA4PQ58FG1 418 aa24.28■■□□□ 1.48
SCARB2-212ENST00000638663 POTEGQ6S5H5 508 aa24.28■■□□□ 1.48
SCARB2-212ENST00000638663 POTEEQ6S8J3 1075 aa24.28■■□□□ 1.48
SCARB2-212ENST00000638663 DYMQ7RTS9 669 aa24.28■■□□□ 1.48
SCARB2-212ENST00000638663 CCDC47Q96A33 483 aaKnown RBP24.28■■□□□ 1.48
SCARB2-212ENST00000638663 WDR11Q9BZH6 1224 aa24.28■■□□□ 1.48
SCARB2-212ENST00000638663 ACAD9Q9H845 621 aa24.28■■□□□ 1.48
SCARB2-212ENST00000638663 PXMP2Q9NR77 195 aa24.28■■□□□ 1.48
SCARB2-212ENST00000638663 STK24Q9Y6E0 443 aa24.28■■□□□ 1.48
SCARB2-212ENST00000638663 LOC285556D6RIA3 1793 aa24.28■■□□□ 1.48
SCARB2-212ENST00000638663 PEX10O60683 326 aa24.27■■□□□ 1.48
SCARB2-212ENST00000638663 SSBP05455 408 aaKnown RBP eCLIP24.27■■□□□ 1.48
SCARB2-212ENST00000638663 SPATA31C1P0DKV0 1188 aa24.27■■□□□ 1.48
SCARB2-212ENST00000638663 RPA1P27694 616 aa24.27■■□□□ 1.48
SCARB2-212ENST00000638663 CDC25BP30305 580 aa24.27■■□□□ 1.48
SCARB2-212ENST00000638663 PRCPP42785 496 aa24.27■■□□□ 1.48
SCARB2-212ENST00000638663 PDE4DQ08499 809 aa24.27■■□□□ 1.48
SCARB2-212ENST00000638663 LDLRAD1Q5T700 205 aa24.27■■□□□ 1.48
SCARB2-212ENST00000638663 ARHGEF16Q5VV41 709 aa24.27■■□□□ 1.48
SCARB2-212ENST00000638663 PDCD2LQ9BRP1 358 aa24.27■■□□□ 1.48
SCARB2-212ENST00000638663 UBIAD1Q9Y5Z9 338 aa24.27■■□□□ 1.48
SCARB2-212ENST00000638663 IPO5O00410 1097 aaKnown RBP24.27■■□□□ 1.48
SCARB2-212ENST00000638663 COBLO75128 1261 aa24.27■■□□□ 1.48
SCARB2-212ENST00000638663 MYCLP12524 364 aaPredicted RBP24.27■■□□□ 1.48
SCARB2-212ENST00000638663 IRX3P78415 501 aaPredicted RBP24.27■■□□□ 1.48
SCARB2-212ENST00000638663 SEMA3FQ13275 785 aa24.27■■□□□ 1.48
SCARB2-212ENST00000638663 LBX2Q6XYB7 198 aa24.27■■□□□ 1.48
SCARB2-212ENST00000638663 EIF2AK1Q9BQI3 630 aaKnown RBP24.27■■□□□ 1.48
SCARB2-212ENST00000638663 XPO4Q9C0E2 1151 aaKnown RBP24.27■■□□□ 1.48
SCARB2-212ENST00000638663 LRRC27Q9C0I9 530 aa24.27■■□□□ 1.48
SCARB2-212ENST00000638663 RRAGCQ9HB90 399 aa24.27■■□□□ 1.48
SCARB2-212ENST00000638663 KCNH7Q9NS40 1196 aa24.27■■□□□ 1.48
SCARB2-212ENST00000638663 CYP4A11Q02928 519 aa24.26■■□□□ 1.47
SCARB2-212ENST00000638663 PPP2R5CQ13362 524 aa24.26■■□□□ 1.47
SCARB2-212ENST00000638663 SPATA1Q5VX52 437 aa24.26■■□□□ 1.47
SCARB2-212ENST00000638663 GIMAP8Q8ND71 665 aaPredicted RBP24.26■■□□□ 1.47
SCARB2-212ENST00000638663 DDX12PQ92771 950 aa24.26■■□□□ 1.47
SCARB2-212ENST00000638663 SAMSN1Q9NSI8 373 aaKnown RBP24.26■■□□□ 1.47
SCARB2-212ENST00000638663 PKD2L1Q9P0L9 805 aa24.26■■□□□ 1.47
SCARB2-212ENST00000638663 GOLGA6L6A8MZA4 724 aa24.25■■□□□ 1.47
SCARB2-212ENST00000638663 PLA2G4BP0C869 781 aa24.25■■□□□ 1.47
SCARB2-212ENST00000638663 BCRP11274 1271 aa24.25■■□□□ 1.47
SCARB2-212ENST00000638663 PAK1Q13153 545 aa24.25■■□□□ 1.47
SCARB2-212ENST00000638663 NIPA1Q7RTP0 329 aa24.25■■□□□ 1.47
SCARB2-212ENST00000638663 ADSSL1Q8N142 457 aa24.25■■□□□ 1.47
SCARB2-212ENST00000638663 NELFBQ8WX92 580 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms