RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-231ENST00000637786 DDX20Q9UHI6 824 aaKnown RBP25.43■■□□□ 1.66
CHRNA7-231ENST00000637786 DDX41Q9UJV9 622 aaKnown RBP25.43■■□□□ 1.66
CHRNA7-231ENST00000637786 Q9Y3F1 56 aa25.43■■□□□ 1.66
CHRNA7-231ENST00000637786 FRMPD3Q5JV73 1810 aa25.42■■□□□ 1.66
CHRNA7-231ENST00000637786 DUSP11O75319 330 aaKnown RBP25.42■■□□□ 1.66
CHRNA7-231ENST00000637786 TXNP10599 105 aaKnown RBP25.42■■□□□ 1.66
CHRNA7-231ENST00000637786 SEMA3FQ13275 785 aa25.42■■□□□ 1.66
CHRNA7-231ENST00000637786 ORC2Q13416 577 aaPredicted RBP25.42■■□□□ 1.66
CHRNA7-231ENST00000637786 PLA2G4DQ86XP0 818 aa25.42■■□□□ 1.66
CHRNA7-231ENST00000637786 CYP2W1Q8TAV3 490 aa25.42■■□□□ 1.66
CHRNA7-231ENST00000637786 LENG9Q96B70 501 aa25.42■■□□□ 1.66
CHRNA7-231ENST00000637786 SENP7Q9BQF6 1050 aa25.42■■□□□ 1.66
CHRNA7-231ENST00000637786 RNF208Q9H0X6 261 aa25.42■■□□□ 1.66
CHRNA7-231ENST00000637786 ZSCAN16Q9H4T2 348 aaPredicted RBP25.42■■□□□ 1.66
CHRNA7-231ENST00000637786 KCNH7Q9NS40 1196 aa25.42■■□□□ 1.66
CHRNA7-231ENST00000637786 TDP2O95551 362 aa25.41■■□□□ 1.66
CHRNA7-231ENST00000637786 SMPD1P17405 629 aa25.41■■□□□ 1.66
CHRNA7-231ENST00000637786 PRR16Q569H4 304 aa25.41■■□□□ 1.66
CHRNA7-231ENST00000637786 RILPL1Q5EBL4 403 aa25.41■■□□□ 1.66
CHRNA7-231ENST00000637786 GNEQ9Y223 722 aaKnown RBP25.41■■□□□ 1.66
CHRNA7-231ENST00000637786 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.4■■□□□ 1.66
CHRNA7-231ENST00000637786 CCNT1O60563 726 aaKnown RBP25.4■■□□□ 1.66
CHRNA7-231ENST00000637786 ARIH2O95376 493 aa25.4■■□□□ 1.66
CHRNA7-231ENST00000637786 ZSCAN22P10073 491 aaPredicted RBP25.4■■□□□ 1.66
CHRNA7-231ENST00000637786 RARBP10826 455 aa25.4■■□□□ 1.66
CHRNA7-231ENST00000637786 DDIT3P35638 169 aa25.4■■□□□ 1.66
CHRNA7-231ENST00000637786 RESTQ13127 1097 aa25.4■■□□□ 1.66
CHRNA7-231ENST00000637786 FERMT3Q86UX7 667 aa25.4■■□□□ 1.66
CHRNA7-231ENST00000637786 GIMAP8Q8ND71 665 aaPredicted RBP25.4■■□□□ 1.66
CHRNA7-231ENST00000637786 DDX25Q9UHL0 483 aaKnown RBP25.4■■□□□ 1.66
CHRNA7-231ENST00000637786 ADCY6O43306 1168 aa25.39■■□□□ 1.66
CHRNA7-231ENST00000637786 GJB1P08034 283 aa25.39■■□□□ 1.66
CHRNA7-231ENST00000637786 CAPN2P17655 700 aa25.39■■□□□ 1.66
CHRNA7-231ENST00000637786 NEDD9Q14511 834 aa25.39■■□□□ 1.66
CHRNA7-231ENST00000637786 LHX8Q68G74 356 aa25.39■■□□□ 1.66
CHRNA7-231ENST00000637786 AGO4Q9HCK5 861 aaKnown RBP25.39■■□□□ 1.66
CHRNA7-231ENST00000637786 ARP10275 920 aa25.38■■□□□ 1.65
CHRNA7-231ENST00000637786 KCNA2P16389 499 aa25.38■■□□□ 1.65
CHRNA7-231ENST00000637786 UBA1P22314 1058 aaKnown RBP25.38■■□□□ 1.65
CHRNA7-231ENST00000637786 TOB1P50616 345 aaPredicted RBP25.38■■□□□ 1.65
CHRNA7-231ENST00000637786 NKX3-2P78367 333 aa25.38■■□□□ 1.65
CHRNA7-231ENST00000637786 LY6KQ17RY6 165 aa25.38■■□□□ 1.65
CHRNA7-231ENST00000637786 TTC38Q5R3I4 469 aa25.38■■□□□ 1.65
CHRNA7-231ENST00000637786 MYSM1Q5VVJ2 828 aa25.38■■□□□ 1.65
CHRNA7-231ENST00000637786 EMID1Q96A84 441 aaPredicted RBP25.38■■□□□ 1.65
CHRNA7-231ENST00000637786 KIAA0100Q14667 2235 aaKnown RBP25.38■■□□□ 1.65
CHRNA7-231ENST00000637786 TBX3O15119 743 aa25.37■■□□□ 1.65
CHRNA7-231ENST00000637786 BRD1O95696 1058 aa25.37■■□□□ 1.65
CHRNA7-231ENST00000637786 MYCP01106 439 aaPredicted RBP25.37■■□□□ 1.65
CHRNA7-231ENST00000637786 GH1P01241 217 aa25.37■■□□□ 1.65
CHRNA7-231ENST00000637786 SP2Q02086 613 aa25.37■■□□□ 1.65
CHRNA7-231ENST00000637786 PKP1Q13835 747 aa25.37■■□□□ 1.65
CHRNA7-231ENST00000637786 DEFB118Q96PH6 123 aa25.37■■□□□ 1.65
CHRNA7-231ENST00000637786 UPF3AQ9H1J1 476 aaKnown RBP25.37■■□□□ 1.65
CHRNA7-231ENST00000637786 NFASCO94856 1347 aa25.37■■□□□ 1.65
CHRNA7-231ENST00000637786 MYH15Q9Y2K3 1946 aa25.36■■□□□ 1.65
CHRNA7-231ENST00000637786 IPO5O00410 1097 aaKnown RBP25.36■■□□□ 1.65
CHRNA7-231ENST00000637786 WNT7AO00755 349 aa25.36■■□□□ 1.65
CHRNA7-231ENST00000637786 MSH4O15457 936 aa25.36■■□□□ 1.65
CHRNA7-231ENST00000637786 SLC37A4O43826 429 aa25.36■■□□□ 1.65
CHRNA7-231ENST00000637786 F13A1P00488 732 aa25.36■■□□□ 1.65
CHRNA7-231ENST00000637786 GJA9P57773 515 aa25.36■■□□□ 1.65
CHRNA7-231ENST00000637786 LAMC2Q13753 1193 aa25.36■■□□□ 1.65
CHRNA7-231ENST00000637786 CELF3Q5SZQ8 465 aaKnown RBP25.36■■□□□ 1.65
CHRNA7-231ENST00000637786 TMEM63BQ5T3F8 832 aa25.36■■□□□ 1.65
CHRNA7-231ENST00000637786 TLK2Q86UE8 772 aa25.36■■□□□ 1.65
CHRNA7-231ENST00000637786 IPO9Q96P70 1041 aaKnown RBP25.36■■□□□ 1.65
CHRNA7-231ENST00000637786 ZNF577Q9BSK1 485 aa25.36■■□□□ 1.65
CHRNA7-231ENST00000637786 TMEM106CQ9BVX2 250 aa25.36■■□□□ 1.65
CHRNA7-231ENST00000637786 SPC25Q9HBM1 224 aa25.36■■□□□ 1.65
CHRNA7-231ENST00000637786 KCNMB3Q9NPA1 279 aa25.36■■□□□ 1.65
CHRNA7-231ENST00000637786 DOCK5Q9H7D0 1870 aa25.36■■□□□ 1.65
CHRNA7-231ENST00000637786 NEMFO60524 1076 aa25.35■■□□□ 1.65
CHRNA7-231ENST00000637786 ATP9AO75110 1047 aa25.35■■□□□ 1.65
CHRNA7-231ENST00000637786 GGPS1O95749 300 aa25.35■■□□□ 1.65
CHRNA7-231ENST00000637786 ATP2B1P20020 1258 aa25.35■■□□□ 1.65
CHRNA7-231ENST00000637786 ARHGAP1Q07960 439 aa25.35■■□□□ 1.65
CHRNA7-231ENST00000637786 METTL7BQ6UX53 244 aa25.35■■□□□ 1.65
CHRNA7-231ENST00000637786 DHX37Q8IY37 1157 aaKnown RBP25.35■■□□□ 1.65
CHRNA7-231ENST00000637786 ETNPPLQ8TBG4 499 aa25.35■■□□□ 1.65
CHRNA7-231ENST00000637786 LENG1Q96BZ8 264 aaPredicted RBP25.35■■□□□ 1.65
CHRNA7-231ENST00000637786 FAM20AQ96MK3 541 aa25.35■■□□□ 1.65
CHRNA7-231ENST00000637786 CRISPLD2Q9H0B8 497 aa25.35■■□□□ 1.65
CHRNA7-231ENST00000637786 AP5M1Q9H0R1 490 aa25.35■■□□□ 1.65
CHRNA7-231ENST00000637786 XPNPEP3Q9NQH7 507 aa25.35■■□□□ 1.65
CHRNA7-231ENST00000637786 TBC1D22BQ9NU19 505 aa25.35■■□□□ 1.65
CHRNA7-231ENST00000637786 OGDHLQ9ULD0 1010 aa25.35■■□□□ 1.65
CHRNA7-231ENST00000637786 SYNRGQ9UMZ2 1314 aa25.35■■□□□ 1.65
CHRNA7-231ENST00000637786 SGPL1O95470 568 aa25.34■■□□□ 1.65
CHRNA7-231ENST00000637786 GJA8P48165 433 aa25.34■■□□□ 1.65
CHRNA7-231ENST00000637786 NUCB2P80303 420 aa25.34■■□□□ 1.65
CHRNA7-231ENST00000637786 GJC2Q5T442 439 aaPredicted RBP25.34■■□□□ 1.65
CHRNA7-231ENST00000637786 ANO1Q5XXA6 986 aa25.34■■□□□ 1.65
CHRNA7-231ENST00000637786 OR6J1Q8NGC5 347 aa25.34■■□□□ 1.65
CHRNA7-231ENST00000637786 COPS5Q92905 334 aa25.34■■□□□ 1.65
CHRNA7-231ENST00000637786 SLC5A5Q92911 643 aa25.34■■□□□ 1.65
CHRNA7-231ENST00000637786 ABHD8Q96I13 439 aa25.34■■□□□ 1.65
CHRNA7-231ENST00000637786 RIT2Q99578 217 aa25.34■■□□□ 1.65
CHRNA7-231ENST00000637786 SDF4Q9BRK5 362 aa25.34■■□□□ 1.65
CHRNA7-231ENST00000637786 CIZ1Q9ULV3 898 aaPredicted RBP25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms