RNA–Protein interactions for RNA: ENST00000637721.1

SYNGAP1-224, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 190 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-224ENST00000637721 TAF6LQ9Y6J9 622 aa15.19■□□□□ 0.02
SYNGAP1-224ENST00000637721 SCN5AQ14524 2016 aa15.19■□□□□ 0.02
SYNGAP1-224ENST00000637721 CCDC69A6NI79 296 aa15.18■□□□□ 0.02
SYNGAP1-224ENST00000637721 PIK3CDO00329 1044 aa15.18■□□□□ 0.02
SYNGAP1-224ENST00000637721 PRC1O43663 620 aa15.18■□□□□ 0.02
SYNGAP1-224ENST00000637721 RGS20O76081 388 aa15.18■□□□□ 0.02
SYNGAP1-224ENST00000637721 ATP2A2P16615 1042 aaKnown RBP15.18■□□□□ 0.02
SYNGAP1-224ENST00000637721 PSEN2P49810 448 aa15.18■□□□□ 0.02
SYNGAP1-224ENST00000637721 BMP2KLQ5H9B9 411 aa15.18■□□□□ 0.02
SYNGAP1-224ENST00000637721 CELF3Q5SZQ8 465 aaKnown RBP15.18■□□□□ 0.02
SYNGAP1-224ENST00000637721 RNF20Q5VTR2 975 aa15.18■□□□□ 0.02
SYNGAP1-224ENST00000637721 XRRA1Q6P2D8 792 aa15.18■□□□□ 0.02
SYNGAP1-224ENST00000637721 CUL5Q93034 780 aa15.18■□□□□ 0.02
SYNGAP1-224ENST00000637721 VWCEQ96DN2 955 aa15.18■□□□□ 0.02
SYNGAP1-224ENST00000637721 HAS3O00219 553 aa15.17■□□□□ 0.02
SYNGAP1-224ENST00000637721 SH2B2O14492 632 aaPredicted RBP15.17■□□□□ 0.02
SYNGAP1-224ENST00000637721 GGPS1O95749 300 aa15.17■□□□□ 0.02
SYNGAP1-224ENST00000637721 SELPP16109 830 aa15.17■□□□□ 0.02
SYNGAP1-224ENST00000637721 UBA1P22314 1058 aaKnown RBP15.17■□□□□ 0.02
SYNGAP1-224ENST00000637721 ICAM3P32942 547 aa15.17■□□□□ 0.02
SYNGAP1-224ENST00000637721 NEDD9Q14511 834 aa15.17■□□□□ 0.02
SYNGAP1-224ENST00000637721 MFSD10Q14728 455 aa15.17■□□□□ 0.02
SYNGAP1-224ENST00000637721 NECTIN1Q15223 517 aa15.17■□□□□ 0.02
SYNGAP1-224ENST00000637721 KIAA0753Q2KHM9 967 aa15.17■□□□□ 0.02
SYNGAP1-224ENST00000637721 GDF6Q6KF10 455 aaPredicted RBP15.17■□□□□ 0.02
SYNGAP1-224ENST00000637721 NFXL1Q6ZNB6 911 aa15.17■□□□□ 0.02
SYNGAP1-224ENST00000637721 DEFB128Q7Z7B8 93 aa15.17■□□□□ 0.02
SYNGAP1-224ENST00000637721 FCHSD1Q86WN1 690 aa15.17■□□□□ 0.02
SYNGAP1-224ENST00000637721 SPATA33Q96N06 139 aa15.17■□□□□ 0.02
SYNGAP1-224ENST00000637721 MLXIPQ9HAP2 919 aa15.17■□□□□ 0.02
SYNGAP1-224ENST00000637721 TTC28Q96AY4 2481 aa15.17■□□□□ 0.02
SYNGAP1-224ENST00000637721 MUC3AQ02505 3323 aa15.17■□□□□ 0.02
SYNGAP1-224ENST00000637721 SLC27A2O14975 620 aa15.16■□□□□ 0.02
SYNGAP1-224ENST00000637721 CHMP4BP1P59074 171 aa15.16■□□□□ 0.02
SYNGAP1-224ENST00000637721 PTK7Q13308 1070 aa15.16■□□□□ 0.02
SYNGAP1-224ENST00000637721 CREB3L3Q68CJ9 461 aa15.16■□□□□ 0.02
SYNGAP1-224ENST00000637721 TEX2Q8IWB9 1127 aa15.16■□□□□ 0.02
SYNGAP1-224ENST00000637721 SMARCC2Q8TAQ2 1214 aa15.16■□□□□ 0.02
SYNGAP1-224ENST00000637721 FTOQ9C0B1 505 aaKnown RBP eCLIP15.16■□□□□ 0.02
SYNGAP1-224ENST00000637721 NKX2-4Q9H2Z4 354 aa15.16■□□□□ 0.02
SYNGAP1-224ENST00000637721 ANO2Q9NQ90 1003 aa15.16■□□□□ 0.02
SYNGAP1-224ENST00000637721 HDAC6Q9UBN7 1215 aa15.16■□□□□ 0.02
SYNGAP1-224ENST00000637721 TET1Q8NFU7 2136 aa15.16■□□□□ 0.02
SYNGAP1-224ENST00000637721 KIF28PB7ZC32 967 aa15.15■□□□□ 0.02
SYNGAP1-224ENST00000637721 FIBPO43427 364 aa15.15■□□□□ 0.02
SYNGAP1-224ENST00000637721 EFCAB14O75071 495 aa15.15■□□□□ 0.02
SYNGAP1-224ENST00000637721 HSDL1Q3SXM5 330 aa15.15■□□□□ 0.02
SYNGAP1-224ENST00000637721 PPP2R2DQ66LE6 453 aa15.15■□□□□ 0.02
SYNGAP1-224ENST00000637721 LRRC8DQ7L1W4 858 aa15.15■□□□□ 0.02
SYNGAP1-224ENST00000637721 SGMS1Q86VZ5 419 aa15.15■□□□□ 0.02
SYNGAP1-224ENST00000637721 GIMAP8Q8ND71 665 aaPredicted RBP15.15■□□□□ 0.02
SYNGAP1-224ENST00000637721 IL31RAQ8NI17 732 aa15.15■□□□□ 0.02
SYNGAP1-224ENST00000637721 SYMPKQ92797 1274 aaKnown RBP15.15■□□□□ 0.02
SYNGAP1-224ENST00000637721 INPP4AQ96PE3 977 aaPredicted RBP15.15■□□□□ 0.02
SYNGAP1-224ENST00000637721 CTAGE1Q96RT6 745 aa15.15■□□□□ 0.02
SYNGAP1-224ENST00000637721 SENP7Q9BQF6 1050 aa15.15■□□□□ 0.02
SYNGAP1-224ENST00000637721 ALG1Q9BT22 464 aa15.15■□□□□ 0.02
SYNGAP1-224ENST00000637721 USP26Q9BXU7 913 aa15.15■□□□□ 0.02
SYNGAP1-224ENST00000637721 YBX2Q9Y2T7 364 aaKnown RBP15.15■□□□□ 0.02
SYNGAP1-224ENST00000637721 SLC12A7Q9Y666 1083 aa15.15■□□□□ 0.02
SYNGAP1-224ENST00000637721 NOP56O00567 594 aaKnown RBP15.14■□□□□ 0.01
SYNGAP1-224ENST00000637721 CXCL10P02778 98 aa15.14■□□□□ 0.01
SYNGAP1-224ENST00000637721 ZNF286BP0CG31 522 aa15.14■□□□□ 0.01
SYNGAP1-224ENST00000637721 KCNJ6P48051 423 aa15.14■□□□□ 0.01
SYNGAP1-224ENST00000637721 MRPS9P82933 396 aaKnown RBP15.14■□□□□ 0.01
SYNGAP1-224ENST00000637721 SP2Q02086 613 aa15.14■□□□□ 0.01
SYNGAP1-224ENST00000637721 PCNX4Q63HM2 1172 aa15.14■□□□□ 0.01
SYNGAP1-224ENST00000637721 METTL7BQ6UX53 244 aa15.14■□□□□ 0.01
SYNGAP1-224ENST00000637721 SYNE3Q6ZMZ3 975 aa15.14■□□□□ 0.01
SYNGAP1-224ENST00000637721 NLRX1Q86UT6 975 aa15.14■□□□□ 0.01
SYNGAP1-224ENST00000637721 CDHR1Q96JP9 859 aa15.14■□□□□ 0.01
SYNGAP1-224ENST00000637721 COL25A1Q9BXS0 654 aaPredicted RBP15.14■□□□□ 0.01
SYNGAP1-224ENST00000637721 PRDM12Q9H4Q4 367 aa15.14■□□□□ 0.01
SYNGAP1-224ENST00000637721 XIRP2A4UGR9 3374 aa15.13■□□□□ 0.01
SYNGAP1-224ENST00000637721 SPATA31C2B4DYI2 1134 aa15.13■□□□□ 0.01
SYNGAP1-224ENST00000637721 MEIS2O14770 477 aa15.13■□□□□ 0.01
SYNGAP1-224ENST00000637721 CKBP12277 381 aa15.13■□□□□ 0.01
SYNGAP1-224ENST00000637721 CNKSR3Q6P9H4 555 aa15.13■□□□□ 0.01
SYNGAP1-224ENST00000637721 SRBD1Q8N5C6 995 aaKnown RBP15.13■□□□□ 0.01
SYNGAP1-224ENST00000637721 PPP1R13LQ8WUF5 828 aa15.13■□□□□ 0.01
SYNGAP1-224ENST00000637721 C16orf70Q9BSU1 422 aa15.13■□□□□ 0.01
SYNGAP1-224ENST00000637721 MYL10Q9BUA6 226 aa15.13■□□□□ 0.01
SYNGAP1-224ENST00000637721 RBM28Q9NW13 759 aaKnown RBP15.13■□□□□ 0.01
SYNGAP1-224ENST00000637721 EMSYQ7Z589 1322 aa15.13■□□□□ 0.01
SYNGAP1-224ENST00000637721 C17orf102A2RUQ5 167 aa15.12■□□□□ 0.01
SYNGAP1-224ENST00000637721 H3BRB1 525 aa15.12■□□□□ 0.01
SYNGAP1-224ENST00000637721 CAND2O75155 1236 aa15.12■□□□□ 0.01
SYNGAP1-224ENST00000637721 PLEKHA8P1O95397 391 aa15.12■□□□□ 0.01
SYNGAP1-224ENST00000637721 GNAT1P11488 350 aa15.12■□□□□ 0.01
SYNGAP1-224ENST00000637721 RABGGTBP53611 331 aa15.12■□□□□ 0.01
SYNGAP1-224ENST00000637721 KRT32Q14532 448 aa15.12■□□□□ 0.01
SYNGAP1-224ENST00000637721 TSGA10IPQ3SY00 556 aa15.12■□□□□ 0.01
SYNGAP1-224ENST00000637721 HERC6Q8IVU3 1022 aa15.12■□□□□ 0.01
SYNGAP1-224ENST00000637721 FANCBQ8NB91 859 aa15.12■□□□□ 0.01
SYNGAP1-224ENST00000637721 PIBF1Q8WXW3 757 aa15.12■□□□□ 0.01
SYNGAP1-224ENST00000637721 DHX38Q92620 1227 aaKnown RBP15.12■□□□□ 0.01
SYNGAP1-224ENST00000637721 TUT1Q9H6E5 874 aaKnown RBP15.12■□□□□ 0.01
SYNGAP1-224ENST00000637721 PSTPIP2Q9H939 334 aa15.12■□□□□ 0.01
SYNGAP1-224ENST00000637721 ZNF215Q9UL58 517 aaPredicted RBP15.12■□□□□ 0.01
SYNGAP1-224ENST00000637721 NCOR1O75376 2440 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms