RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 HSDL1Q3SXM5 330 aa21.38■■□□□ 1.01
CLN6-220ENST00000637450 LRRC8DQ7L1W4 858 aa21.38■■□□□ 1.01
CLN6-220ENST00000637450 HERC6Q8IVU3 1022 aa21.38■■□□□ 1.01
CLN6-220ENST00000637450 ATXN2LQ8WWM7 1075 aaKnown RBP21.38■■□□□ 1.01
CLN6-220ENST00000637450 SPATA33Q96N06 139 aa21.38■■□□□ 1.01
CLN6-220ENST00000637450 SCN5AQ14524 2016 aa21.38■■□□□ 1.01
CLN6-220ENST00000637450 MUC3AQ02505 3323 aa21.37■■□□□ 1.01
CLN6-220ENST00000637450 KIF28PB7ZC32 967 aa21.37■■□□□ 1.01
CLN6-220ENST00000637450 CXCL10P02778 98 aa21.37■■□□□ 1.01
CLN6-220ENST00000637450 CKBP12277 381 aa21.37■■□□□ 1.01
CLN6-220ENST00000637450 UBA1P22314 1058 aaKnown RBP21.37■■□□□ 1.01
CLN6-220ENST00000637450 PTK7Q13308 1070 aa21.37■■□□□ 1.01
CLN6-220ENST00000637450 GPKOWQ92917 476 aaPredicted RBP eCLIP21.37■■□□□ 1.01
CLN6-220ENST00000637450 ZFP91Q96JP5 570 aaPredicted RBP21.37■■□□□ 1.01
CLN6-220ENST00000637450 MAP3K14Q99558 947 aa21.37■■□□□ 1.01
CLN6-220ENST00000637450 RBM8AQ9Y5S9 174 aaKnown RBP21.37■■□□□ 1.01
CLN6-220ENST00000637450 KIAA1217Q5T5P2 1943 aa21.37■■□□□ 1.01
CLN6-220ENST00000637450 MYH6P13533 1939 aa21.36■■□□□ 1.01
CLN6-220ENST00000637450 SORBS3O60504 671 aa21.36■■□□□ 1.01
CLN6-220ENST00000637450 TRIM71Q2Q1W2 868 aaKnown RBP21.36■■□□□ 1.01
CLN6-220ENST00000637450 C16orf70Q9BSU1 422 aa21.36■■□□□ 1.01
CLN6-220ENST00000637450 MLXIPQ9HAP2 919 aa21.36■■□□□ 1.01
CLN6-220ENST00000637450 LY9Q9HBG7 655 aa21.36■■□□□ 1.01
CLN6-220ENST00000637450 THEGQ9P2T0 379 aa21.36■■□□□ 1.01
CLN6-220ENST00000637450 NBNO60934 754 aa21.35■■□□□ 1.01
CLN6-220ENST00000637450 SMARCA1P28370 1054 aa21.35■■□□□ 1.01
CLN6-220ENST00000637450 KCNJ6P48051 423 aa21.35■■□□□ 1.01
CLN6-220ENST00000637450 MRPS9P82933 396 aaKnown RBP21.35■■□□□ 1.01
CLN6-220ENST00000637450 ZNF200P98182 395 aaPredicted RBP21.35■■□□□ 1.01
CLN6-220ENST00000637450 TRAF7Q6Q0C0 670 aa21.35■■□□□ 1.01
CLN6-220ENST00000637450 PIBF1Q8WXW3 757 aa21.35■■□□□ 1.01
CLN6-220ENST00000637450 ASB2Q96Q27 587 aa21.35■■□□□ 1.01
CLN6-220ENST00000637450 MTA3Q9BTC8 594 aa21.35■■□□□ 1.01
CLN6-220ENST00000637450 SPZ1Q9BXG8 430 aa21.35■■□□□ 1.01
CLN6-220ENST00000637450 BAZ2BQ9UIF8 2168 aaKnown RBP21.35■■□□□ 1.01
CLN6-220ENST00000637450 TET1Q8NFU7 2136 aa21.35■■□□□ 1.01
CLN6-220ENST00000637450 GBF1Q92538 1859 aa21.35■■□□□ 1.01
CLN6-220ENST00000637450 FRMPD4Q14CM0 1322 aa21.34■■□□□ 1.01
CLN6-220ENST00000637450 RFXAPO00287 272 aa21.34■■□□□ 1.01
CLN6-220ENST00000637450 STAM2O75886 525 aa21.34■■□□□ 1.01
CLN6-220ENST00000637450 DDAH1O94760 285 aa21.34■■□□□ 1.01
CLN6-220ENST00000637450 ARHGEF15O94989 841 aa21.34■■□□□ 1.01
CLN6-220ENST00000637450 POU3F3P20264 500 aaPredicted RBP21.34■■□□□ 1.01
CLN6-220ENST00000637450 ICAM3P32942 547 aa21.34■■□□□ 1.01
CLN6-220ENST00000637450 WDR5P61964 334 aaKnown RBP21.34■■□□□ 1.01
CLN6-220ENST00000637450 TAP1Q03518 808 aa21.34■■□□□ 1.01
CLN6-220ENST00000637450 HIC1Q14526 733 aa21.34■■□□□ 1.01
CLN6-220ENST00000637450 CNKSR3Q6P9H4 555 aa21.34■■□□□ 1.01
CLN6-220ENST00000637450 ZNF654Q8IZM8 581 aa21.34■■□□□ 1.01
CLN6-220ENST00000637450 WNT8BQ93098 351 aa21.34■■□□□ 1.01
CLN6-220ENST00000637450 INPP4AQ96PE3 977 aaPredicted RBP21.34■■□□□ 1.01
CLN6-220ENST00000637450 BCAS3Q9H6U6 928 aa21.34■■□□□ 1.01
CLN6-220ENST00000637450 CERS4Q9HA82 394 aa21.34■■□□□ 1.01
CLN6-220ENST00000637450 TRANK1O15050 2925 aa21.34■■□□□ 1.01
CLN6-220ENST00000637450 KIF5BP33176 963 aa21.33■■□□□ 1.01
CLN6-220ENST00000637450 MRPS5P82675 430 aaKnown RBP21.33■■□□□ 1.01
CLN6-220ENST00000637450 GNPTABQ3T906 1256 aa21.33■■□□□ 1.01
CLN6-220ENST00000637450 ZNF618Q5T7W0 954 aa21.33■■□□□ 1.01
CLN6-220ENST00000637450 CASC1Q6TDU7 716 aa21.33■■□□□ 1.01
CLN6-220ENST00000637450 CTCFLQ8NI51 663 aaPredicted RBP21.33■■□□□ 1.01
CLN6-220ENST00000637450 RRP36Q96EU6 259 aaKnown RBP21.33■■□□□ 1.01
CLN6-220ENST00000637450 MYL10Q9BUA6 226 aa21.33■■□□□ 1.01
CLN6-220ENST00000637450 LSG1Q9H089 658 aaKnown RBP21.33■■□□□ 1.01
CLN6-220ENST00000637450 EPOPA6NHQ4 379 aa21.32■■□□□ 1
CLN6-220ENST00000637450 SPATA31C2B4DYI2 1134 aa21.32■■□□□ 1
CLN6-220ENST00000637450 PRC1O43663 620 aa21.32■■□□□ 1
CLN6-220ENST00000637450 TLL1O43897 1013 aa21.32■■□□□ 1
CLN6-220ENST00000637450 TCTN1Q2MV58 587 aa21.32■■□□□ 1
CLN6-220ENST00000637450 TMTC2Q8N394 836 aa21.32■■□□□ 1
CLN6-220ENST00000637450 LZTS2Q9BRK4 669 aa21.32■■□□□ 1
CLN6-220ENST00000637450 RTEL1Q9NZ71 1219 aa21.32■■□□□ 1
CLN6-220ENST00000637450 MTCH2Q9Y6C9 303 aa21.32■■□□□ 1
CLN6-220ENST00000637450 XIRP2A4UGR9 3374 aa21.32■■□□□ 1
CLN6-220ENST00000637450 TRIP12Q14669 1992 aaPredicted RBP21.32■■□□□ 1
CLN6-220ENST00000637450 TANC1Q9C0D5 1861 aa21.31■■□□□ 1
CLN6-220ENST00000637450 ABHD14A-ACY1A0A1B0GW23 586 aa21.31■■□□□ 1
CLN6-220ENST00000637450 H3BRB1 525 aa21.31■■□□□ 1
CLN6-220ENST00000637450 LGALS2P05162 132 aa21.31■■□□□ 1
CLN6-220ENST00000637450 MCM5P33992 734 aa21.31■■□□□ 1
CLN6-220ENST00000637450 SEMA3FQ13275 785 aa21.31■■□□□ 1
CLN6-220ENST00000637450 NEDD9Q14511 834 aa21.31■■□□□ 1
CLN6-220ENST00000637450 MBTPS1Q14703 1052 aa21.31■■□□□ 1
CLN6-220ENST00000637450 USP17L6PQ6QN14 398 aa21.31■■□□□ 1
CLN6-220ENST00000637450 SERINC5Q86VE9 423 aa21.31■■□□□ 1
CLN6-220ENST00000637450 MICALL1Q8N3F8 863 aa21.31■■□□□ 1
CLN6-220ENST00000637450 ARNTL2Q8WYA1 636 aa21.31■■□□□ 1
CLN6-220ENST00000637450 TSPYL2Q9H2G4 693 aaPredicted RBP21.31■■□□□ 1
CLN6-220ENST00000637450 TUT1Q9H6E5 874 aaKnown RBP21.31■■□□□ 1
CLN6-220ENST00000637450 REV3LO60673 3130 aa21.3■■□□□ 1
CLN6-220ENST00000637450 PIK3CDO00329 1044 aa21.3■■□□□ 1
CLN6-220ENST00000637450 SH2B2O14492 632 aaPredicted RBP21.3■■□□□ 1
CLN6-220ENST00000637450 MEIS2O14770 477 aa21.3■■□□□ 1
CLN6-220ENST00000637450 GTPBP6O43824 516 aaPredicted RBP21.3■■□□□ 1
CLN6-220ENST00000637450 HOXC8P31273 242 aa21.3■■□□□ 1
CLN6-220ENST00000637450 GNAQP50148 359 aa21.3■■□□□ 1
CLN6-220ENST00000637450 DEFB103AP81534 67 aa21.3■■□□□ 1
CLN6-220ENST00000637450 IKBKEQ14164 716 aa21.3■■□□□ 1
CLN6-220ENST00000637450 XRRA1Q6P2D8 792 aa21.3■■□□□ 1
CLN6-220ENST00000637450 METTL7BQ6UX53 244 aa21.3■■□□□ 1
CLN6-220ENST00000637450 CYFIP1Q7L576 1253 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms