RNA–Protein interactions for RNA: ENST00000637439.1

CIITA-215, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-215ENST00000637439 IGHDP01880 384 aa20.76■□□□□ 0.91
CIITA-215ENST00000637439 TGFB3P10600 412 aa20.76■□□□□ 0.91
CIITA-215ENST00000637439 MYCLP12524 364 aaPredicted RBP20.76■□□□□ 0.91
CIITA-215ENST00000637439 HOXD8P13378 290 aaPredicted RBP20.76■□□□□ 0.91
CIITA-215ENST00000637439 KCNQ1P51787 676 aa20.76■□□□□ 0.91
CIITA-215ENST00000637439 MYSM1Q5VVJ2 828 aa20.76■□□□□ 0.91
CIITA-215ENST00000637439 HLA-CQ95604 372 aa20.76■□□□□ 0.91
CIITA-215ENST00000637439 GJB5O95377 273 aa20.75■□□□□ 0.91
CIITA-215ENST00000637439 ZNF286BP0CG31 522 aa20.75■□□□□ 0.91
CIITA-215ENST00000637439 DEFB103AP81534 67 aa20.75■□□□□ 0.91
CIITA-215ENST00000637439 TRDNQ13061 729 aa20.75■□□□□ 0.91
CIITA-215ENST00000637439 SEC23AQ15436 765 aa20.75■□□□□ 0.91
CIITA-215ENST00000637439 CELF3Q5SZQ8 465 aaKnown RBP20.75■□□□□ 0.91
CIITA-215ENST00000637439 KRT40Q6A162 431 aa20.75■□□□□ 0.91
CIITA-215ENST00000637439 VSIG10LQ86VR7 867 aa20.75■□□□□ 0.91
CIITA-215ENST00000637439 SPATA33Q96N06 139 aa20.75■□□□□ 0.91
CIITA-215ENST00000637439 C1QTNF1Q9BXJ1 281 aa20.75■□□□□ 0.91
CIITA-215ENST00000637439 MAD2L2Q9UI95 211 aa20.75■□□□□ 0.91
CIITA-215ENST00000637439 EMSYQ7Z589 1322 aa20.75■□□□□ 0.91
CIITA-215ENST00000637439 PALM3A6NDB9 673 aaPredicted RBP20.74■□□□□ 0.91
CIITA-215ENST00000637439 RGS20O76081 388 aa20.74■□□□□ 0.91
CIITA-215ENST00000637439 CCND2P30279 289 aa20.74■□□□□ 0.91
CIITA-215ENST00000637439 PGM5Q15124 567 aa20.74■□□□□ 0.91
CIITA-215ENST00000637439 TRIM71Q2Q1W2 868 aaKnown RBP20.74■□□□□ 0.91
CIITA-215ENST00000637439 NECAB3Q96P71 396 aaPredicted RBP20.74■□□□□ 0.91
CIITA-215ENST00000637439 LCHNA4D1U4 455 aa20.73■□□□□ 0.91
CIITA-215ENST00000637439 LPXNO60711 386 aa20.73■□□□□ 0.91
CIITA-215ENST00000637439 PPP1R11O60927 126 aaPredicted RBP20.73■□□□□ 0.91
CIITA-215ENST00000637439 GGPS1O95749 300 aa20.73■□□□□ 0.91
CIITA-215ENST00000637439 HSDL1Q3SXM5 330 aa20.73■□□□□ 0.91
CIITA-215ENST00000637439 ZNF618Q5T7W0 954 aa20.73■□□□□ 0.91
CIITA-215ENST00000637439 TGS1Q96RS0 853 aaKnown RBP20.73■□□□□ 0.91
CIITA-215ENST00000637439 COL4A4P53420 1690 aaPredicted RBP20.73■□□□□ 0.91
CIITA-215ENST00000637439 GCOM1H8Y6P7 765 aaPredicted RBP20.72■□□□□ 0.91
CIITA-215ENST00000637439 LGR5O75473 907 aa20.72■□□□□ 0.91
CIITA-215ENST00000637439 POLR2MP0CAP2 368 aa20.72■□□□□ 0.91
CIITA-215ENST00000637439 HOXA13P31271 388 aaPredicted RBP20.72■□□□□ 0.91
CIITA-215ENST00000637439 ERVK-21P61565 698 aa20.72■□□□□ 0.91
CIITA-215ENST00000637439 TRAF7Q6Q0C0 670 aa20.72■□□□□ 0.91
CIITA-215ENST00000637439 CYB5R4Q7L1T6 521 aa20.72■□□□□ 0.91
CIITA-215ENST00000637439 TMCO2Q7Z6W1 182 aaPredicted RBP20.72■□□□□ 0.91
CIITA-215ENST00000637439 RIOX1Q9H6W3 641 aa20.72■□□□□ 0.91
CIITA-215ENST00000637439 MLXIPQ9HAP2 919 aa20.72■□□□□ 0.91
CIITA-215ENST00000637439 ERICH2A1L162 156 aa20.71■□□□□ 0.91
CIITA-215ENST00000637439 GRM4Q14833 912 aa20.71■□□□□ 0.91
CIITA-215ENST00000637439 SPRED2Q7Z698 418 aa20.71■□□□□ 0.91
CIITA-215ENST00000637439 SERINC5Q86VE9 423 aa20.71■□□□□ 0.91
CIITA-215ENST00000637439 HOMER1Q86YM7 354 aa20.71■□□□□ 0.91
CIITA-215ENST00000637439 INSL6Q9Y581 213 aa20.71■□□□□ 0.91
CIITA-215ENST00000637439 U3KPZ7 1027 aaPredicted RBP20.71■□□□□ 0.91
CIITA-215ENST00000637439 RSPH10B2B2RC85 870 aa20.7■□□□□ 0.9
CIITA-215ENST00000637439 STAM2O75886 525 aa20.7■□□□□ 0.9
CIITA-215ENST00000637439 RSPH10BP0C881 870 aa20.7■□□□□ 0.9
CIITA-215ENST00000637439 UBA1P22314 1058 aaKnown RBP20.7■□□□□ 0.9
CIITA-215ENST00000637439 ZNF200P98182 395 aaPredicted RBP20.7■□□□□ 0.9
CIITA-215ENST00000637439 SART3Q15020 963 aaKnown RBP20.7■□□□□ 0.9
CIITA-215ENST00000637439 TCTN1Q2MV58 587 aa20.7■□□□□ 0.9
CIITA-215ENST00000637439 GNPTABQ3T906 1256 aa20.7■□□□□ 0.9
CIITA-215ENST00000637439 GDPD5Q8WTR4 605 aa20.7■□□□□ 0.9
CIITA-215ENST00000637439 RUFY2Q8WXA3 655 aa20.7■□□□□ 0.9
CIITA-215ENST00000637439 WNT8BQ93098 351 aa20.7■□□□□ 0.9
CIITA-215ENST00000637439 PIGSQ96S52 555 aa20.7■□□□□ 0.9
CIITA-215ENST00000637439 C16orf70Q9BSU1 422 aa20.7■□□□□ 0.9
CIITA-215ENST00000637439 PNMA6FA0A0J9YX94 578 aa20.69■□□□□ 0.9
CIITA-215ENST00000637439 C17orf102A2RUQ5 167 aa20.69■□□□□ 0.9
CIITA-215ENST00000637439 LINC01553A4QN01 128 aa20.69■□□□□ 0.9
CIITA-215ENST00000637439 H3BRB1 525 aa20.69■□□□□ 0.9
CIITA-215ENST00000637439 IFIT3O14879 490 aaKnown RBP20.69■□□□□ 0.9
CIITA-215ENST00000637439 AMHP03971 560 aa20.69■□□□□ 0.9
CIITA-215ENST00000637439 THPOP40225 353 aa20.69■□□□□ 0.9
CIITA-215ENST00000637439 SP2Q02086 613 aa20.69■□□□□ 0.9
CIITA-215ENST00000637439 MBTPS1Q14703 1052 aa20.69■□□□□ 0.9
CIITA-215ENST00000637439 FCHSD1Q86WN1 690 aa20.69■□□□□ 0.9
CIITA-215ENST00000637439 IL31RAQ8NI17 732 aa20.69■□□□□ 0.9
CIITA-215ENST00000637439 TUT1Q9H6E5 874 aaKnown RBP20.69■□□□□ 0.9
CIITA-215ENST00000637439 SUGCTQ9HAC7 445 aa20.69■□□□□ 0.9
CIITA-215ENST00000637439 NOP56O00567 594 aaKnown RBP20.68■□□□□ 0.9
CIITA-215ENST00000637439 SORBS3O60504 671 aa20.68■□□□□ 0.9
CIITA-215ENST00000637439 CAND2O75155 1236 aa20.68■□□□□ 0.9
CIITA-215ENST00000637439 RALYLQ86SE5 291 aaKnown RBP20.68■□□□□ 0.9
CIITA-215ENST00000637439 EXOC6Q8TAG9 804 aa20.68■□□□□ 0.9
CIITA-215ENST00000637439 ATP6V0A1Q93050 837 aa20.68■□□□□ 0.9
CIITA-215ENST00000637439 USP26Q9BXU7 913 aa20.68■□□□□ 0.9
CIITA-215ENST00000637439 IL25Q9H293 177 aa20.68■□□□□ 0.9
CIITA-215ENST00000637439 MTUS1Q9ULD2 1270 aa20.68■□□□□ 0.9
CIITA-215ENST00000637439 SIP14410 1827 aa20.68■□□□□ 0.9
CIITA-215ENST00000637439 LGALS2P05162 132 aa20.67■□□□□ 0.9
CIITA-215ENST00000637439 GNAT1P11488 350 aa20.67■□□□□ 0.9
CIITA-215ENST00000637439 HOXC8P31273 242 aa20.67■□□□□ 0.9
CIITA-215ENST00000637439 NEDD9Q14511 834 aa20.67■□□□□ 0.9
CIITA-215ENST00000637439 HIC1Q14526 733 aa20.67■□□□□ 0.9
CIITA-215ENST00000637439 WTAPQ15007 396 aa20.67■□□□□ 0.9
CIITA-215ENST00000637439 FAM117BQ6P1L5 589 aa20.67■□□□□ 0.9
CIITA-215ENST00000637439 DBF4BQ8NFT6 615 aa20.67■□□□□ 0.9
CIITA-215ENST00000637439 CYP21A2P08686 494 aa20.66■□□□□ 0.9
CIITA-215ENST00000637439 SMIM10L2AP0DMW4 78 aa20.66■□□□□ 0.9
CIITA-215ENST00000637439 SMIM10L2BP0DMW5 78 aa20.66■□□□□ 0.9
CIITA-215ENST00000637439 ICAM3P32942 547 aa20.66■□□□□ 0.9
CIITA-215ENST00000637439 TROAPQ12815 778 aa20.66■□□□□ 0.9
CIITA-215ENST00000637439 SLC35G1Q2M3R5 365 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms