RNA–Protein interactions for RNA: ENST00000637340.1

EFHC1-232, Transcript of EF-hand domain containing 1, humanhuman

TSL 1 (best)

Gene EFHC1, Length 4,004 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-232ENST00000637340 RBBP5Q15291 538 aaKnown RBP12.12□□□□□ -0.47
EFHC1-232ENST00000637340 IFI16Q16666 785 aaKnown RBP12.12□□□□□ -0.47
EFHC1-232ENST00000637340 NT5DC1Q5TFE4 455 aa12.12□□□□□ -0.47
EFHC1-232ENST00000637340 RDH13Q8NBN7 331 aa12.12□□□□□ -0.47
EFHC1-232ENST00000637340 SLC17A8Q8NDX2 589 aa12.12□□□□□ -0.47
EFHC1-232ENST00000637340 STAG1Q8WVM7 1258 aa12.12□□□□□ -0.47
EFHC1-232ENST00000637340 PSMD1Q99460 953 aa12.12□□□□□ -0.47
EFHC1-232ENST00000637340 DNAJC7Q99615 494 aa12.12□□□□□ -0.47
EFHC1-232ENST00000637340 MYO5BQ9ULV0 1848 aa12.12□□□□□ -0.47
EFHC1-232ENST00000637340 PCDHB13Q9Y5F0 798 aa12.12□□□□□ -0.47
EFHC1-232ENST00000637340 ABCA9Q8IUA7 1624 aa12.11□□□□□ -0.47
EFHC1-232ENST00000637340 DNM1LO00429 736 aa12.11□□□□□ -0.47
EFHC1-232ENST00000637340 AP1G2O75843 785 aa12.11□□□□□ -0.47
EFHC1-232ENST00000637340 FGGP02679 453 aa12.11□□□□□ -0.47
EFHC1-232ENST00000637340 CALM1P0DP23 149 aa12.11□□□□□ -0.47
EFHC1-232ENST00000637340 CALM2P0DP24 149 aa12.11□□□□□ -0.47
EFHC1-232ENST00000637340 CALM3P0DP25 149 aa12.11□□□□□ -0.47
EFHC1-232ENST00000637340 CHN1P15882 459 aa12.11□□□□□ -0.47
EFHC1-232ENST00000637340 SRBD1Q8N5C6 995 aaKnown RBP12.11□□□□□ -0.47
EFHC1-232ENST00000637340 CHMP6Q96FZ7 201 aa12.11□□□□□ -0.47
EFHC1-232ENST00000637340 DHTKD1Q96HY7 919 aaPredicted RBP12.11□□□□□ -0.47
EFHC1-232ENST00000637340 PRMT1Q99873 361 aaKnown RBP12.11□□□□□ -0.47
EFHC1-232ENST00000637340 TLR10Q9BXR5 811 aa12.11□□□□□ -0.47
EFHC1-232ENST00000637340 NOP53Q9NZM5 478 aaKnown RBP12.11□□□□□ -0.47
EFHC1-232ENST00000637340 TSKSQ9UJT2 592 aa12.11□□□□□ -0.47
EFHC1-232ENST00000637340 G3BP2Q9UN86 482 aaKnown RBP12.11□□□□□ -0.47
EFHC1-232ENST00000637340 BCS1LQ9Y276 419 aa12.11□□□□□ -0.47
EFHC1-232ENST00000637340 CIAO1O76071 339 aa12.11□□□□□ -0.47
EFHC1-232ENST00000637340 ACSL3O95573 720 aa12.11□□□□□ -0.47
EFHC1-232ENST00000637340 MTMR3Q13615 1198 aa12.11□□□□□ -0.47
EFHC1-232ENST00000637340 MAN2A1Q16706 1144 aa12.11□□□□□ -0.47
EFHC1-232ENST00000637340 PREPLQ4J6C6 727 aaPredicted RBP12.11□□□□□ -0.47
EFHC1-232ENST00000637340 FMO2Q99518 471 aa12.11□□□□□ -0.47
EFHC1-232ENST00000637340 INTUQ9ULD6 942 aa12.11□□□□□ -0.47
EFHC1-232ENST00000637340 IFT172Q9UG01 1749 aa12.11□□□□□ -0.47
EFHC1-232ENST00000637340 RFX7Q2KHR2 1363 aa12.11□□□□□ -0.47
EFHC1-232ENST00000637340 STK36Q9NRP7 1315 aa12.11□□□□□ -0.47
EFHC1-232ENST00000637340 PGRMC1O00264 195 aaKnown RBP12.11□□□□□ -0.47
EFHC1-232ENST00000637340 ZNF263O14978 683 aa12.11□□□□□ -0.47
EFHC1-232ENST00000637340 ZNF131P52739 623 aa12.11□□□□□ -0.47
EFHC1-232ENST00000637340 CCDC105Q8IYK2 499 aa12.11□□□□□ -0.47
EFHC1-232ENST00000637340 RPGRQ92834 1020 aaKnown RBP12.11□□□□□ -0.47
EFHC1-232ENST00000637340 GJA10Q969M2 543 aa12.11□□□□□ -0.47
EFHC1-232ENST00000637340 DDX23Q9BUQ8 820 aaKnown RBP12.11□□□□□ -0.47
EFHC1-232ENST00000637340 A0A1W2PQC6 194 aa12.1□□□□□ -0.47
EFHC1-232ENST00000637340 DCDC2CA8MYV0 355 aa12.1□□□□□ -0.47
EFHC1-232ENST00000637340 PCCAP05165 728 aaPredicted RBP12.1□□□□□ -0.47
EFHC1-232ENST00000637340 CTSWP56202 376 aa12.1□□□□□ -0.47
EFHC1-232ENST00000637340 ANKRD20A8PQ5CZ79 823 aa12.1□□□□□ -0.47
EFHC1-232ENST00000637340 DBR1Q9UK59 544 aaKnown RBP12.1□□□□□ -0.47
EFHC1-232ENST00000637340 STX2P32856 288 aa12.1□□□□□ -0.47
EFHC1-232ENST00000637340 CCNHP51946 323 aaPredicted RBP12.1□□□□□ -0.47
EFHC1-232ENST00000637340 TRIP13Q15645 432 aaPredicted RBP12.1□□□□□ -0.47
EFHC1-232ENST00000637340 ARMC3Q5W041 872 aa12.1□□□□□ -0.47
EFHC1-232ENST00000637340 LONP2Q86WA8 852 aa12.1□□□□□ -0.47
EFHC1-232ENST00000637340 STAG2Q8N3U4 1231 aa12.1□□□□□ -0.47
EFHC1-232ENST00000637340 CUL5Q93034 780 aa12.1□□□□□ -0.47
EFHC1-232ENST00000637340 IFT74Q96LB3 600 aa12.1□□□□□ -0.47
EFHC1-232ENST00000637340 SH3GL2Q99962 352 aa12.1□□□□□ -0.47
EFHC1-232ENST00000637340 POTEMA6NI47 508 aa12.1□□□□□ -0.47
EFHC1-232ENST00000637340 PPP1R12AO14974 1030 aaPredicted RBP12.1□□□□□ -0.47
EFHC1-232ENST00000637340 PRPF3O43395 683 aaKnown RBP12.1□□□□□ -0.47
EFHC1-232ENST00000637340 SHOX2O60902 331 aaPredicted RBP12.1□□□□□ -0.47
EFHC1-232ENST00000637340 ACTN1P12814 892 aa12.1□□□□□ -0.47
EFHC1-232ENST00000637340 FAM83BQ5T0W9 1011 aa12.1□□□□□ -0.47
EFHC1-232ENST00000637340 IRF2BP1Q8IU81 584 aa12.1□□□□□ -0.47
EFHC1-232ENST00000637340 PNMA1Q8ND90 353 aa12.1□□□□□ -0.47
EFHC1-232ENST00000637340 RAB34Q9BZG1 259 aa12.1□□□□□ -0.47
EFHC1-232ENST00000637340 ECT2Q9H8V3 914 aa12.1□□□□□ -0.47
EFHC1-232ENST00000637340 MTRF1LQ9UGC7 380 aaKnown RBP12.1□□□□□ -0.47
EFHC1-232ENST00000637340 SALL4Q9UJQ4 1053 aa12.1□□□□□ -0.47
EFHC1-232ENST00000637340 ANKRD26Q9UPS8 1709 aa12.1□□□□□ -0.47
EFHC1-232ENST00000637340 SMCO2A6NFE2 343 aa12.09□□□□□ -0.47
EFHC1-232ENST00000637340 OR52Z1P0C646 297 aa12.09□□□□□ -0.47
EFHC1-232ENST00000637340 ITGA4P13612 1032 aa12.09□□□□□ -0.47
EFHC1-232ENST00000637340 LMNTD2Q8IXW0 634 aa12.09□□□□□ -0.47
EFHC1-232ENST00000637340 LRRC34Q8IZ02 419 aa12.09□□□□□ -0.47
EFHC1-232ENST00000637340 SPDYE1Q8NFV5 336 aaPredicted RBP12.09□□□□□ -0.47
EFHC1-232ENST00000637340 MTRQ99707 1265 aa12.09□□□□□ -0.47
EFHC1-232ENST00000637340 CRNKL1Q9BZJ0 848 aaKnown RBP12.09□□□□□ -0.47
EFHC1-232ENST00000637340 CHORDC1Q9UHD1 332 aaPredicted RBP12.09□□□□□ -0.47
EFHC1-232ENST00000637340 PDS5AQ29RF7 1337 aaKnown RBP12.09□□□□□ -0.47
EFHC1-232ENST00000637340 FGFR4P22455 802 aa12.09□□□□□ -0.47
EFHC1-232ENST00000637340 MUM1Q2TAK8 710 aa12.09□□□□□ -0.47
EFHC1-232ENST00000637340 PHF20Q9BVI0 1012 aa12.09□□□□□ -0.47
EFHC1-232ENST00000637340 OSBPL7Q9BZF2 842 aa12.09□□□□□ -0.47
EFHC1-232ENST00000637340 ZCWPW1Q9H0M4 648 aa12.09□□□□□ -0.47
EFHC1-232ENST00000637340 ASIC3Q9UHC3 531 aa12.09□□□□□ -0.47
EFHC1-232ENST00000637340 SNX1Q13596 522 aa12.09□□□□□ -0.47
EFHC1-232ENST00000637340 NONOQ15233 471 aaKnown RBP eCLIP12.09□□□□□ -0.47
EFHC1-232ENST00000637340 MYOCDQ8IZQ8 938 aa12.09□□□□□ -0.47
EFHC1-232ENST00000637340 DYNLL2Q96FJ2 89 aa12.09□□□□□ -0.47
EFHC1-232ENST00000637340 TAOK3Q9H2K8 898 aa12.09□□□□□ -0.47
EFHC1-232ENST00000637340 MCM8Q9UJA3 840 aa12.09□□□□□ -0.47
EFHC1-232ENST00000637340 AMFRQ9UKV5 643 aa12.09□□□□□ -0.47
EFHC1-232ENST00000637340 NOC2LQ9Y3T9 749 aaKnown RBP12.09□□□□□ -0.47
EFHC1-232ENST00000637340 TBX22Q9Y458 520 aa12.09□□□□□ -0.47
EFHC1-232ENST00000637340 DAAM1Q9Y4D1 1078 aa12.09□□□□□ -0.47
EFHC1-232ENST00000637340 A0A087X0T9 212 aa12.08□□□□□ -0.47
EFHC1-232ENST00000637340 CCDC160A6NGH7 325 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms