RNA–Protein interactions for RNA: ENST00000636759.1

SCN1A-213, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 3,606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-213ENST00000636759 TUBP50607 506 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 FOXO4P98177 505 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 PDE4BQ07343 736 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 TRIM14Q14142 442 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 SLC44A4Q53GD3 710 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 PI16Q6UXB8 463 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 NKX2-3Q8TAU0 364 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 HAUS7Q99871 368 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 FSD1Q9BTV5 496 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 FAM192AQ9GZU8 254 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 ECT2Q9H8V3 914 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 ABHD10Q9NUJ1 306 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 ITGB1BP2Q9UKP3 347 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 INTUQ9ULD6 942 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 BARX2Q9UMQ3 279 aaPredicted RBP7.48□□□□□ -1.21
SCN1A-213ENST00000636759 CHMP2BQ9UQN3 213 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 ATP8A1Q9Y2Q0 1164 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 DAAM1Q9Y4D1 1078 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 TACC1O75410 805 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 FDPSP14324 419 aaKnown RBP7.48□□□□□ -1.21
SCN1A-213ENST00000636759 FXR1P51114 621 aaKnown RBP eCLIP7.48□□□□□ -1.21
SCN1A-213ENST00000636759 CCNG1P51959 295 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 ZNF131P52739 623 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 BPIFB4P59827 614 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 ERVK-24P63145 666 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 ITIH4Q14624 930 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 CCDC65Q8IXS2 484 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 DNAJC9Q8WXX5 260 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 CLMNQ96JQ2 1002 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 CORO1BQ9BR76 489 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 CCDC8Q9H0W5 538 aaPredicted RBP7.48□□□□□ -1.21
SCN1A-213ENST00000636759 PCDH18Q9HCL0 1135 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 LUC7LQ9NQ29 371 aaKnown RBP7.48□□□□□ -1.21
SCN1A-213ENST00000636759 CCDC87Q9NVE4 849 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 SH3GLB1Q9Y371 365 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 MACROD2A1Z1Q3 448 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 F8VZ95 297 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 SMAPO00193 183 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 ORC4O43929 436 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 TROVE2P10155 538 aaKnown RBP eCLIP7.48□□□□□ -1.21
SCN1A-213ENST00000636759 ADRA2BP18089 450 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 CYLC1P35663 651 aaPredicted RBP7.48□□□□□ -1.21
SCN1A-213ENST00000636759 IRGCQ6NXR0 463 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 OGFOD1Q8N543 542 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 RAB3IPQ96QF0 476 aaPredicted RBP7.48□□□□□ -1.21
SCN1A-213ENST00000636759 BRD8Q9H0E9 1235 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 TMBIM4Q9HC24 238 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 TUBGCP4Q9UGJ1 667 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 CIDEBQ9UHD4 219 aa7.48□□□□□ -1.21
SCN1A-213ENST00000636759 LRRC10BA6NIK2 292 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 MAP3K13O43283 966 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 CAPN15O75808 1086 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 KRT38O76015 456 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 GFPT2O94808 682 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 GYPCP04921 128 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 IL2RBP14784 551 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 DRD4P21917 467 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 GUCY2DQ02846 1103 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 FMR1Q06787 632 aaKnown RBP eCLIP7.47□□□□□ -1.21
SCN1A-213ENST00000636759 KIF5AQ12840 1032 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 TNNI3KQ59H18 835 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 NCCRP1Q6ZVX7 275 aaPredicted RBP7.47□□□□□ -1.21
SCN1A-213ENST00000636759 XAGE3Q8WTP9 111 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 LRRC45Q96CN5 670 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 HAUS1Q96CS2 278 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 OCEL1Q9H607 264 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 CNOT10Q9H9A5 744 aaKnown RBP7.47□□□□□ -1.21
SCN1A-213ENST00000636759 ARHGEF10LQ9HCE6 1279 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 EPB41L5Q9HCM4 733 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 LRRC42Q9Y546 428 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 FPGT-TNNI3KV9GXZ4 949 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 MYH6P13533 1939 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 E7ENQ6 273 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 HEXIM1O94992 359 aaKnown RBP7.47□□□□□ -1.21
SCN1A-213ENST00000636759 SKIP12755 728 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 TCP1P17987 556 aaKnown RBP7.47□□□□□ -1.21
SCN1A-213ENST00000636759 CTNNA1P35221 906 aaKnown RBP7.47□□□□□ -1.21
SCN1A-213ENST00000636759 INHBCP55103 352 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 CABP4P57796 275 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 ITIH3Q06033 890 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 ZNF827Q17R98 1081 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 P3H1Q32P28 736 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 COPS6Q7L5N1 327 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 KIF2BQ8N4N8 673 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 MTA3Q9BTC8 594 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 MIS12Q9H081 205 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 RAB17Q9H0T7 212 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 PRDM11Q9NQV5 511 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 RMND1Q9NWS8 449 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 ADAM22Q9P0K1 906 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 NOVA2Q9UNW9 492 aaKnown RBP7.47□□□□□ -1.21
SCN1A-213ENST00000636759 COL4A1P02462 1669 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 NBPF26B4DH59 902 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 KCNA3P22001 575 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 TNFRSF8P28908 595 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 MLH1P40692 756 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 PPARAQ07869 468 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 BYSLQ13895 437 aaKnown RBP7.47□□□□□ -1.21
SCN1A-213ENST00000636759 CCDC6Q16204 474 aa7.47□□□□□ -1.21
SCN1A-213ENST00000636759 LRIG3Q6UXM1 1119 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms