RNA–Protein interactions for RNA: ENST00000636709.1

CHRNA7-219, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 7,722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-219ENST00000636709 SESN3P58005 492 aa9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 CTTNQ14247 550 aaKnown RBP9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 KRT71Q3SY84 523 aa9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 ZNF394Q53GI3 561 aa9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 IFNLR1Q8IU57 520 aaPredicted RBP9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 NT5C1BQ96P26 610 aa9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 G3BP2Q9UN86 482 aaKnown RBP9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 RGS16O15492 202 aaPredicted RBP9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 MGEA5O60502 916 aa9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 VCPP55072 806 aaKnown RBP9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 ARHGAP4P98171 946 aa9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 MAP7D3Q8IWC1 876 aa9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 SNX19Q92543 992 aa9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 RAB17Q9H0T7 212 aa9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 SFI1A8K8P3 1242 aa9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 RRP9O43818 475 aaKnown RBP9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 THNSL1Q8IYQ7 743 aa9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 SH3KBP1Q96B97 665 aa9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 TDRD3Q9H7E2 651 aaKnown RBP9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 ELP3Q9H9T3 547 aa9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 DDX41Q9UJV9 622 aaKnown RBP9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 MLH3Q9UHC1 1453 aa9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 GTF2A1P52655 376 aaPredicted RBP9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 PTGDRQ13258 359 aa9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 SMAD1Q15797 465 aaKnown RBP9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 DBN1Q16643 649 aa9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 MLKLQ8NB16 471 aa9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 ACCSQ96QU6 501 aa9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 MSTO1Q9BUK6 570 aa9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 GH2P01242 217 aa9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 RHPN2Q8IUC4 686 aa9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 NDUFAF2Q8N183 169 aa9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 SERPINB13Q9UIV8 391 aa9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 MED23Q9ULK4 1368 aa9.63□□□□□ -0.87
CHRNA7-219ENST00000636709 ARHGEF37A1IGU5 675 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 TNPO2O14787 897 aaKnown RBP9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 BBOX1O75936 387 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 SERPINB6P35237 376 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 ARL4DP49703 201 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 CYP27A1Q02318 531 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 KCNA1Q09470 495 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 SYMPKQ92797 1274 aaKnown RBP9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 GPC4O75487 556 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 RPN1P04843 607 aaKnown RBP9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 MAPK4P31152 587 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 ASPRV1Q53RT3 343 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 PDCD7Q8N8D1 485 aaKnown RBP9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 ARHGEF1Q92888 912 aaKnown RBP9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 NR1H4Q96RI1 486 aaPredicted RBP9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 KRT1P04264 644 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 TSPY1Q01534 308 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 EXOC3L4Q17RC7 722 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 ATL3Q6DD88 541 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 SNRNP48Q6IEG0 339 aaKnown RBP9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 ARMCX2Q7L311 632 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 SMC5Q8IY18 1101 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 IFT43Q96FT9 208 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 MED7O43513 233 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 TROVE2P10155 538 aaKnown RBP eCLIP9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 HADHAP40939 763 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 BASP1P80723 227 aaKnown RBP9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 RCN2Q14257 317 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 CARD6Q9BX69 1037 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 UBE2TQ9NPD8 197 aaPredicted RBP9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 SCAF8Q9UPN6 1271 aaKnown RBP9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 ZMYM6O95789 1325 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 KDM2BQ8NHM5 1336 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 NDUFAB1O14561 156 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 INHBAP08476 426 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 IRF1P10914 325 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 U2AF2P26368 475 aaKnown RBP eCLIP9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 PBXIP1Q96AQ6 731 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 HAUS8Q9BT25 410 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 A0A0D9SFI3 127 aa9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 SSTR3P32745 418 aaPredicted RBP9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 CDC37Q16543 378 aaPredicted RBP9.62□□□□□ -0.87
CHRNA7-219ENST00000636709 RPRD2Q5VT52 1461 aaKnown RBP9.61□□□□□ -0.87
CHRNA7-219ENST00000636709 A0A0G2JLW4 131 aa9.61□□□□□ -0.87
CHRNA7-219ENST00000636709 PRPF4O43172 522 aaKnown RBP eCLIP9.61□□□□□ -0.87
CHRNA7-219ENST00000636709 GIGYF1O75420 1035 aaPredicted RBP9.61□□□□□ -0.87
CHRNA7-219ENST00000636709 LTKP29376 864 aa9.61□□□□□ -0.87
CHRNA7-219ENST00000636709 PPP2R5BQ15173 497 aa9.61□□□□□ -0.87
CHRNA7-219ENST00000636709 RC3H1Q5TC82 1133 aaKnown RBP9.61□□□□□ -0.87
CHRNA7-219ENST00000636709 MCTP2Q6DN12 878 aa9.61□□□□□ -0.87
CHRNA7-219ENST00000636709 CXorf38Q8TB03 319 aa9.61□□□□□ -0.87
CHRNA7-219ENST00000636709 DEPDC1BQ8WUY9 529 aa9.61□□□□□ -0.87
CHRNA7-219ENST00000636709 KANSL2Q9H9L4 492 aa9.61□□□□□ -0.87
CHRNA7-219ENST00000636709 ZBTB40Q9NUA8 1239 aa9.61□□□□□ -0.87
CHRNA7-219ENST00000636709 FARP1Q9Y4F1 1045 aaPredicted RBP9.61□□□□□ -0.87
CHRNA7-219ENST00000636709 ABCB11O95342 1321 aa9.61□□□□□ -0.87
CHRNA7-219ENST00000636709 FGAP02671 866 aa9.61□□□□□ -0.87
CHRNA7-219ENST00000636709 SERPIND1P05546 499 aa9.61□□□□□ -0.87
CHRNA7-219ENST00000636709 EEF1GP26641 437 aaKnown RBP9.61□□□□□ -0.87
CHRNA7-219ENST00000636709 CTNNA1P35221 906 aaKnown RBP9.61□□□□□ -0.87
CHRNA7-219ENST00000636709 PHEXP78562 749 aa9.61□□□□□ -0.87
CHRNA7-219ENST00000636709 ARL13BQ3SXY8 428 aa9.61□□□□□ -0.87
CHRNA7-219ENST00000636709 TTC19Q6DKK2 380 aaPredicted RBP9.61□□□□□ -0.87
CHRNA7-219ENST00000636709 PRIMPOLQ96LW4 560 aa9.61□□□□□ -0.87
CHRNA7-219ENST00000636709 SPECC1L-ADORA2AF8WAN1 911 aa9.61□□□□□ -0.87
CHRNA7-219ENST00000636709 MCF2LO15068 1137 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms