RNA–Protein interactions for RNA: ENST00000636554.1

THUMPD1-206, Transcript of THUMP domain containing 1, humanhuman

TSL 5

Gene THUMPD1, Length 2,567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-206ENST00000636554 TMEM260Q9NX78 707 aa16.53■□□□□ 0.24
THUMPD1-206ENST00000636554 PLAAQ9Y263 795 aa16.53■□□□□ 0.24
THUMPD1-206ENST00000636554 DOT1LQ8TEK3 1739 aa16.53■□□□□ 0.24
THUMPD1-206ENST00000636554 SSU72P8A0A1W2PR75 194 aa16.53■□□□□ 0.24
THUMPD1-206ENST00000636554 SMCO2A6NFE2 343 aa16.53■□□□□ 0.24
THUMPD1-206ENST00000636554 NOL4O94818 638 aa16.53■□□□□ 0.24
THUMPD1-206ENST00000636554 TSPY3P0CV98 308 aa16.53■□□□□ 0.24
THUMPD1-206ENST00000636554 TSPY8P0CW00 308 aa16.53■□□□□ 0.24
THUMPD1-206ENST00000636554 ITGB3BPQ13352 177 aaPredicted RBP16.53■□□□□ 0.24
THUMPD1-206ENST00000636554 RNF10Q8N5U6 811 aaKnown RBP16.53■□□□□ 0.24
THUMPD1-206ENST00000636554 OR2W6PQ8NHA6 318 aa16.53■□□□□ 0.24
THUMPD1-206ENST00000636554 LARP4BQ92615 738 aaKnown RBP16.53■□□□□ 0.24
THUMPD1-206ENST00000636554 TMEM47Q9BQJ4 181 aa16.53■□□□□ 0.24
THUMPD1-206ENST00000636554 CENPHQ9H3R5 247 aa16.53■□□□□ 0.24
THUMPD1-206ENST00000636554 GOLPH3Q9H4A6 298 aa16.53■□□□□ 0.24
THUMPD1-206ENST00000636554 KLRF2D3W0D1 207 aa16.52■□□□□ 0.24
THUMPD1-206ENST00000636554 RBAK-RBAKDNI3L0D1 243 aa16.52■□□□□ 0.24
THUMPD1-206ENST00000636554 MDH1P40925 334 aaKnown RBP16.52■□□□□ 0.24
THUMPD1-206ENST00000636554 GNAQP50148 359 aa16.52■□□□□ 0.24
THUMPD1-206ENST00000636554 RNF187Q5TA31 235 aaPredicted RBP16.52■□□□□ 0.24
THUMPD1-206ENST00000636554 C12orf60Q5U649 245 aa16.52■□□□□ 0.24
THUMPD1-206ENST00000636554 KRT25Q7Z3Z0 450 aa16.52■□□□□ 0.24
THUMPD1-206ENST00000636554 KCNK18Q7Z418 384 aa16.52■□□□□ 0.24
THUMPD1-206ENST00000636554 CCDC91Q7Z6B0 441 aa16.52■□□□□ 0.24
THUMPD1-206ENST00000636554 FBXO33Q7Z6M2 555 aa16.52■□□□□ 0.24
THUMPD1-206ENST00000636554 NLRP14Q86W24 1093 aa16.52■□□□□ 0.24
THUMPD1-206ENST00000636554 GUF1Q8N442 669 aaKnown RBP16.52■□□□□ 0.24
THUMPD1-206ENST00000636554 MREGQ8N565 214 aa16.52■□□□□ 0.24
THUMPD1-206ENST00000636554 PROCA1Q8NCQ7 364 aaPredicted RBP16.52■□□□□ 0.24
THUMPD1-206ENST00000636554 CABS1Q96KC9 395 aa16.52■□□□□ 0.24
THUMPD1-206ENST00000636554 CCT8L2Q96SF2 557 aa16.52■□□□□ 0.24
THUMPD1-206ENST00000636554 NUDT12Q9BQG2 462 aa16.52■□□□□ 0.24
THUMPD1-206ENST00000636554 MKNK2Q9HBH9 465 aa16.52■□□□□ 0.24
THUMPD1-206ENST00000636554 BIN2Q9UBW5 565 aaPredicted RBP16.52■□□□□ 0.24
THUMPD1-206ENST00000636554 TSKSQ9UJT2 592 aa16.52■□□□□ 0.24
THUMPD1-206ENST00000636554 PALM3A6NDB9 673 aaPredicted RBP16.52■□□□□ 0.23
THUMPD1-206ENST00000636554 A6NNZ2 444 aa16.52■□□□□ 0.23
THUMPD1-206ENST00000636554 POLR2FP61218 127 aaKnown RBP16.52■□□□□ 0.23
THUMPD1-206ENST00000636554 SF3B2Q13435 895 aaKnown RBP16.52■□□□□ 0.23
THUMPD1-206ENST00000636554 TUBB8Q3ZCM7 444 aa16.52■□□□□ 0.23
THUMPD1-206ENST00000636554 SLC9C1Q4G0N8 1177 aa16.52■□□□□ 0.23
THUMPD1-206ENST00000636554 TBC1D5Q92609 795 aa16.52■□□□□ 0.23
THUMPD1-206ENST00000636554 MYH4Q9Y623 1939 aa16.52■□□□□ 0.23
THUMPD1-206ENST00000636554 E7EVH7 732 aa16.51■□□□□ 0.23
THUMPD1-206ENST00000636554 ITPK1Q13572 414 aa16.51■□□□□ 0.23
THUMPD1-206ENST00000636554 FAM83BQ5T0W9 1011 aa16.51■□□□□ 0.23
THUMPD1-206ENST00000636554 DNAAF5Q86Y56 855 aa16.51■□□□□ 0.23
THUMPD1-206ENST00000636554 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.51■□□□□ 0.23
THUMPD1-206ENST00000636554 LSM14BQ9BX40 385 aaKnown RBP16.51■□□□□ 0.23
THUMPD1-206ENST00000636554 VAT1LQ9HCJ6 419 aa16.51■□□□□ 0.23
THUMPD1-206ENST00000636554 A0A087X0T9 212 aa16.51■□□□□ 0.23
THUMPD1-206ENST00000636554 SLC37A4O43826 429 aa16.51■□□□□ 0.23
THUMPD1-206ENST00000636554 FAM228BP0C875 321 aa16.51■□□□□ 0.23
THUMPD1-206ENST00000636554 LRRC63Q05C16 580 aa16.51■□□□□ 0.23
THUMPD1-206ENST00000636554 IFT88Q13099 833 aa16.51■□□□□ 0.23
THUMPD1-206ENST00000636554 NAB2Q15742 525 aa16.51■□□□□ 0.23
THUMPD1-206ENST00000636554 MEI1Q5TIA1 1274 aa16.51■□□□□ 0.23
THUMPD1-206ENST00000636554 SFMBT2Q5VUG0 894 aa16.51■□□□□ 0.23
THUMPD1-206ENST00000636554 TXNRD3Q86VQ6 643 aa16.51■□□□□ 0.23
THUMPD1-206ENST00000636554 CD302Q8IX05 232 aa16.51■□□□□ 0.23
THUMPD1-206ENST00000636554 FGFBP2Q9BYJ0 223 aa16.51■□□□□ 0.23
THUMPD1-206ENST00000636554 CD248Q9HCU0 757 aa16.51■□□□□ 0.23
THUMPD1-206ENST00000636554 PPANQ9NQ55 473 aaKnown RBP16.51■□□□□ 0.23
THUMPD1-206ENST00000636554 ABCB11O95342 1321 aa16.5■□□□□ 0.23
THUMPD1-206ENST00000636554 GRID2IPA4D2P6 1211 aa16.5■□□□□ 0.23
THUMPD1-206ENST00000636554 ECHS1P30084 290 aa16.5■□□□□ 0.23
THUMPD1-206ENST00000636554 USP8P40818 1118 aa16.5■□□□□ 0.23
THUMPD1-206ENST00000636554 ERVK-9P63128 1117 aa16.5■□□□□ 0.23
THUMPD1-206ENST00000636554 HLTFQ14527 1009 aaKnown RBP eCLIP16.5■□□□□ 0.239e-6■□□□□ 9.4
THUMPD1-206ENST00000636554 KIAA0753Q2KHM9 967 aa16.5■□□□□ 0.23
THUMPD1-206ENST00000636554 USP17L2Q6R6M4 530 aa16.5■□□□□ 0.23
THUMPD1-206ENST00000636554 SH3RF3Q8TEJ3 882 aaPredicted RBP16.5■□□□□ 0.23
THUMPD1-206ENST00000636554 ANKS1AQ92625 1134 aa16.5■□□□□ 0.23
THUMPD1-206ENST00000636554 DDX12PQ92771 950 aa16.5■□□□□ 0.23
THUMPD1-206ENST00000636554 JPH2Q9BR39 696 aaPredicted RBP16.5■□□□□ 0.23
THUMPD1-206ENST00000636554 CEP72Q9P209 647 aa16.5■□□□□ 0.23
THUMPD1-206ENST00000636554 ADAMTS1Q9UHI8 967 aa16.5■□□□□ 0.23
THUMPD1-206ENST00000636554 PCDHGC5Q9Y5F6 944 aa16.5■□□□□ 0.23
THUMPD1-206ENST00000636554 TDP2O95551 362 aa16.5■□□□□ 0.23
THUMPD1-206ENST00000636554 SERPING1P05155 500 aa16.5■□□□□ 0.23
THUMPD1-206ENST00000636554 RAPGEF1Q13905 1077 aa16.5■□□□□ 0.23
THUMPD1-206ENST00000636554 CDC37Q16543 378 aaPredicted RBP16.5■□□□□ 0.23
THUMPD1-206ENST00000636554 DDX42Q86XP3 938 aaKnown RBP eCLIP16.5■□□□□ 0.23
THUMPD1-206ENST00000636554 DZIP1Q86YF9 867 aaKnown RBP16.5■□□□□ 0.23
THUMPD1-206ENST00000636554 ACSBG1Q96GR2 724 aa16.5■□□□□ 0.23
THUMPD1-206ENST00000636554 CDK5RAP3Q96JB5 506 aa16.5■□□□□ 0.23
THUMPD1-206ENST00000636554 PAGR1Q9BTK6 254 aa16.5■□□□□ 0.23
THUMPD1-206ENST00000636554 RNF14Q9UBS8 474 aa16.5■□□□□ 0.23
THUMPD1-206ENST00000636554 GSCP56915 257 aaPredicted RBP16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 SPRED3Q2MJR0 410 aa16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 CCDC40Q4G0X9 1142 aa16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 BICDL1Q6ZP65 573 aa16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 SLC51AQ86UW1 340 aa16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 FAM133AQ8N9E0 248 aa16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 USP38Q8NB14 1042 aa16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 WHAMMQ8TF30 809 aa16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 TBC1D7Q9P0N9 293 aa16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 ATP6V0A2Q9Y487 856 aa16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 MAST2Q6P0Q8 1798 aa16.49■□□□□ 0.23
THUMPD1-206ENST00000636554 PVALEFA0A1B0GWK0 134 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms