RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 GRIN2CQ14957 1233 aa20.66■□□□□ 0.9
PNKP-225ENST00000636214 NECTIN1Q15223 517 aa20.66■□□□□ 0.9
PNKP-225ENST00000636214 KIAA0753Q2KHM9 967 aa20.66■□□□□ 0.9
PNKP-225ENST00000636214 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.66■□□□□ 0.9
PNKP-225ENST00000636214 SCN5AQ14524 2016 aa20.66■□□□□ 0.9
PNKP-225ENST00000636214 TANC1Q9C0D5 1861 aa20.65■□□□□ 0.9
PNKP-225ENST00000636214 PPFIA4O75335 1185 aa20.65■□□□□ 0.9
PNKP-225ENST00000636214 RGS20O76081 388 aa20.65■□□□□ 0.9
PNKP-225ENST00000636214 PLEKHA8P1O95397 391 aa20.65■□□□□ 0.9
PNKP-225ENST00000636214 F2P00734 622 aa20.65■□□□□ 0.9
PNKP-225ENST00000636214 ATP2A2P16615 1042 aaKnown RBP20.65■□□□□ 0.9
PNKP-225ENST00000636214 RXRAP19793 462 aa20.65■□□□□ 0.9
PNKP-225ENST00000636214 MYSM1Q5VVJ2 828 aa20.65■□□□□ 0.9
PNKP-225ENST00000636214 GDF6Q6KF10 455 aaPredicted RBP20.65■□□□□ 0.9
PNKP-225ENST00000636214 MICU3Q86XE3 530 aa20.65■□□□□ 0.9
PNKP-225ENST00000636214 AFAP1L1Q8TED9 768 aa20.65■□□□□ 0.9
PNKP-225ENST00000636214 KAT2BQ92831 832 aa20.65■□□□□ 0.9
PNKP-225ENST00000636214 LRRC2Q9BYS8 371 aa20.65■□□□□ 0.9
PNKP-225ENST00000636214 HDAC6Q9UBN7 1215 aa20.65■□□□□ 0.9
PNKP-225ENST00000636214 GTF2IRD1Q9UHL9 959 aa20.65■□□□□ 0.9
PNKP-225ENST00000636214 IQCF3P0C7M6 154 aa20.64■□□□□ 0.89
PNKP-225ENST00000636214 NEDD9Q14511 834 aa20.64■□□□□ 0.89
PNKP-225ENST00000636214 ZFP91Q96JP5 570 aaPredicted RBP20.64■□□□□ 0.89
PNKP-225ENST00000636214 NEK1Q96PY6 1258 aa20.64■□□□□ 0.89
PNKP-225ENST00000636214 NKX2-4Q9H2Z4 354 aa20.64■□□□□ 0.89
PNKP-225ENST00000636214 CDH23Q9H251 3354 aa20.63■□□□□ 0.89
PNKP-225ENST00000636214 FRMPD4Q14CM0 1322 aa20.63■□□□□ 0.89
PNKP-225ENST00000636214 PARNO95453 639 aaKnown RBP20.63■□□□□ 0.89
PNKP-225ENST00000636214 KCNJ6P48051 423 aa20.63■□□□□ 0.89
PNKP-225ENST00000636214 KRT32Q14532 448 aa20.63■□□□□ 0.89
PNKP-225ENST00000636214 XRRA1Q6P2D8 792 aa20.63■□□□□ 0.89
PNKP-225ENST00000636214 USP17L6PQ6QN14 398 aa20.63■□□□□ 0.89
PNKP-225ENST00000636214 NLRX1Q86UT6 975 aa20.63■□□□□ 0.89
PNKP-225ENST00000636214 RAB11FIP4Q86YS3 637 aa20.63■□□□□ 0.89
PNKP-225ENST00000636214 SRBD1Q8N5C6 995 aaKnown RBP20.63■□□□□ 0.89
PNKP-225ENST00000636214 FANCBQ8NB91 859 aa20.63■□□□□ 0.89
PNKP-225ENST00000636214 PSTPIP2Q9H939 334 aa20.63■□□□□ 0.89
PNKP-225ENST00000636214 GBF1Q92538 1859 aa20.62■□□□□ 0.89
PNKP-225ENST00000636214 PIK3CDO00329 1044 aa20.62■□□□□ 0.89
PNKP-225ENST00000636214 FIBPO43427 364 aa20.62■□□□□ 0.89
PNKP-225ENST00000636214 SELPP16109 830 aa20.62■□□□□ 0.89
PNKP-225ENST00000636214 FGD1P98174 961 aa20.62■□□□□ 0.89
PNKP-225ENST00000636214 HSDL1Q3SXM5 330 aa20.62■□□□□ 0.89
PNKP-225ENST00000636214 PPP2R2DQ66LE6 453 aa20.62■□□□□ 0.89
PNKP-225ENST00000636214 SGMS1Q86VZ5 419 aa20.62■□□□□ 0.89
PNKP-225ENST00000636214 SKAP1Q86WV1 359 aa20.62■□□□□ 0.89
PNKP-225ENST00000636214 CMTR1Q8N1G2 835 aaKnown RBP20.62■□□□□ 0.89
PNKP-225ENST00000636214 CCDC82Q8N4S0 544 aa20.62■□□□□ 0.89
PNKP-225ENST00000636214 CCDC136Q96JN2 1154 aa20.62■□□□□ 0.89
PNKP-225ENST00000636214 SLC9A7Q96T83 725 aa20.62■□□□□ 0.89
PNKP-225ENST00000636214 EHMT1Q9H9B1 1298 aa20.62■□□□□ 0.89
PNKP-225ENST00000636214 RBM28Q9NW13 759 aaKnown RBP20.62■□□□□ 0.89
PNKP-225ENST00000636214 RTEL1Q9NZ71 1219 aa20.62■□□□□ 0.89
PNKP-225ENST00000636214 PCDHA11Q9Y5I1 949 aa20.62■□□□□ 0.89
PNKP-225ENST00000636214 SPDYE3A6NKU9 549 aa20.61■□□□□ 0.89
PNKP-225ENST00000636214 KIF28PB7ZC32 967 aa20.61■□□□□ 0.89
PNKP-225ENST00000636214 HOXD8P13378 290 aaPredicted RBP20.61■□□□□ 0.89
PNKP-225ENST00000636214 RABGGTBP53611 331 aa20.61■□□□□ 0.89
PNKP-225ENST00000636214 SP2Q02086 613 aa20.61■□□□□ 0.89
PNKP-225ENST00000636214 PTK7Q13308 1070 aa20.61■□□□□ 0.89
PNKP-225ENST00000636214 PCNX4Q63HM2 1172 aa20.61■□□□□ 0.89
PNKP-225ENST00000636214 TMTC3Q6ZXV5 915 aa20.61■□□□□ 0.89
PNKP-225ENST00000636214 LRRC8DQ7L1W4 858 aa20.61■□□□□ 0.89
PNKP-225ENST00000636214 GPKOWQ92917 476 aaPredicted RBP eCLIP20.61■□□□□ 0.89
PNKP-225ENST00000636214 INPP4AQ96PE3 977 aaPredicted RBP20.61■□□□□ 0.89
PNKP-225ENST00000636214 PRDM12Q9H4Q4 367 aa20.61■□□□□ 0.89
PNKP-225ENST00000636214 UNC80Q8N2C7 3258 aa20.6■□□□□ 0.89
PNKP-225ENST00000636214 HAS3O00219 553 aa20.6■□□□□ 0.89
PNKP-225ENST00000636214 BAIAP3O94812 1187 aa20.6■□□□□ 0.89
PNKP-225ENST00000636214 ICAM3P32942 547 aa20.6■□□□□ 0.89
PNKP-225ENST00000636214 MRPS9P82933 396 aaKnown RBP20.6■□□□□ 0.89
PNKP-225ENST00000636214 METTL7BQ6UX53 244 aa20.6■□□□□ 0.89
PNKP-225ENST00000636214 CYFIP1Q7L576 1253 aa20.6■□□□□ 0.89
PNKP-225ENST00000636214 HEATR3Q7Z4Q2 680 aa20.6■□□□□ 0.89
PNKP-225ENST00000636214 CDHR1Q96JP9 859 aa20.6■□□□□ 0.89
PNKP-225ENST00000636214 ZNF215Q9UL58 517 aaPredicted RBP20.6■□□□□ 0.89
PNKP-225ENST00000636214 TET1Q8NFU7 2136 aa20.6■□□□□ 0.89
PNKP-225ENST00000636214 C17orf102A2RUQ5 167 aa20.59■□□□□ 0.89
PNKP-225ENST00000636214 H3BRB1 525 aa20.59■□□□□ 0.89
PNKP-225ENST00000636214 MEIS2O14770 477 aa20.59■□□□□ 0.89
PNKP-225ENST00000636214 HMGB1P09429 215 aaKnown RBP20.59■□□□□ 0.89
PNKP-225ENST00000636214 DHX32Q7L7V1 743 aaKnown RBP20.59■□□□□ 0.89
PNKP-225ENST00000636214 GIMAP8Q8ND71 665 aaPredicted RBP20.59■□□□□ 0.89
PNKP-225ENST00000636214 PHOSPHO2Q8TCD6 241 aa20.59■□□□□ 0.89
PNKP-225ENST00000636214 USP26Q9BXU7 913 aa20.59■□□□□ 0.89
PNKP-225ENST00000636214 TUT1Q9H6E5 874 aaKnown RBP20.59■□□□□ 0.89
PNKP-225ENST00000636214 NAP1L2Q9ULW6 460 aaPredicted RBP20.59■□□□□ 0.89
PNKP-225ENST00000636214 YBX2Q9Y2T7 364 aaKnown RBP20.59■□□□□ 0.89
PNKP-225ENST00000636214 hCG_1642624A0A1W2PR95 340 aa20.58■□□□□ 0.89
PNKP-225ENST00000636214 SPATA31C2B4DYI2 1134 aa20.58■□□□□ 0.89
PNKP-225ENST00000636214 ZBTB43O43298 467 aa20.58■□□□□ 0.89
PNKP-225ENST00000636214 LGALS2P05162 132 aa20.58■□□□□ 0.89
PNKP-225ENST00000636214 CKBP12277 381 aa20.58■□□□□ 0.89
PNKP-225ENST00000636214 IGFBP4P22692 258 aa20.58■□□□□ 0.89
PNKP-225ENST00000636214 SP4Q02446 784 aa20.58■□□□□ 0.89
PNKP-225ENST00000636214 RBL2Q08999 1139 aa20.58■□□□□ 0.89
PNKP-225ENST00000636214 RTN1Q16799 776 aa20.58■□□□□ 0.89
PNKP-225ENST00000636214 APOA5Q6Q788 366 aa20.58■□□□□ 0.89
PNKP-225ENST00000636214 DHX38Q92620 1227 aaKnown RBP20.58■□□□□ 0.89
PNKP-225ENST00000636214 KAT6AQ92794 2004 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms