RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 CDC25BP30305 580 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 CXCL9Q07325 125 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 KCNA1Q09470 495 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 MTMR2Q13614 643 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 ODR4Q5SWX8 454 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 NAA35Q5VZE5 725 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 ARL6IP4Q66PJ3 421 aaKnown RBP8.31□□□□□ -1.08
PKP4-217ENST00000628904 CIAPIN1Q6FI81 312 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 CYP26C1Q6V0L0 522 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 SH3BP5LQ7L8J4 393 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 DYDC2Q96IM9 177 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 TCHPQ9BT92 498 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 ZNF70Q9UC06 446 aaPredicted RBP8.31□□□□□ -1.08
PKP4-217ENST00000628904 ADAMTS1Q9UHI8 967 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 RWDD2AQ9UIY3 292 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 PLEKHG2Q9H7P9 1386 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 PARP4Q9UKK3 1724 aaKnown RBP8.31□□□□□ -1.08
PKP4-217ENST00000628904 STRCQ7RTU9 1775 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 MYO5AQ9Y4I1 1855 aaKnown RBP8.31□□□□□ -1.08
PKP4-217ENST00000628904 ARHGEF35A5YM69 484 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 WRNIP1Q96S55 665 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 PYM1Q9BRP8 204 aaKnown RBP8.31□□□□□ -1.08
PKP4-217ENST00000628904 TRIM31Q9BZY9 425 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 TAOK3Q9H2K8 898 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 DHX36Q9H2U1 1008 aaKnown RBP8.31□□□□□ -1.08
PKP4-217ENST00000628904 EMILIN3Q9NT22 766 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 MKRN1Q9UHC7 482 aaKnown RBP8.31□□□□□ -1.08
PKP4-217ENST00000628904 ZNF185O15231 689 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 NCK2O43639 380 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 STX10O60499 249 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 EXOC3O60645 756 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 GTF2F1P35269 517 aaKnown RBP eCLIP8.31□□□□□ -1.082e-13■■■□□ 16.7
PKP4-217ENST00000628904 CYLC1P35663 651 aaPredicted RBP8.31□□□□□ -1.08
PKP4-217ENST00000628904 HMGCS2P54868 508 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 SOX10P56693 466 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 GRB10Q13322 594 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 RRP1BQ14684 758 aaKnown RBP8.31□□□□□ -1.08
PKP4-217ENST00000628904 NR1I3Q14994 352 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 DALRD3Q5D0E6 543 aaKnown RBP8.31□□□□□ -1.08
PKP4-217ENST00000628904 FAM114A1Q8IWE2 563 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 MICALL2Q8IY33 904 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 MB21D1Q8N884 522 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 LRRC15Q8TF66 581 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 IFT81Q8WYA0 676 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 IFIH1Q9BYX4 1025 aaKnown RBP8.31□□□□□ -1.08
PKP4-217ENST00000628904 SUGCTQ9HAC7 445 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 MLXIPQ9HAP2 919 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 GOPCQ9HD26 462 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 PICK1Q9NRD5 415 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 ABHD10Q9NUJ1 306 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 EHD2Q9NZN4 543 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 PIM2Q9P1W9 311 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 RABGAP1Q9Y3P9 1069 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 PHLPP1O60346 1717 aa8.31□□□□□ -1.08
PKP4-217ENST00000628904 CTAGE15A4D2H0 777 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 KIF2AO00139 706 aaPredicted RBP8.3□□□□□ -1.08
PKP4-217ENST00000628904 CETN3O15182 167 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 MED24O75448 989 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 CTAGE8P0CG41 777 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 MAGEA1P43355 309 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 GFPT1Q06210 699 aaPredicted RBP8.3□□□□□ -1.08
PKP4-217ENST00000628904 FAM102BQ5T8I3 360 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 CTAGE6Q86UF2 777 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 TICAM2Q86XR7 235 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 CTAGE4Q8IX94 777 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 LRP6O75581 1613 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 FAM86B1E9PN63 330 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 MOCS3O95396 460 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 FTCDO95954 541 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 FAM86B2P0C5J1 330 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 TRIM49P0CI25 452 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 TRIM49CP0CI26 452 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 DLATP10515 647 aaKnown RBP8.3□□□□□ -1.08
PKP4-217ENST00000628904 CCNE1P24864 410 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 SLC7A5Q01650 507 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 COASYQ13057 564 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 HAUS3Q68CZ6 603 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 GJB7Q6PEY0 223 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 ADSSL1Q8N142 457 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 PPP1R13LQ8WUF5 828 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 KIFC3Q9BVG8 833 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 NDST4Q9H3R1 872 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 NFIBO00712 420 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 HOXA10P31260 410 aaPredicted RBP8.3□□□□□ -1.08
PKP4-217ENST00000628904 EIF4A3P38919 411 aaKnown RBP8.3□□□□□ -1.08
PKP4-217ENST00000628904 TNIP1Q15025 636 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 NBPF12Q5TAG4 269 aaPredicted RBP8.3□□□□□ -1.08
PKP4-217ENST00000628904 SEPT14Q6ZU15 432 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 FAM178BQ8IXR5 827 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 TNFRSF25Q93038 417 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 ERO1AQ96HE7 468 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 CEP89Q96ST8 783 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 CGNQ9P2M7 1197 aaKnown RBP8.3□□□□□ -1.08
PKP4-217ENST00000628904 DOT1LQ8TEK3 1739 aa8.3□□□□□ -1.08
PKP4-217ENST00000628904 KRT86O43790 486 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 MYBP10242 640 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 MARK3P27448 753 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 ERVK-24P63145 666 aa8.29□□□□□ -1.08
PKP4-217ENST00000628904 HLTFQ14527 1009 aaKnown RBP eCLIP8.29□□□□□ -1.081e-6■■□□□ 11.4
PKP4-217ENST00000628904 HSP90B2PQ58FF3 399 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms