RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 PANK2Q9BZ23 570 aa8.49□□□□□ -1.05
PTP4A1-206ENST00000627002 NAT10Q9H0A0 1025 aaKnown RBP8.49□□□□□ -1.05
PTP4A1-206ENST00000627002 SPATC1LQ9H0A9 340 aa8.49□□□□□ -1.05
PTP4A1-206ENST00000627002 RBSNQ9H1K0 784 aa8.49□□□□□ -1.05
PTP4A1-206ENST00000627002 STK17AQ9UEE5 414 aa8.49□□□□□ -1.05
PTP4A1-206ENST00000627002 TUBE1Q9UJT0 475 aa8.49□□□□□ -1.05
PTP4A1-206ENST00000627002 RIPK3Q9Y572 518 aa8.49□□□□□ -1.05
PTP4A1-206ENST00000627002 PFASO15067 1338 aa8.49□□□□□ -1.05
PTP4A1-206ENST00000627002 KDM3AQ9Y4C1 1321 aa8.49□□□□□ -1.05
PTP4A1-206ENST00000627002 TMEM88BA6NKF7 163 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 PP2D1A8MPX8 630 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 MEIS1O00470 390 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 MSH4O15457 936 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 PLCG1P19174 1290 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 CCND2P30279 289 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 CDC25AP30304 524 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 NLRP12P59046 1061 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 SEMA3FQ13275 785 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 PNOCQ13519 176 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 BAATQ14032 418 aaPredicted RBP8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 ANO6Q4KMQ2 910 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 NT5DC1Q5TFE4 455 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 SPRYD7Q5W111 196 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 HAUS3Q68CZ6 603 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 PDXDC2PQ6P474 469 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 ANKRD23Q86SG2 305 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 PLA2G4DQ86XP0 818 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 TRIML1Q8N9V2 468 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 DNERQ8NFT8 737 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 ERMNQ8TAM6 284 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 FAM200AQ8TCP9 573 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 NSUN6Q8TEA1 469 aaKnown RBP8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 SNX29Q8TEQ0 813 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 SMARCE1Q969G3 411 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 PAGE5Q96GU1 130 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 MS4A4AQ96JQ5 239 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 TAAR1Q96RJ0 339 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 RMDN3Q96TC7 470 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 NT5C3AQ9H0P0 336 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 PXMP2Q9NR77 195 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 CYP39A1Q9NYL5 469 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 BTBD7Q9P203 1132 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 COL20A1Q9P218 1284 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 PCDHB8Q9UN66 801 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 PCDHA5Q9Y5H7 936 aa8.48□□□□□ -1.05
PTP4A1-206ENST00000627002 CCL15-CCL14A0A0B4J2E2 113 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 POTEMA6NI47 508 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 B4DLN1 442 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 MAFGO15525 162 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 GTPBP6O43824 516 aaPredicted RBP8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 CNMDO75829 334 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 STAM2O75886 525 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 EIF2AK2P19525 551 aaKnown RBP8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 CCT6AP40227 531 aaKnown RBP8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 AFMP43652 599 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 SARSP49591 514 aaKnown RBP8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 ZNF165P49910 485 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 LBX1P52954 281 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 HUNKP57058 714 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 UBXN2AP68543 259 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 AMPD3Q01432 767 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 MAP2K1Q02750 393 aaPredicted RBP8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 PGM5Q15124 567 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 CCL15Q16663 113 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 TMEM119Q4V9L6 283 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 HYIQ5T013 277 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 LRCH2Q5VUJ6 765 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 CST9Q5W186 159 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 ANKRD35Q8N283 1001 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 KCTD17Q8N5Z5 321 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 RNF214Q8ND24 703 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 SPATA20Q8TB22 786 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 SLC5A5Q92911 643 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 GSDMAQ96QA5 445 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 IWS1Q96ST2 819 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 RIT2Q99578 217 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 BPIFA3Q9BQP9 254 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 PDCD2LQ9BRP1 358 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 ZNF577Q9BSK1 485 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 PAGR1Q9BTK6 254 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 MMTAG2Q9BU76 263 aaKnown RBP8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 GTPBP4Q9BZE4 634 aaKnown RBP8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 WDR11Q9BZH6 1224 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 LRRC27Q9C0I9 530 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 A1CFQ9NQ94 594 aaKnown RBP8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 JADE2Q9NQC1 790 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 RMND1Q9NWS8 449 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 PCDH10Q9P2E7 1040 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 DACH1Q9UI36 760 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 UBIAD1Q9Y5Z9 338 aa8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 POLR2AP24928 1970 aaKnown RBP8.47□□□□□ -1.05
PTP4A1-206ENST00000627002 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 BTBD19C9JJ37 291 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 PDHXO00330 501 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 IPO5O00410 1097 aaKnown RBP8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 GAS7O60861 476 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 PSMD10O75832 226 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 C7P10643 843 aa8.46□□□□□ -1.06
PTP4A1-206ENST00000627002 XRCC6P12956 609 aaKnown RBP eCLIP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms