RNA–Protein interactions for RNA: ENST00000626716.1

R3HDM4-208, Transcript of R3H domain containing 4, humanhuman

TSL 5 BASIC

Gene R3HDM4, Length 138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-208ENST00000626716 CELF3Q5SZQ8 465 aaKnown RBP29.29■■■□□ 2.28
R3HDM4-208ENST00000626716 PIGSQ96S52 555 aa29.29■■■□□ 2.28
R3HDM4-208ENST00000626716 MTCH2Q9Y6C9 303 aa29.29■■■□□ 2.28
R3HDM4-208ENST00000626716 GCOM1H8Y6P7 765 aaPredicted RBP29.28■■■□□ 2.28
R3HDM4-208ENST00000626716 POLR2MP0CAP2 368 aa29.28■■■□□ 2.28
R3HDM4-208ENST00000626716 TGFB3P10600 412 aa29.28■■■□□ 2.28
R3HDM4-208ENST00000626716 HOXD8P13378 290 aaPredicted RBP29.28■■■□□ 2.28
R3HDM4-208ENST00000626716 PTK7Q13308 1070 aa29.28■■■□□ 2.28
R3HDM4-208ENST00000626716 SLC35G1Q2M3R5 365 aa29.28■■■□□ 2.28
R3HDM4-208ENST00000626716 IL27Q8NEV9 243 aa29.28■■■□□ 2.28
R3HDM4-208ENST00000626716 ADAMTS19Q8TE59 1207 aa29.28■■■□□ 2.28
R3HDM4-208ENST00000626716 SPATA33Q96N06 139 aa29.28■■■□□ 2.28
R3HDM4-208ENST00000626716 TLL1O43897 1013 aa29.27■■■□□ 2.28
R3HDM4-208ENST00000626716 CXCL10P02778 98 aa29.27■■■□□ 2.28
R3HDM4-208ENST00000626716 CHMLP26374 656 aa29.27■■■□□ 2.28
R3HDM4-208ENST00000626716 WDR5P61964 334 aaKnown RBP29.27■■■□□ 2.28
R3HDM4-208ENST00000626716 CNKSR3Q6P9H4 555 aa29.27■■■□□ 2.28
R3HDM4-208ENST00000626716 ARNTL2Q8WYA1 636 aa29.27■■■□□ 2.28
R3HDM4-208ENST00000626716 PNMA6FA0A0J9YX94 578 aa29.26■■■□□ 2.27
R3HDM4-208ENST00000626716 EPOPA6NHQ4 379 aa29.26■■■□□ 2.27
R3HDM4-208ENST00000626716 NBNO60934 754 aa29.26■■■□□ 2.27
R3HDM4-208ENST00000626716 ARHGEF15O94989 841 aa29.26■■■□□ 2.27
R3HDM4-208ENST00000626716 GGPS1O95749 300 aa29.26■■■□□ 2.27
R3HDM4-208ENST00000626716 CCND2P30279 289 aa29.26■■■□□ 2.27
R3HDM4-208ENST00000626716 SP2Q02086 613 aa29.26■■■□□ 2.27
R3HDM4-208ENST00000626716 HSDL1Q3SXM5 330 aa29.26■■■□□ 2.27
R3HDM4-208ENST00000626716 RALYLQ86SE5 291 aaKnown RBP29.26■■■□□ 2.27
R3HDM4-208ENST00000626716 IL31RAQ8NI17 732 aa29.26■■■□□ 2.27
R3HDM4-208ENST00000626716 SENP2Q9HC62 589 aa29.26■■■□□ 2.27
R3HDM4-208ENST00000626716 XIRP2A4UGR9 3374 aa29.26■■■□□ 2.27
R3HDM4-208ENST00000626716 PTPRSQ13332 1948 aa29.26■■■□□ 2.27
R3HDM4-208ENST00000626716 CYTH3O43739 400 aa29.25■■■□□ 2.27
R3HDM4-208ENST00000626716 SORBS3O60504 671 aa29.25■■■□□ 2.27
R3HDM4-208ENST00000626716 TROAPQ12815 778 aa29.25■■■□□ 2.27
R3HDM4-208ENST00000626716 WTAPQ15007 396 aa29.25■■■□□ 2.27
R3HDM4-208ENST00000626716 SART3Q15020 963 aaKnown RBP29.25■■■□□ 2.27
R3HDM4-208ENST00000626716 SKIV2LQ15477 1246 aaKnown RBP29.25■■■□□ 2.27
R3HDM4-208ENST00000626716 FCHSD1Q86WN1 690 aa29.25■■■□□ 2.27
R3HDM4-208ENST00000626716 NCOA7Q8NI08 942 aa29.25■■■□□ 2.27
R3HDM4-208ENST00000626716 ZBED2Q9BTP6 218 aa29.25■■■□□ 2.27
R3HDM4-208ENST00000626716 BDP1A6H8Y1 2624 aa29.25■■■□□ 2.27
R3HDM4-208ENST00000626716 TCF20Q9UGU0 1960 aaKnown RBP29.24■■■□□ 2.27
R3HDM4-208ENST00000626716 ABHD14A-ACY1A0A1B0GW23 586 aa29.24■■■□□ 2.27
R3HDM4-208ENST00000626716 E7EWF7 191 aa29.24■■■□□ 2.27
R3HDM4-208ENST00000626716 ZNF200P98182 395 aaPredicted RBP29.24■■■□□ 2.27
R3HDM4-208ENST00000626716 TRIM71Q2Q1W2 868 aaKnown RBP29.24■■■□□ 2.27
R3HDM4-208ENST00000626716 ZFP91Q96JP5 570 aaPredicted RBP29.24■■■□□ 2.27
R3HDM4-208ENST00000626716 UHRF1Q96T88 793 aaPredicted RBP29.24■■■□□ 2.27
R3HDM4-208ENST00000626716 MLXIPQ9HAP2 919 aa29.24■■■□□ 2.27
R3HDM4-208ENST00000626716 SUPT16HQ9Y5B9 1047 aaKnown RBP29.24■■■□□ 2.27
R3HDM4-208ENST00000626716 UBA1P22314 1058 aaKnown RBP29.23■■■□□ 2.27
R3HDM4-208ENST00000626716 AAK1Q2M2I8 961 aa29.23■■■□□ 2.27
R3HDM4-208ENST00000626716 ZNF618Q5T7W0 954 aa29.23■■■□□ 2.27
R3HDM4-208ENST00000626716 TAF6LQ9Y6J9 622 aa29.23■■■□□ 2.27
R3HDM4-208ENST00000626716 EFCAB14O75071 495 aa29.22■■■□□ 2.27
R3HDM4-208ENST00000626716 DEFB103AP81534 67 aa29.22■■■□□ 2.27
R3HDM4-208ENST00000626716 IKBKEQ14164 716 aa29.22■■■□□ 2.27
R3HDM4-208ENST00000626716 TRAF7Q6Q0C0 670 aa29.22■■■□□ 2.27
R3HDM4-208ENST00000626716 TMCO2Q7Z6W1 182 aaPredicted RBP29.22■■■□□ 2.27
R3HDM4-208ENST00000626716 CATIPQ7Z7H3 387 aa29.22■■■□□ 2.27
R3HDM4-208ENST00000626716 GPKOWQ92917 476 aaPredicted RBP eCLIP29.22■■■□□ 2.27
R3HDM4-208ENST00000626716 WNT8BQ93098 351 aa29.22■■■□□ 2.27
R3HDM4-208ENST00000626716 C16orf70Q9BSU1 422 aa29.22■■■□□ 2.27
R3HDM4-208ENST00000626716 BMP1P13497 986 aa29.21■■■□□ 2.27
R3HDM4-208ENST00000626716 TFF2Q03403 129 aa29.21■■■□□ 2.27
R3HDM4-208ENST00000626716 HIC1Q14526 733 aa29.21■■■□□ 2.27
R3HDM4-208ENST00000626716 TCTN1Q2MV58 587 aa29.21■■■□□ 2.27
R3HDM4-208ENST00000626716 KRT40Q6A162 431 aa29.21■■■□□ 2.27
R3HDM4-208ENST00000626716 IGDCC4Q8TDY8 1250 aa29.21■■■□□ 2.27
R3HDM4-208ENST00000626716 LCHNA4D1U4 455 aa29.2■■■□□ 2.26
R3HDM4-208ENST00000626716 SGSM2O43147 1006 aa29.2■■■□□ 2.26
R3HDM4-208ENST00000626716 GRB10Q13322 594 aa29.2■■■□□ 2.26
R3HDM4-208ENST00000626716 RAD9AQ99638 391 aa29.2■■■□□ 2.26
R3HDM4-208ENST00000626716 GJB5O95377 273 aa29.19■■■□□ 2.26
R3HDM4-208ENST00000626716 GNPTABQ3T906 1256 aa29.19■■■□□ 2.26
R3HDM4-208ENST00000626716 SERINC5Q86VE9 423 aa29.19■■■□□ 2.26
R3HDM4-208ENST00000626716 MAP4K1Q92918 833 aa29.19■■■□□ 2.26
R3HDM4-208ENST00000626716 H3BRB1 525 aa29.18■■■□□ 2.26
R3HDM4-208ENST00000626716 STAM2O75886 525 aa29.18■■■□□ 2.26
R3HDM4-208ENST00000626716 MRPS9P82933 396 aaKnown RBP29.18■■■□□ 2.26
R3HDM4-208ENST00000626716 MBTPS1Q14703 1052 aa29.18■■■□□ 2.26
R3HDM4-208ENST00000626716 SPRED2Q7Z698 418 aa29.18■■■□□ 2.26
R3HDM4-208ENST00000626716 PIBF1Q8WXW3 757 aa29.18■■■□□ 2.26
R3HDM4-208ENST00000626716 TUT1Q9H6E5 874 aaKnown RBP29.18■■■□□ 2.26
R3HDM4-208ENST00000626716 BCAS3Q9H6U6 928 aa29.18■■■□□ 2.26
R3HDM4-208ENST00000626716 COG5Q9UP83 839 aa29.18■■■□□ 2.26
R3HDM4-208ENST00000626716 EMSYQ7Z589 1322 aa29.18■■■□□ 2.26
R3HDM4-208ENST00000626716 C17orf102A2RUQ5 167 aa29.17■■■□□ 2.26
R3HDM4-208ENST00000626716 LPXNO60711 386 aa29.17■■■□□ 2.26
R3HDM4-208ENST00000626716 LGR5O75473 907 aa29.17■■■□□ 2.26
R3HDM4-208ENST00000626716 ICAM3P32942 547 aa29.17■■■□□ 2.26
R3HDM4-208ENST00000626716 THPOP40225 353 aa29.17■■■□□ 2.26
R3HDM4-208ENST00000626716 ANTXR2P58335 489 aa29.17■■■□□ 2.26
R3HDM4-208ENST00000626716 ATP6V0A1Q93050 837 aa29.17■■■□□ 2.26
R3HDM4-208ENST00000626716 INPP4AQ96PE3 977 aaPredicted RBP29.17■■■□□ 2.26
R3HDM4-208ENST00000626716 MAP3K14Q99558 947 aa29.17■■■□□ 2.26
R3HDM4-208ENST00000626716 FRMPD4Q14CM0 1322 aa29.17■■■□□ 2.26
R3HDM4-208ENST00000626716 RSPH10B2B2RC85 870 aa29.16■■■□□ 2.26
R3HDM4-208ENST00000626716 SPATA31C2B4DYI2 1134 aa29.16■■■□□ 2.26
R3HDM4-208ENST00000626716 NOP56O00567 594 aaKnown RBP29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms