RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 TMEM199Q8N511 208 aa25.66■■□□□ 1.7
SF1-220ENST00000626028 CDHR1Q96JP9 859 aa25.66■■□□□ 1.7
SF1-220ENST00000626028 SENP7Q9BQF6 1050 aa25.66■■□□□ 1.7
SF1-220ENST00000626028 RIC8AQ9NPQ8 531 aa25.66■■□□□ 1.7
SF1-220ENST00000626028 KAT6AQ92794 2004 aa25.65■■□□□ 1.7
SF1-220ENST00000626028 B4GALT4O60513 344 aa25.65■■□□□ 1.7
SF1-220ENST00000626028 UBA1P22314 1058 aaKnown RBP25.65■■□□□ 1.7
SF1-220ENST00000626028 ADD1P35611 737 aaKnown RBP25.65■■□□□ 1.7
SF1-220ENST00000626028 PFKFB3Q16875 520 aaPredicted RBP25.65■■□□□ 1.7
SF1-220ENST00000626028 NBPF20Q3BBV1 942 aa25.65■■□□□ 1.7
SF1-220ENST00000626028 NLRX1Q86UT6 975 aa25.65■■□□□ 1.7
SF1-220ENST00000626028 SESTD1Q86VW0 696 aa25.65■■□□□ 1.7
SF1-220ENST00000626028 GIMAP8Q8ND71 665 aaPredicted RBP25.65■■□□□ 1.7
SF1-220ENST00000626028 GPKOWQ92917 476 aaPredicted RBP eCLIP25.65■■□□□ 1.73e-7■■□□□ 13
SF1-220ENST00000626028 TRIP12Q14669 1992 aaPredicted RBP25.65■■□□□ 1.7
SF1-220ENST00000626028 STXBP3O00186 592 aa25.64■■□□□ 1.7
SF1-220ENST00000626028 MAFGO15525 162 aa25.64■■□□□ 1.7
SF1-220ENST00000626028 PPIGQ13427 754 aaKnown RBP eCLIP25.64■■□□□ 1.7
SF1-220ENST00000626028 MCTP2Q6DN12 878 aa25.64■■□□□ 1.7
SF1-220ENST00000626028 CCDC12Q8WUD4 166 aaPredicted RBP25.64■■□□□ 1.7
SF1-220ENST00000626028 ZNF274Q96GC6 653 aaPredicted RBP25.64■■□□□ 1.7
SF1-220ENST00000626028 HIPK3Q9H422 1215 aa25.64■■□□□ 1.7
SF1-220ENST00000626028 ESYT2A0FGR8 921 aa25.63■■□□□ 1.69
SF1-220ENST00000626028 PRPF3O43395 683 aaKnown RBP25.63■■□□□ 1.69
SF1-220ENST00000626028 GGPS1O95749 300 aa25.63■■□□□ 1.69
SF1-220ENST00000626028 SCG2P13521 617 aa25.63■■□□□ 1.69
SF1-220ENST00000626028 PDIA3P30101 505 aaKnown RBP25.63■■□□□ 1.69
SF1-220ENST00000626028 ADCY7P51828 1080 aa25.63■■□□□ 1.69
SF1-220ENST00000626028 GPRASP2Q96D09 838 aa25.63■■□□□ 1.69
SF1-220ENST00000626028 IL17RAQ96F46 866 aa25.63■■□□□ 1.69
SF1-220ENST00000626028 SPATA33Q96N06 139 aa25.63■■□□□ 1.69
SF1-220ENST00000626028 RNF26Q9BY78 433 aaPredicted RBP25.63■■□□□ 1.69
SF1-220ENST00000626028 MLXIPQ9HAP2 919 aa25.63■■□□□ 1.69
SF1-220ENST00000626028 PCDHA6Q9UN73 950 aa25.63■■□□□ 1.69
SF1-220ENST00000626028 PCDHA8Q9Y5H6 950 aa25.63■■□□□ 1.69
SF1-220ENST00000626028 TANC1Q9C0D5 1861 aa25.62■■□□□ 1.69
SF1-220ENST00000626028 F2P00734 622 aa25.62■■□□□ 1.69
SF1-220ENST00000626028 IFNAR1P17181 557 aa25.62■■□□□ 1.69
SF1-220ENST00000626028 SP2Q02086 613 aa25.62■■□□□ 1.69
SF1-220ENST00000626028 AP3B2Q13367 1082 aa25.62■■□□□ 1.69
SF1-220ENST00000626028 TOB2Q14106 344 aaPredicted RBP25.62■■□□□ 1.69
SF1-220ENST00000626028 METTL7BQ6UX53 244 aa25.62■■□□□ 1.69
SF1-220ENST00000626028 TRPV6Q9H1D0 765 aa25.62■■□□□ 1.69
SF1-220ENST00000626028 AKAP17AQ02040 695 aaKnown RBP25.61■■□□□ 1.69
SF1-220ENST00000626028 SHHQ15465 462 aa25.61■■□□□ 1.69
SF1-220ENST00000626028 NTRK3Q16288 839 aa25.61■■□□□ 1.69
SF1-220ENST00000626028 HSDL1Q3SXM5 330 aa25.61■■□□□ 1.69
SF1-220ENST00000626028 TYW1BQ6NUM6 668 aa25.61■■□□□ 1.69
SF1-220ENST00000626028 KAT2BQ92831 832 aa25.61■■□□□ 1.69
SF1-220ENST00000626028 NOC4LQ9BVI4 516 aaKnown RBP25.61■■□□□ 1.69
SF1-220ENST00000626028 RTEL1Q9NZ71 1219 aa25.61■■□□□ 1.69
SF1-220ENST00000626028 SMCO2A6NFE2 343 aa25.6■■□□□ 1.69
SF1-220ENST00000626028 UBE2SQ16763 222 aa25.6■■□□□ 1.69
SF1-220ENST00000626028 ZMYND12Q9H0C1 365 aa25.6■■□□□ 1.69
SF1-220ENST00000626028 HAS3O00219 553 aa25.59■■□□□ 1.69
SF1-220ENST00000626028 PITPNM1O00562 1244 aa25.59■■□□□ 1.69
SF1-220ENST00000626028 SOX1O00570 391 aaPredicted RBP25.59■■□□□ 1.69
SF1-220ENST00000626028 CLK2P49760 499 aaKnown RBP25.59■■□□□ 1.69
SF1-220ENST00000626028 SEMA3FQ13275 785 aa25.59■■□□□ 1.69
SF1-220ENST00000626028 FAM47CQ5HY64 1035 aa25.59■■□□□ 1.69
SF1-220ENST00000626028 FAM177A1Q8N128 213 aaPredicted RBP25.59■■□□□ 1.69
SF1-220ENST00000626028 PDRG1Q9NUG6 133 aa25.59■■□□□ 1.69
SF1-220ENST00000626028 TRMT13Q9NUP7 481 aaKnown RBP25.59■■□□□ 1.69
SF1-220ENST00000626028 PCDH10Q9P2E7 1040 aa25.59■■□□□ 1.69
SF1-220ENST00000626028 UBIAD1Q9Y5Z9 338 aa25.59■■□□□ 1.69
SF1-220ENST00000626028 NOP56O00567 594 aaKnown RBP25.58■■□□□ 1.69
SF1-220ENST00000626028 GNA11P29992 359 aa25.58■■□□□ 1.69
SF1-220ENST00000626028 UPF3BQ9BZI7 483 aaKnown RBP25.58■■□□□ 1.69
SF1-220ENST00000626028 PPP1R12CQ9BZL4 782 aa25.58■■□□□ 1.69
SF1-220ENST00000626028 CSF2RAP15509 400 aa25.57■■□□□ 1.68
SF1-220ENST00000626028 ITGB5P18084 799 aa25.57■■□□□ 1.68
SF1-220ENST00000626028 PSEN2P49810 448 aa25.57■■□□□ 1.68
SF1-220ENST00000626028 MTMR1Q13613 665 aa25.57■■□□□ 1.68
SF1-220ENST00000626028 MFSD10Q14728 455 aa25.57■■□□□ 1.68
SF1-220ENST00000626028 PKN1Q16512 942 aa25.57■■□□□ 1.68
SF1-220ENST00000626028 C9orf50Q5SZB4 431 aa25.57■■□□□ 1.68
SF1-220ENST00000626028 PSRC1Q6PGN9 363 aaPredicted RBP25.57■■□□□ 1.68
SF1-220ENST00000626028 CPLX2Q6PUV4 134 aaKnown RBP25.57■■□□□ 1.68
SF1-220ENST00000626028 TRIM22Q8IYM9 498 aa25.57■■□□□ 1.68
SF1-220ENST00000626028 C7orf31Q8N865 590 aa25.57■■□□□ 1.68
SF1-220ENST00000626028 CCDC148Q8NFR7 591 aa25.57■■□□□ 1.68
SF1-220ENST00000626028 ZFP91Q96JP5 570 aaPredicted RBP25.57■■□□□ 1.68
SF1-220ENST00000626028 C6orf50Q9HD87 102 aa25.57■■□□□ 1.68
SF1-220ENST00000626028 JADE2Q9NQC1 790 aa25.57■■□□□ 1.68
SF1-220ENST00000626028 SH3GLB2Q9NR46 395 aa25.57■■□□□ 1.68
SF1-220ENST00000626028 GTF2IRD1Q9UHL9 959 aa25.57■■□□□ 1.68
SF1-220ENST00000626028 PFKMP08237 780 aa25.56■■□□□ 1.68
SF1-220ENST00000626028 CYP2C18P33260 490 aa25.56■■□□□ 1.68
SF1-220ENST00000626028 SREBF1P36956 1147 aa25.56■■□□□ 1.68
SF1-220ENST00000626028 EPHB4P54760 987 aa25.56■■□□□ 1.68
SF1-220ENST00000626028 BFSP2Q13515 415 aa25.56■■□□□ 1.68
SF1-220ENST00000626028 ANKRD1Q15327 319 aa25.56■■□□□ 1.68
SF1-220ENST00000626028 KIAA0753Q2KHM9 967 aa25.56■■□□□ 1.68
SF1-220ENST00000626028 CYFIP1Q7L576 1253 aa25.56■■□□□ 1.68
SF1-220ENST00000626028 RPUSD2Q8IZ73 545 aaKnown RBP25.56■■□□□ 1.68
SF1-220ENST00000626028 CCDC155Q8N6L0 562 aa25.56■■□□□ 1.68
SF1-220ENST00000626028 BICD2Q8TD16 824 aa25.56■■□□□ 1.68
SF1-220ENST00000626028 LRCH3Q96II8 777 aa25.56■■□□□ 1.68
SF1-220ENST00000626028 RNPC3Q96LT9 517 aaKnown RBP25.56■■□□□ 1.68
SF1-220ENST00000626028 C16orf70Q9BSU1 422 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms