RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 OTOP2Q7RTS6 562 aa12.48□□□□□ -0.41
SSBP4-215ENST00000625926 C7orf31Q8N865 590 aa12.48□□□□□ -0.41
SSBP4-215ENST00000625926 SCLYQ96I15 445 aa12.48□□□□□ -0.41
SSBP4-215ENST00000625926 TCEANC2Q96MN5 208 aa12.48□□□□□ -0.41
SSBP4-215ENST00000625926 INPP4AQ96PE3 977 aaPredicted RBP12.48□□□□□ -0.41
SSBP4-215ENST00000625926 RTEL1Q9NZ71 1219 aa12.48□□□□□ -0.41
SSBP4-215ENST00000625926 BRPF3Q9ULD4 1205 aa12.48□□□□□ -0.41
SSBP4-215ENST00000625926 SMCHD1A6NHR9 2005 aa12.48□□□□□ -0.41
SSBP4-215ENST00000625926 MUC3AQ02505 3323 aa12.47□□□□□ -0.41
SSBP4-215ENST00000625926 hCG_1642624A0A1W2PR95 340 aa12.47□□□□□ -0.41
SSBP4-215ENST00000625926 ZBTB43O43298 467 aa12.47□□□□□ -0.41
SSBP4-215ENST00000625926 FIBPO43427 364 aa12.47□□□□□ -0.41
SSBP4-215ENST00000625926 F2P00734 622 aa12.47□□□□□ -0.41
SSBP4-215ENST00000625926 PFKMP08237 780 aa12.47□□□□□ -0.41
SSBP4-215ENST00000625926 IQCF3P0C7M6 154 aa12.47□□□□□ -0.41
SSBP4-215ENST00000625926 HOXD8P13378 290 aaPredicted RBP12.47□□□□□ -0.41
SSBP4-215ENST00000625926 HSPA4P34932 840 aa12.47□□□□□ -0.41
SSBP4-215ENST00000625926 RFC2P35250 354 aa12.47□□□□□ -0.41
SSBP4-215ENST00000625926 FGD1P98174 961 aa12.47□□□□□ -0.41
SSBP4-215ENST00000625926 NEDD9Q14511 834 aa12.47□□□□□ -0.41
SSBP4-215ENST00000625926 MFSD10Q14728 455 aa12.47□□□□□ -0.41
SSBP4-215ENST00000625926 RTN1Q16799 776 aa12.47□□□□□ -0.41
SSBP4-215ENST00000625926 HSDL1Q3SXM5 330 aa12.47□□□□□ -0.41
SSBP4-215ENST00000625926 PCNX4Q63HM2 1172 aa12.47□□□□□ -0.41
SSBP4-215ENST00000625926 NLRX1Q86UT6 975 aa12.47□□□□□ -0.41
SSBP4-215ENST00000625926 CCDC155Q8N6L0 562 aa12.47□□□□□ -0.41
SSBP4-215ENST00000625926 GPKOWQ92917 476 aaPredicted RBP eCLIP12.47□□□□□ -0.41
SSBP4-215ENST00000625926 KCNB2Q92953 911 aa12.47□□□□□ -0.41
SSBP4-215ENST00000625926 CDX2Q99626 313 aaPredicted RBP12.47□□□□□ -0.41
SSBP4-215ENST00000625926 ALG1Q9BT22 464 aa12.47□□□□□ -0.41
SSBP4-215ENST00000625926 TTYH1Q9H313 450 aaPredicted RBP12.47□□□□□ -0.41
SSBP4-215ENST00000625926 HDAC6Q9UBN7 1215 aa12.47□□□□□ -0.41
SSBP4-215ENST00000625926 KLF18A0A0U1RQI7 1052 aa12.46□□□□□ -0.41
SSBP4-215ENST00000625926 GRXCR1A8MXD5 290 aa12.46□□□□□ -0.41
SSBP4-215ENST00000625926 HAS3O00219 553 aa12.46□□□□□ -0.41
SSBP4-215ENST00000625926 REC8O95072 547 aa12.46□□□□□ -0.41
SSBP4-215ENST00000625926 ZNF286BP0CG31 522 aa12.46□□□□□ -0.41
SSBP4-215ENST00000625926 DNAJB2P25686 324 aa12.46□□□□□ -0.41
SSBP4-215ENST00000625926 KIAA0753Q2KHM9 967 aa12.46□□□□□ -0.41
SSBP4-215ENST00000625926 GDF6Q6KF10 455 aaPredicted RBP12.46□□□□□ -0.41
SSBP4-215ENST00000625926 HEATR3Q7Z4Q2 680 aa12.46□□□□□ -0.41
SSBP4-215ENST00000625926 DEFB128Q7Z7B8 93 aa12.46□□□□□ -0.41
SSBP4-215ENST00000625926 CAGE1Q8TC20 777 aa12.46□□□□□ -0.41
SSBP4-215ENST00000625926 TIFAQ96CG3 184 aa12.46□□□□□ -0.41
SSBP4-215ENST00000625926 PBX4Q9BYU1 374 aa12.46□□□□□ -0.41
SSBP4-215ENST00000625926 CXXC1Q9P0U4 656 aaPredicted RBP12.46□□□□□ -0.41
SSBP4-215ENST00000625926 GTF2IRD1Q9UHL9 959 aa12.46□□□□□ -0.41
SSBP4-215ENST00000625926 SLC4A7Q9Y6M7 1214 aa12.46□□□□□ -0.41
SSBP4-215ENST00000625926 LRRC37A2A6NM11 1700 aa12.45□□□□□ -0.42
SSBP4-215ENST00000625926 SPDYE3A6NKU9 549 aa12.45□□□□□ -0.42
SSBP4-215ENST00000625926 GOLGA8AA7E2F4 631 aa12.45□□□□□ -0.42
SSBP4-215ENST00000625926 GOLGA8BA8MQT2 603 aa12.45□□□□□ -0.42
SSBP4-215ENST00000625926 NOP56O00567 594 aaKnown RBP12.45□□□□□ -0.42
SSBP4-215ENST00000625926 ACTN1P12814 892 aa12.45□□□□□ -0.42
SSBP4-215ENST00000625926 RCAN1P53805 252 aa12.45□□□□□ -0.42
SSBP4-215ENST00000625926 METTL7BQ6UX53 244 aa12.45□□□□□ -0.42
SSBP4-215ENST00000625926 CYFIP1Q7L576 1253 aa12.45□□□□□ -0.42
SSBP4-215ENST00000625926 TEX2Q8IWB9 1127 aa12.45□□□□□ -0.42
SSBP4-215ENST00000625926 VWCEQ96DN2 955 aa12.45□□□□□ -0.42
SSBP4-215ENST00000625926 JAKMIP1Q96N16 626 aaKnown RBP12.45□□□□□ -0.42
SSBP4-215ENST00000625926 SENP7Q9BQF6 1050 aa12.45□□□□□ -0.42
SSBP4-215ENST00000625926 C16orf70Q9BSU1 422 aa12.45□□□□□ -0.42
SSBP4-215ENST00000625926 USP26Q9BXU7 913 aa12.45□□□□□ -0.42
SSBP4-215ENST00000625926 ZNF576Q9H609 170 aa12.45□□□□□ -0.42
SSBP4-215ENST00000625926 BCAS3Q9H6U6 928 aa12.45□□□□□ -0.42
SSBP4-215ENST00000625926 MSRAQ9UJ68 235 aa12.45□□□□□ -0.42
SSBP4-215ENST00000625926 NAP1L2Q9ULW6 460 aaPredicted RBP12.45□□□□□ -0.42
SSBP4-215ENST00000625926 SNX14Q9Y5W7 946 aa12.45□□□□□ -0.42
SSBP4-215ENST00000625926 V9GY48 417 aaPredicted RBP12.45□□□□□ -0.42
SSBP4-215ENST00000625926 LTBP2Q14767 1821 aa12.45□□□□□ -0.42
SSBP4-215ENST00000625926 EYSQ5T1H1 3165 aa12.45□□□□□ -0.42
SSBP4-215ENST00000625926 CCDC196A0A1B0GTZ2 297 aa12.44□□□□□ -0.42
SSBP4-215ENST00000625926 ZBBXA8MT70 800 aa12.44□□□□□ -0.42
SSBP4-215ENST00000625926 H3BRB1 525 aa12.44□□□□□ -0.42
SSBP4-215ENST00000625926 hCG_1984214I3L0E3 225 aa12.44□□□□□ -0.42
SSBP4-215ENST00000625926 CPA1P15085 419 aa12.44□□□□□ -0.42
SSBP4-215ENST00000625926 PSMA5P28066 241 aa12.44□□□□□ -0.42
SSBP4-215ENST00000625926 PBX2P40425 430 aa12.44□□□□□ -0.42
SSBP4-215ENST00000625926 NAPAP54920 295 aa12.44□□□□□ -0.42
SSBP4-215ENST00000625926 FUT2Q10981 343 aa12.44□□□□□ -0.42
SSBP4-215ENST00000625926 SEMA3FQ13275 785 aa12.44□□□□□ -0.42
SSBP4-215ENST00000625926 PTK7Q13308 1070 aa12.44□□□□□ -0.42
SSBP4-215ENST00000625926 RAB30Q15771 203 aa12.44□□□□□ -0.42
SSBP4-215ENST00000625926 UBE2SQ16763 222 aa12.44□□□□□ -0.42
SSBP4-215ENST00000625926 WWC2Q6AWC2 1192 aa12.44□□□□□ -0.42
SSBP4-215ENST00000625926 BLOC1S2Q6QNY1 142 aa12.44□□□□□ -0.42
SSBP4-215ENST00000625926 Q6ZUG5 572 aa12.44□□□□□ -0.42
SSBP4-215ENST00000625926 ZNF713Q8N859 430 aaPredicted RBP12.44□□□□□ -0.42
SSBP4-215ENST00000625926 GIMAP8Q8ND71 665 aaPredicted RBP12.44□□□□□ -0.42
SSBP4-215ENST00000625926 AFAP1L1Q8TED9 768 aa12.44□□□□□ -0.42
SSBP4-215ENST00000625926 GPRASP2Q96D09 838 aa12.44□□□□□ -0.42
SSBP4-215ENST00000625926 CDHR1Q96JP9 859 aa12.44□□□□□ -0.42
SSBP4-215ENST00000625926 CTAGE1Q96RT6 745 aa12.44□□□□□ -0.42
SSBP4-215ENST00000625926 FTOQ9C0B1 505 aaKnown RBP eCLIP12.44□□□□□ -0.42
SSBP4-215ENST00000625926 TUT1Q9H6E5 874 aaKnown RBP12.44□□□□□ -0.42
SSBP4-215ENST00000625926 EHMT1Q9H9B1 1298 aa12.44□□□□□ -0.42
SSBP4-215ENST00000625926 PCDHA6Q9UN73 950 aa12.44□□□□□ -0.42
SSBP4-215ENST00000625926 PCDHA8Q9Y5H6 950 aa12.44□□□□□ -0.42
SSBP4-215ENST00000625926 CNTNAP5Q8WYK1 1306 aa12.43□□□□□ -0.42
SSBP4-215ENST00000625926 LCTP09848 1927 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms