RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 SAMD3Q8N6K7 520 aa16.8■□□□□ 0.28
TUBB3-215ENST00000625617 IL31RAQ8NI17 732 aa16.8■□□□□ 0.28
TUBB3-215ENST00000625617 YTHDC1Q96MU7 727 aaKnown RBP16.8■□□□□ 0.28
TUBB3-215ENST00000625617 NECAB3Q96P71 396 aaPredicted RBP16.8■□□□□ 0.28
TUBB3-215ENST00000625617 ABHD14A-ACY1A0A1B0GW23 586 aa16.79■□□□□ 0.28
TUBB3-215ENST00000625617 PALM3A6NDB9 673 aaPredicted RBP16.79■□□□□ 0.28
TUBB3-215ENST00000625617 GCOM1H8Y6P7 765 aaPredicted RBP16.79■□□□□ 0.28
TUBB3-215ENST00000625617 SORBS3O60504 671 aa16.79■□□□□ 0.28
TUBB3-215ENST00000625617 RGS20O76081 388 aa16.79■□□□□ 0.28
TUBB3-215ENST00000625617 POLR2MP0CAP2 368 aa16.79■□□□□ 0.28
TUBB3-215ENST00000625617 BMP1P13497 986 aa16.79■□□□□ 0.28
TUBB3-215ENST00000625617 UBA1P22314 1058 aaKnown RBP16.79■□□□□ 0.28
TUBB3-215ENST00000625617 CCND2P30279 289 aa16.79■□□□□ 0.28
TUBB3-215ENST00000625617 GRM4Q14833 912 aa16.79■□□□□ 0.28
TUBB3-215ENST00000625617 CELF3Q5SZQ8 465 aaKnown RBP16.79■□□□□ 0.28
TUBB3-215ENST00000625617 MYSM1Q5VVJ2 828 aa16.79■□□□□ 0.28
TUBB3-215ENST00000625617 SPRED2Q7Z698 418 aa16.79■□□□□ 0.28
TUBB3-215ENST00000625617 COG5Q9UP83 839 aa16.79■□□□□ 0.28
TUBB3-215ENST00000625617 ERICH2A1L162 156 aa16.78■□□□□ 0.28
TUBB3-215ENST00000625617 PPFIA4O75335 1185 aa16.78■□□□□ 0.28
TUBB3-215ENST00000625617 GJB5O95377 273 aa16.78■□□□□ 0.28
TUBB3-215ENST00000625617 TRIM71Q2Q1W2 868 aaKnown RBP16.78■□□□□ 0.28
TUBB3-215ENST00000625617 HSDL1Q3SXM5 330 aa16.78■□□□□ 0.28
TUBB3-215ENST00000625617 ZNF618Q5T7W0 954 aa16.78■□□□□ 0.28
TUBB3-215ENST00000625617 RALYLQ86SE5 291 aaKnown RBP16.78■□□□□ 0.28
TUBB3-215ENST00000625617 VSIG10LQ86VR7 867 aa16.78■□□□□ 0.28
TUBB3-215ENST00000625617 GDPD5Q8WTR4 605 aa16.78■□□□□ 0.28
TUBB3-215ENST00000625617 WNT8BQ93098 351 aa16.78■□□□□ 0.28
TUBB3-215ENST00000625617 PIGSQ96S52 555 aa16.78■□□□□ 0.28
TUBB3-215ENST00000625617 U3KPZ7 1027 aaPredicted RBP16.78■□□□□ 0.28
TUBB3-215ENST00000625617 EMSYQ7Z589 1322 aa16.77■□□□□ 0.28
TUBB3-215ENST00000625617 IFIT3O14879 490 aaKnown RBP16.77■□□□□ 0.28
TUBB3-215ENST00000625617 LPXNO60711 386 aa16.77■□□□□ 0.28
TUBB3-215ENST00000625617 TGFB3P10600 412 aa16.77■□□□□ 0.28
TUBB3-215ENST00000625617 GSPT1P15170 499 aaKnown RBP16.77■□□□□ 0.28
TUBB3-215ENST00000625617 ZNF200P98182 395 aaPredicted RBP16.77■□□□□ 0.28
TUBB3-215ENST00000625617 IKBKEQ14164 716 aa16.77■□□□□ 0.28
TUBB3-215ENST00000625617 SART3Q15020 963 aaKnown RBP16.77■□□□□ 0.28
TUBB3-215ENST00000625617 SLC35G1Q2M3R5 365 aa16.77■□□□□ 0.28
TUBB3-215ENST00000625617 TCTN1Q2MV58 587 aa16.77■□□□□ 0.28
TUBB3-215ENST00000625617 TTC22Q5TAA0 569 aa16.77■□□□□ 0.28
TUBB3-215ENST00000625617 TRAF7Q6Q0C0 670 aa16.77■□□□□ 0.28
TUBB3-215ENST00000625617 FCHSD1Q86WN1 690 aa16.77■□□□□ 0.28
TUBB3-215ENST00000625617 RUFY2Q8WXA3 655 aa16.77■□□□□ 0.28
TUBB3-215ENST00000625617 RAD9AQ99638 391 aa16.77■□□□□ 0.28
TUBB3-215ENST00000625617 RIOX1Q9H6W3 641 aa16.77■□□□□ 0.28
TUBB3-215ENST00000625617 MLXIPQ9HAP2 919 aa16.77■□□□□ 0.28
TUBB3-215ENST00000625617 MTUS1Q9ULD2 1270 aa16.77■□□□□ 0.28
TUBB3-215ENST00000625617 PRRC2BQ5JSZ5 2229 aaKnown RBP16.76■□□□□ 0.27
TUBB3-215ENST00000625617 LGR5O75473 907 aa16.76■□□□□ 0.27
TUBB3-215ENST00000625617 MBTPS1Q14703 1052 aa16.76■□□□□ 0.27
TUBB3-215ENST00000625617 GNPTABQ3T906 1256 aa16.76■□□□□ 0.27
TUBB3-215ENST00000625617 SERINC5Q86VE9 423 aa16.76■□□□□ 0.27
TUBB3-215ENST00000625617 HLA-CQ95604 372 aa16.76■□□□□ 0.27
TUBB3-215ENST00000625617 TGS1Q96RS0 853 aaKnown RBP16.76■□□□□ 0.27
TUBB3-215ENST00000625617 C16orf70Q9BSU1 422 aa16.76■□□□□ 0.27
TUBB3-215ENST00000625617 COL4A4P53420 1690 aaPredicted RBP16.75■□□□□ 0.27
TUBB3-215ENST00000625617 TET1Q8NFU7 2136 aa16.75■□□□□ 0.27
TUBB3-215ENST00000625617 PNMA6FA0A0J9YX94 578 aa16.75■□□□□ 0.27
TUBB3-215ENST00000625617 C17orf102A2RUQ5 167 aa16.75■□□□□ 0.27
TUBB3-215ENST00000625617 NOP56O00567 594 aaKnown RBP16.75■□□□□ 0.27
TUBB3-215ENST00000625617 CYTH3O43739 400 aa16.75■□□□□ 0.27
TUBB3-215ENST00000625617 CYP21A2P08686 494 aa16.75■□□□□ 0.27
TUBB3-215ENST00000625617 PDE4AP27815 886 aa16.75■□□□□ 0.27
TUBB3-215ENST00000625617 THPOP40225 353 aa16.75■□□□□ 0.27
TUBB3-215ENST00000625617 SP2Q02086 613 aa16.75■□□□□ 0.27
TUBB3-215ENST00000625617 HIC1Q14526 733 aa16.75■□□□□ 0.27
TUBB3-215ENST00000625617 WTAPQ15007 396 aa16.75■□□□□ 0.27
TUBB3-215ENST00000625617 FAM117BQ6P1L5 589 aa16.75■□□□□ 0.27
TUBB3-215ENST00000625617 GPKOWQ92917 476 aaPredicted RBP eCLIP16.75■□□□□ 0.27
TUBB3-215ENST00000625617 ZFP91Q96JP5 570 aaPredicted RBP16.75■□□□□ 0.27
TUBB3-215ENST00000625617 KIAA1217Q5T5P2 1943 aa16.74■□□□□ 0.27
TUBB3-215ENST00000625617 FRMPD4Q14CM0 1322 aa16.74■□□□□ 0.27
TUBB3-215ENST00000625617 LINC01553A4QN01 128 aa16.74■□□□□ 0.27
TUBB3-215ENST00000625617 RSPH10B2B2RC85 870 aa16.74■□□□□ 0.27
TUBB3-215ENST00000625617 H3BRB1 525 aa16.74■□□□□ 0.27
TUBB3-215ENST00000625617 LGALS2P05162 132 aa16.74■□□□□ 0.27
TUBB3-215ENST00000625617 RSPH10BP0C881 870 aa16.74■□□□□ 0.27
TUBB3-215ENST00000625617 ERVK-21P61565 698 aa16.74■□□□□ 0.27
TUBB3-215ENST00000625617 PTH1RQ03431 593 aa16.74■□□□□ 0.27
TUBB3-215ENST00000625617 TROAPQ12815 778 aa16.74■□□□□ 0.27
TUBB3-215ENST00000625617 CATIPQ7Z7H3 387 aa16.74■□□□□ 0.27
TUBB3-215ENST00000625617 NCOA7Q8NI08 942 aa16.74■□□□□ 0.27
TUBB3-215ENST00000625617 ATP6V0A1Q93050 837 aa16.74■□□□□ 0.27
TUBB3-215ENST00000625617 TUT1Q9H6E5 874 aaKnown RBP16.74■□□□□ 0.27
TUBB3-215ENST00000625617 SENP2Q9HC62 589 aa16.74■□□□□ 0.27
TUBB3-215ENST00000625617 LMCD1Q9NZU5 365 aa16.74■□□□□ 0.27
TUBB3-215ENST00000625617 STAM2O75886 525 aa16.73■□□□□ 0.27
TUBB3-215ENST00000625617 AMHP03971 560 aa16.73■□□□□ 0.27
TUBB3-215ENST00000625617 SMIM10L2AP0DMW4 78 aa16.73■□□□□ 0.27
TUBB3-215ENST00000625617 SMIM10L2BP0DMW5 78 aa16.73■□□□□ 0.27
TUBB3-215ENST00000625617 HOXC8P31273 242 aa16.73■□□□□ 0.27
TUBB3-215ENST00000625617 METTL7BQ6UX53 244 aa16.73■□□□□ 0.27
TUBB3-215ENST00000625617 MYOCDQ8IZQ8 938 aa16.73■□□□□ 0.27
TUBB3-215ENST00000625617 DBF4BQ8NFT6 615 aa16.73■□□□□ 0.27
TUBB3-215ENST00000625617 PIBF1Q8WXW3 757 aa16.73■□□□□ 0.27
TUBB3-215ENST00000625617 INPP4AQ96PE3 977 aaPredicted RBP16.73■□□□□ 0.27
TUBB3-215ENST00000625617 C1QTNF1Q9BXJ1 281 aa16.73■□□□□ 0.27
TUBB3-215ENST00000625617 SUGCTQ9HAC7 445 aa16.73■□□□□ 0.27
TUBB3-215ENST00000625617 E7EWF7 191 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms