RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 MCTP2Q6DN12 878 aa14.29□□□□□ -0.12
LINC00963-217ENST00000624009 HEATR3Q7Z4Q2 680 aa14.29□□□□□ -0.12
LINC00963-217ENST00000624009 DHX37Q8IY37 1157 aaKnown RBP14.29□□□□□ -0.12
LINC00963-217ENST00000624009 CCDC82Q8N4S0 544 aa14.29□□□□□ -0.12
LINC00963-217ENST00000624009 GIMAP8Q8ND71 665 aaPredicted RBP14.29□□□□□ -0.12
LINC00963-217ENST00000624009 CCDC12Q8WUD4 166 aaPredicted RBP14.29□□□□□ -0.12
LINC00963-217ENST00000624009 AFG1LQ8WV93 481 aa14.29□□□□□ -0.12
LINC00963-217ENST00000624009 GPRASP2Q96D09 838 aa14.29□□□□□ -0.12
LINC00963-217ENST00000624009 RIC8AQ9NPQ8 531 aa14.29□□□□□ -0.12
LINC00963-217ENST00000624009 V9GY48 417 aaPredicted RBP14.29□□□□□ -0.12
LINC00963-217ENST00000624009 PRPF3O43395 683 aaKnown RBP14.28□□□□□ -0.12
LINC00963-217ENST00000624009 F2P00734 622 aa14.28□□□□□ -0.12
LINC00963-217ENST00000624009 UBA1P22314 1058 aaKnown RBP14.28□□□□□ -0.12
LINC00963-217ENST00000624009 APOBRQ0VD83 1088 aa14.28□□□□□ -0.12
LINC00963-217ENST00000624009 AP3B2Q13367 1082 aa14.28□□□□□ -0.12
LINC00963-217ENST00000624009 METTL7BQ6UX53 244 aa14.28□□□□□ -0.12
LINC00963-217ENST00000624009 NLRX1Q86UT6 975 aa14.28□□□□□ -0.12
LINC00963-217ENST00000624009 RAB11FIP4Q86YS3 637 aa14.28□□□□□ -0.12
LINC00963-217ENST00000624009 TMEM199Q8N511 208 aa14.28□□□□□ -0.12
LINC00963-217ENST00000624009 ZNF274Q96GC6 653 aaPredicted RBP14.28□□□□□ -0.12
LINC00963-217ENST00000624009 RNF26Q9BY78 433 aaPredicted RBP14.28□□□□□ -0.12
LINC00963-217ENST00000624009 TANC1Q9C0D5 1861 aa14.28□□□□□ -0.12
LINC00963-217ENST00000624009 COL6A3P12111 3177 aa14.28□□□□□ -0.12
LINC00963-217ENST00000624009 TET1Q8NFU7 2136 aa14.27□□□□□ -0.12
LINC00963-217ENST00000624009 STXBP3O00186 592 aa14.27□□□□□ -0.13
LINC00963-217ENST00000624009 PITPNM1O00562 1244 aa14.27□□□□□ -0.13
LINC00963-217ENST00000624009 B4GALT4O60513 344 aa14.27□□□□□ -0.13
LINC00963-217ENST00000624009 GGPS1O95749 300 aa14.27□□□□□ -0.13
LINC00963-217ENST00000624009 SCG2P13521 617 aa14.27□□□□□ -0.13
LINC00963-217ENST00000624009 CPA1P15085 419 aa14.27□□□□□ -0.13
LINC00963-217ENST00000624009 IFNAR1P17181 557 aa14.27□□□□□ -0.13
LINC00963-217ENST00000624009 ADD1P35611 737 aaKnown RBP14.27□□□□□ -0.13
LINC00963-217ENST00000624009 ADCY7P51828 1080 aa14.27□□□□□ -0.13
LINC00963-217ENST00000624009 NAPAP54920 295 aa14.27□□□□□ -0.13
LINC00963-217ENST00000624009 PSMC6P62333 389 aa14.27□□□□□ -0.13
LINC00963-217ENST00000624009 NTRK3Q16288 839 aa14.27□□□□□ -0.13
LINC00963-217ENST00000624009 NBPF20Q3BBV1 942 aa14.27□□□□□ -0.13
LINC00963-217ENST00000624009 KAT2BQ92831 832 aa14.27□□□□□ -0.13
LINC00963-217ENST00000624009 GPKOWQ92917 476 aaPredicted RBP eCLIP14.27□□□□□ -0.13
LINC00963-217ENST00000624009 SPATA33Q96N06 139 aa14.27□□□□□ -0.13
LINC00963-217ENST00000624009 NOC4LQ9BVI4 516 aaKnown RBP14.27□□□□□ -0.13
LINC00963-217ENST00000624009 HIPK3Q9H422 1215 aa14.27□□□□□ -0.13
LINC00963-217ENST00000624009 MYH9P35579 1960 aaKnown RBP14.26□□□□□ -0.13
LINC00963-217ENST00000624009 HAS3O00219 553 aa14.26□□□□□ -0.13
LINC00963-217ENST00000624009 PDIA3P30101 505 aaKnown RBP14.26□□□□□ -0.13
LINC00963-217ENST00000624009 SP2Q02086 613 aa14.26□□□□□ -0.13
LINC00963-217ENST00000624009 TOB2Q14106 344 aaPredicted RBP14.26□□□□□ -0.13
LINC00963-217ENST00000624009 FAM109BQ6ICB4 259 aaPredicted RBP14.26□□□□□ -0.13
LINC00963-217ENST00000624009 TYW1BQ6NUM6 668 aa14.26□□□□□ -0.13
LINC00963-217ENST00000624009 ZMYND12Q9H0C1 365 aa14.26□□□□□ -0.13
LINC00963-217ENST00000624009 MLXIPQ9HAP2 919 aa14.26□□□□□ -0.13
LINC00963-217ENST00000624009 SH3GLB2Q9NR46 395 aa14.26□□□□□ -0.13
LINC00963-217ENST00000624009 PCDHA6Q9UN73 950 aa14.26□□□□□ -0.13
LINC00963-217ENST00000624009 PCDHA8Q9Y5H6 950 aa14.26□□□□□ -0.13
LINC00963-217ENST00000624009 CDH23Q9H251 3354 aa14.25□□□□□ -0.13
LINC00963-217ENST00000624009 WDR81Q562E7 1941 aa14.25□□□□□ -0.13
LINC00963-217ENST00000624009 hCG_1642624A0A1W2PR95 340 aa14.25□□□□□ -0.13
LINC00963-217ENST00000624009 PFKMP08237 780 aa14.25□□□□□ -0.13
LINC00963-217ENST00000624009 GNA11P29992 359 aa14.25□□□□□ -0.13
LINC00963-217ENST00000624009 CLK2P49760 499 aaKnown RBP14.25□□□□□ -0.13
LINC00963-217ENST00000624009 AKAP17AQ02040 695 aaKnown RBP14.25□□□□□ -0.13
LINC00963-217ENST00000624009 RBL2Q08999 1139 aa14.25□□□□□ -0.13
LINC00963-217ENST00000624009 SEMA3FQ13275 785 aa14.25□□□□□ -0.13
LINC00963-217ENST00000624009 SHHQ15465 462 aa14.25□□□□□ -0.13
LINC00963-217ENST00000624009 HSDL1Q3SXM5 330 aa14.25□□□□□ -0.13
LINC00963-217ENST00000624009 PSRC1Q6PGN9 363 aaPredicted RBP14.25□□□□□ -0.13
LINC00963-217ENST00000624009 CAGE1Q8TC20 777 aa14.25□□□□□ -0.13
LINC00963-217ENST00000624009 TRPV6Q9H1D0 765 aa14.25□□□□□ -0.13
LINC00963-217ENST00000624009 PCDH10Q9P2E7 1040 aa14.25□□□□□ -0.13
LINC00963-217ENST00000624009 NAP1L2Q9ULW6 460 aaPredicted RBP14.25□□□□□ -0.13
LINC00963-217ENST00000624009 UBIAD1Q9Y5Z9 338 aa14.25□□□□□ -0.13
LINC00963-217ENST00000624009 SCN5AQ14524 2016 aa14.24□□□□□ -0.13
LINC00963-217ENST00000624009 CHD9Q3L8U1 2897 aa14.24□□□□□ -0.13
LINC00963-217ENST00000624009 SMCO2A6NFE2 343 aa14.24□□□□□ -0.13
LINC00963-217ENST00000624009 SOX1O00570 391 aaPredicted RBP14.24□□□□□ -0.13
LINC00963-217ENST00000624009 PARNO95453 639 aaKnown RBP14.24□□□□□ -0.13
LINC00963-217ENST00000624009 ITGB5P18084 799 aa14.24□□□□□ -0.13
LINC00963-217ENST00000624009 RFC2P35250 354 aa14.24□□□□□ -0.13
LINC00963-217ENST00000624009 SREBF1P36956 1147 aa14.24□□□□□ -0.13
LINC00963-217ENST00000624009 SMAD3P84022 425 aaKnown RBP14.24□□□□□ -0.13
LINC00963-217ENST00000624009 BFSP2Q13515 415 aa14.24□□□□□ -0.13
LINC00963-217ENST00000624009 ANKRD1Q15327 319 aa14.24□□□□□ -0.13
LINC00963-217ENST00000624009 PKN1Q16512 942 aa14.24□□□□□ -0.13
LINC00963-217ENST00000624009 RASIP1Q5U651 963 aa14.24□□□□□ -0.13
LINC00963-217ENST00000624009 CPLX2Q6PUV4 134 aaKnown RBP14.24□□□□□ -0.13
LINC00963-217ENST00000624009 NIPA1Q7RTP0 329 aa14.24□□□□□ -0.13
LINC00963-217ENST00000624009 RPUSD2Q8IZ73 545 aaKnown RBP14.24□□□□□ -0.13
LINC00963-217ENST00000624009 CCDC155Q8N6L0 562 aa14.24□□□□□ -0.13
LINC00963-217ENST00000624009 CCDC148Q8NFR7 591 aa14.24□□□□□ -0.13
LINC00963-217ENST00000624009 BICD2Q8TD16 824 aa14.24□□□□□ -0.13
LINC00963-217ENST00000624009 C16orf70Q9BSU1 422 aa14.24□□□□□ -0.13
LINC00963-217ENST00000624009 C6orf50Q9HD87 102 aa14.24□□□□□ -0.13
LINC00963-217ENST00000624009 IL23AQ9NPF7 189 aa14.24□□□□□ -0.13
LINC00963-217ENST00000624009 JADE2Q9NQC1 790 aa14.24□□□□□ -0.13
LINC00963-217ENST00000624009 TRMT13Q9NUP7 481 aaKnown RBP14.24□□□□□ -0.13
LINC00963-217ENST00000624009 GTF2IRD1Q9UHL9 959 aa14.24□□□□□ -0.13
LINC00963-217ENST00000624009 TMEM265A0A087WTH1 108 aa14.23□□□□□ -0.13
LINC00963-217ENST00000624009 NOP56O00567 594 aaKnown RBP14.23□□□□□ -0.13
LINC00963-217ENST00000624009 HOXC8P31273 242 aa14.23□□□□□ -0.13
LINC00963-217ENST00000624009 PSEN2P49810 448 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms