RNA–Protein interactions for RNA: ENST00000623391.1

AP000542.3-201, humanhuman

BASIC

Gene AP000542.3, Length 6,114 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000542.3-201ENST00000623391 NSFP46459 744 aaKnown RBP9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 USP17L2Q6R6M4 530 aa9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 ARHGAP24Q8N264 748 aa9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 TIPINQ9BVW5 301 aa9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 ZNF408Q9H9D4 720 aa9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 TBC1D22BQ9NU19 505 aa9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 SEPT9Q9UHD8 586 aaPredicted RBP9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 ODF2LQ9ULJ1 636 aa9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 PASKQ96RG2 1323 aa9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 ZNF609O15014 1411 aa9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 ATG9AQ7Z3C6 839 aa9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 RSAD2Q8WXG1 361 aa9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 POMGNT1Q8WZA1 660 aa9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 SPZ1Q9BXG8 430 aa9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 COL3A1P02461 1466 aaPredicted RBP9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 TLDC2A0PJX2 215 aa9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 ZNF233A6NK53 670 aa9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 KRIT1O00522 736 aa9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 ZNF189O75820 626 aaPredicted RBP9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 CD2BP2O95400 341 aaKnown RBP9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 KRT81Q14533 505 aa9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 EAPPQ56P03 285 aaPredicted RBP9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 MAP7D3Q8IWC1 876 aa9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 FNBP4Q8N3X1 1017 aaPredicted RBP9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 SEL1LQ9UBV2 794 aa9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 CDC23Q9UJX2 597 aa9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 ECE2O60344 883 aa9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 RFX1P22670 979 aa9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 SMARCA1P28370 1054 aa9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 SFNP31947 248 aa9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 RAD51AP2Q09MP3 1159 aa9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 PPP1R21Q6ZMI0 780 aa9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 DCP1AQ9NPI6 582 aaPredicted RBP9.69□□□□□ -0.86
AP000542.3-201ENST00000623391 LARGE1O95461 756 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 ATP2A3Q93084 1043 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 RRAGDQ9NQL2 400 aaPredicted RBP9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 GINM1Q9NU53 330 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 I3L4J1 428 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 MMP10P09238 476 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 KLHL7Q8IXQ5 586 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 METTL13Q8N6R0 699 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 ARHGEF1Q92888 912 aaKnown RBP9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 PLCG1P19174 1290 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 CNGA1P29973 690 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 PRELPP51888 382 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 TCP11X2Q5H9J9 407 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 AP5M1Q9H0R1 490 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 EMILIN3Q9NT22 766 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 BARHL2Q9NY43 387 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 KMT5BQ4FZB7 885 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 PI16Q6UXB8 463 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 C11orf57Q6ZUT1 292 aaPredicted RBP9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 MRPL47Q9HD33 250 aaKnown RBP9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 HOXC10Q9NYD6 342 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 USTQ9Y2C2 406 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 PCDHB6Q9Y5E3 794 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 PDS5AQ29RF7 1337 aaKnown RBP9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 KCNK3O14649 394 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 USP11P51784 963 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 RBL2Q08999 1139 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 TKFCQ3LXA3 575 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 DPCR1Q3MIW9 517 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 HHATQ5VTY9 493 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 CYB5R4Q7L1T6 521 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 CCT6BQ92526 530 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 DYNLL2Q96FJ2 89 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 TMEM47Q9BQJ4 181 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 JRKLQ9Y4A0 524 aa9.68□□□□□ -0.86
AP000542.3-201ENST00000623391 ADGRB2O60241 1585 aa9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 CASP14P31944 242 aa9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 EXOSC10Q01780 885 aaKnown RBP9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 ELOA2Q8IYF1 753 aaPredicted RBP9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 NEDD1Q8NHV4 660 aa9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 RAD54LQ92698 747 aa9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 MROH1Q8NDA8 1641 aa9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 CLRN2A0PK11 232 aa9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 NBPF26B4DH59 902 aa9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 KYAT1Q16773 422 aa9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 NBPF10Q6P3W6 841 aaKnown RBP9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 NBPF15Q8N660 670 aa9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 FAM71BQ8TC56 605 aa9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 LRRIQ4A6NIV6 560 aa9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 GDF11O95390 407 aa9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 KRT76Q01546 638 aa9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 TNFAIP2Q03169 654 aa9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 TRIM50Q86XT4 487 aa9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 MED10Q9BTT4 135 aa9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 BEGAINQ9BUH8 593 aa9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 SPATA31A5Q5VU36 1347 aa9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 SPATA31A7Q8IWB4 1347 aa9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 USP17L5A8MUK1 530 aa9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 PFDN6O15212 129 aa9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 GPSM2P81274 684 aa9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 MB21D1Q8N884 522 aa9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 BCAP29Q9UHQ4 241 aa9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 PCDHA6Q9UN73 950 aa9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 PCDHA8Q9Y5H6 950 aa9.67□□□□□ -0.86
AP000542.3-201ENST00000623391 GSG1L2A8MUP6 293 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms