RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 TADA3O75528 432 aa6.93□□□□□ -1.3
BRCA1-229ENST00000621897 SASH1O94885 1247 aa6.93□□□□□ -1.3
BRCA1-229ENST00000621897 CTSWP56202 376 aa6.93□□□□□ -1.3
BRCA1-229ENST00000621897 MTERF2Q49AM1 385 aa6.93□□□□□ -1.3
BRCA1-229ENST00000621897 EMC4Q5J8M3 183 aa6.93□□□□□ -1.3
BRCA1-229ENST00000621897 FOXB2Q5VYV0 432 aa6.93□□□□□ -1.3
BRCA1-229ENST00000621897 STEAP3Q658P3 488 aa6.93□□□□□ -1.3
BRCA1-229ENST00000621897 RSPO2Q6UXX9 243 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-229ENST00000621897 CD300LDQ6UXZ3 194 aa6.93□□□□□ -1.3
BRCA1-229ENST00000621897 SP8Q8IXZ3 490 aa6.93□□□□□ -1.3
BRCA1-229ENST00000621897 ARRDC4Q8NCT1 418 aa6.93□□□□□ -1.3
BRCA1-229ENST00000621897 DCAF4Q8WV16 495 aa6.93□□□□□ -1.3
BRCA1-229ENST00000621897 ZBTB8AQ96BR9 441 aa6.93□□□□□ -1.3
BRCA1-229ENST00000621897 SPATA25Q9BR10 227 aa6.93□□□□□ -1.3
BRCA1-229ENST00000621897 CCDC113Q9H0I3 377 aa6.93□□□□□ -1.3
BRCA1-229ENST00000621897 EPB41L1Q9H4G0 881 aa6.93□□□□□ -1.3
BRCA1-229ENST00000621897 ASXL2Q76L83 1435 aa6.93□□□□□ -1.3
BRCA1-229ENST00000621897 TCRBV5S2A0A599 114 aa6.92□□□□□ -1.3
BRCA1-229ENST00000621897 SSRP1Q08945 709 aaKnown RBP6.92□□□□□ -1.3
BRCA1-229ENST00000621897 IFRD2Q12894 506 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-229ENST00000621897 RASA3Q14644 834 aa6.92□□□□□ -1.3
BRCA1-229ENST00000621897 CR1LQ2VPA4 569 aa6.92□□□□□ -1.3
BRCA1-229ENST00000621897 LINC00482Q8N8I6 264 aa6.92□□□□□ -1.3
BRCA1-229ENST00000621897 SIRPGQ9P1W8 387 aa6.92□□□□□ -1.3
BRCA1-229ENST00000621897 PCDHB4Q9Y5E5 795 aa6.92□□□□□ -1.3
BRCA1-229ENST00000621897 FAM221BA6H8Z2 402 aa6.91□□□□□ -1.3
BRCA1-229ENST00000621897 DGKIO75912 1065 aa6.91□□□□□ -1.3
BRCA1-229ENST00000621897 RBL2Q08999 1139 aa6.91□□□□□ -1.3
BRCA1-229ENST00000621897 STYK1Q6J9G0 422 aa6.91□□□□□ -1.3
BRCA1-229ENST00000621897 LBX2Q6XYB7 198 aa6.91□□□□□ -1.3
BRCA1-229ENST00000621897 C11orf84Q9BUA3 381 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-229ENST00000621897 HIRIP3Q9BW71 556 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-229ENST00000621897 KCNC1P48547 511 aa6.9□□□□□ -1.3
BRCA1-229ENST00000621897 ITGA1P56199 1179 aa6.9□□□□□ -1.3
BRCA1-229ENST00000621897 CHRNA2Q15822 529 aa6.9□□□□□ -1.3
BRCA1-229ENST00000621897 FAM209AQ5JX71 171 aa6.9□□□□□ -1.3
BRCA1-229ENST00000621897 CARFQ8N187 725 aa6.9□□□□□ -1.3
BRCA1-229ENST00000621897 PIP4K2CQ8TBX8 421 aa6.9□□□□□ -1.3
BRCA1-229ENST00000621897 ARMC5Q96C12 935 aa6.9□□□□□ -1.3
BRCA1-229ENST00000621897 ADAM7Q9H2U9 754 aa6.9□□□□□ -1.3
BRCA1-229ENST00000621897 MYOTQ9UBF9 498 aa6.9□□□□□ -1.3
BRCA1-229ENST00000621897 TRAF6Q9Y4K3 522 aa6.9□□□□□ -1.3
BRCA1-229ENST00000621897 FAM153BP0C7A2 387 aa6.89□□□□□ -1.31
BRCA1-229ENST00000621897 COL6A2P12110 1019 aa6.89□□□□□ -1.31
BRCA1-229ENST00000621897 GRK2P25098 689 aa6.89□□□□□ -1.31
BRCA1-229ENST00000621897 THBS2P35442 1172 aa6.89□□□□□ -1.31
BRCA1-229ENST00000621897 GRK3P35626 688 aa6.89□□□□□ -1.31
BRCA1-229ENST00000621897 GPR85P60893 370 aa6.89□□□□□ -1.31
BRCA1-229ENST00000621897 ZC3H18Q86VM9 953 aaKnown RBP6.89□□□□□ -1.31
BRCA1-229ENST00000621897 RBM12BQ8IXT5 1001 aaKnown RBP6.89□□□□□ -1.31
BRCA1-229ENST00000621897 EXOC2Q96KP1 924 aa6.89□□□□□ -1.31
BRCA1-229ENST00000621897 KCNJ15Q99712 375 aa6.89□□□□□ -1.31
BRCA1-229ENST00000621897 KRTAP4-7Q9BYR0 210 aa6.89□□□□□ -1.31
BRCA1-229ENST00000621897 SMOC1Q9H4F8 434 aa6.89□□□□□ -1.31
BRCA1-229ENST00000621897 SLC6A20Q9NP91 592 aa6.89□□□□□ -1.31
BRCA1-229ENST00000621897 SNTG2Q9NY99 539 aa6.89□□□□□ -1.31
BRCA1-229ENST00000621897 RTEL1Q9NZ71 1219 aa6.89□□□□□ -1.31
BRCA1-229ENST00000621897 DTLQ9NZJ0 730 aa6.89□□□□□ -1.31
BRCA1-229ENST00000621897 WASF3Q9UPY6 502 aa6.89□□□□□ -1.31
BRCA1-229ENST00000621897 SLC27A2O14975 620 aa6.88□□□□□ -1.31
BRCA1-229ENST00000621897 LRG1P02750 347 aa6.88□□□□□ -1.31
BRCA1-229ENST00000621897 C6orf222P0C671 652 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-229ENST00000621897 ADAM9Q13443 819 aa6.88□□□□□ -1.31
BRCA1-229ENST00000621897 KIZQ2M2Z5 673 aa6.88□□□□□ -1.31
BRCA1-229ENST00000621897 IFNL3Q8IZI9 196 aa6.88□□□□□ -1.31
BRCA1-229ENST00000621897 ZBTB38Q8NAP3 1195 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-229ENST00000621897 KYQ8NBH2 561 aa6.88□□□□□ -1.31
BRCA1-229ENST00000621897 DEPDC7Q96QD5 511 aa6.88□□□□□ -1.31
BRCA1-229ENST00000621897 ZFYVE21Q9BQ24 234 aa6.88□□□□□ -1.31
BRCA1-229ENST00000621897 YIPF4Q9BSR8 244 aa6.88□□□□□ -1.31
BRCA1-229ENST00000621897 NTMQ9P121 344 aa6.88□□□□□ -1.31
BRCA1-229ENST00000621897 ASH2LQ9UBL3 628 aa6.88□□□□□ -1.31
BRCA1-229ENST00000621897 KDM2BQ8NHM5 1336 aa6.87□□□□□ -1.31
BRCA1-229ENST00000621897 TRBV23-1A0A0A0MS06 115 aa6.87□□□□□ -1.31
BRCA1-229ENST00000621897 SARSP49591 514 aaKnown RBP6.87□□□□□ -1.31
BRCA1-229ENST00000621897 NKX3-2P78367 333 aa6.87□□□□□ -1.31
BRCA1-229ENST00000621897 NFIXQ14938 502 aa6.87□□□□□ -1.31
BRCA1-229ENST00000621897 NT5DC1Q5TFE4 455 aa6.87□□□□□ -1.31
BRCA1-229ENST00000621897 TEPPQ6URK8 271 aa6.87□□□□□ -1.31
BRCA1-229ENST00000621897 OTOP3Q7RTS5 596 aa6.87□□□□□ -1.31
BRCA1-229ENST00000621897 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.87□□□□□ -1.31
BRCA1-229ENST00000621897 PHOSPHO1Q8TCT1 267 aa6.87□□□□□ -1.31
BRCA1-229ENST00000621897 TOE1Q96GM8 510 aaKnown RBP6.87□□□□□ -1.31
BRCA1-229ENST00000621897 CDC6Q99741 560 aa6.87□□□□□ -1.31
BRCA1-229ENST00000621897 IPPKQ9H8X2 491 aa6.87□□□□□ -1.31
BRCA1-229ENST00000621897 RBPJLQ9UBG7 517 aa6.87□□□□□ -1.31
BRCA1-229ENST00000621897 NKRFO15226 690 aaKnown RBP eCLIP6.86□□□□□ -1.31
BRCA1-229ENST00000621897 SMARCA5O60264 1052 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-229ENST00000621897 LTFP02788 710 aa6.86□□□□□ -1.31
BRCA1-229ENST00000621897 SOD2P04179 222 aa6.86□□□□□ -1.31
BRCA1-229ENST00000621897 RTP5Q14D33 572 aa6.86□□□□□ -1.31
BRCA1-229ENST00000621897 HABP4Q5JVS0 413 aaKnown RBP6.86□□□□□ -1.31
BRCA1-229ENST00000621897 PRR31Q5SQ13 230 aa6.86□□□□□ -1.31
BRCA1-229ENST00000621897 TTLL7Q6ZT98 887 aa6.86□□□□□ -1.31
BRCA1-229ENST00000621897 ZNF761Q86XN6 746 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-229ENST00000621897 SCUBE1Q8IWY4 988 aa6.86□□□□□ -1.31
BRCA1-229ENST00000621897 PMFBP1Q8TBY8 1022 aa6.86□□□□□ -1.31
BRCA1-229ENST00000621897 CLEC4DQ8WXI8 215 aa6.86□□□□□ -1.31
BRCA1-229ENST00000621897 RELTQ969Z4 430 aa6.86□□□□□ -1.31
BRCA1-229ENST00000621897 ZSWIM3Q96MP5 696 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms