RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 LINC01553A4QN01 128 aa19.53■□□□□ 0.72
TARDBP-225ENST00000621715 EIF3JO75822 258 aaKnown RBP19.53■□□□□ 0.72
TARDBP-225ENST00000621715 PARP1P09874 1014 aaKnown RBP19.53■□□□□ 0.72
TARDBP-225ENST00000621715 HOXD8P13378 290 aaPredicted RBP19.53■□□□□ 0.72
TARDBP-225ENST00000621715 HSDL1Q3SXM5 330 aa19.53■□□□□ 0.72
TARDBP-225ENST00000621715 IQCA1Q86XH1 822 aa19.53■□□□□ 0.72
TARDBP-225ENST00000621715 CCDC155Q8N6L0 562 aa19.53■□□□□ 0.72
TARDBP-225ENST00000621715 C7orf31Q8N865 590 aa19.53■□□□□ 0.72
TARDBP-225ENST00000621715 MTMR8Q96EF0 704 aa19.53■□□□□ 0.72
TARDBP-225ENST00000621715 MRPL11Q9Y3B7 192 aaKnown RBP19.53■□□□□ 0.72
TARDBP-225ENST00000621715 MRVI1Q9Y6F6 885 aa19.53■□□□□ 0.72
TARDBP-225ENST00000621715 HOXA13P31271 388 aaPredicted RBP19.52■□□□□ 0.72
TARDBP-225ENST00000621715 GHRHRQ02643 423 aa19.52■□□□□ 0.72
TARDBP-225ENST00000621715 MYSM1Q5VVJ2 828 aa19.52■□□□□ 0.72
TARDBP-225ENST00000621715 CYB5R4Q7L1T6 521 aa19.52■□□□□ 0.72
TARDBP-225ENST00000621715 MCF2L2Q86YR7 1114 aa19.52■□□□□ 0.72
TARDBP-225ENST00000621715 PDCD2LQ9BRP1 358 aa19.52■□□□□ 0.72
TARDBP-225ENST00000621715 LRFN3Q9BTN0 628 aa19.52■□□□□ 0.72
TARDBP-225ENST00000621715 ZBED2Q9BTP6 218 aa19.52■□□□□ 0.72
TARDBP-225ENST00000621715 MAF1Q9H063 256 aa19.52■□□□□ 0.72
TARDBP-225ENST00000621715 TELO2Q9Y4R8 837 aa19.52■□□□□ 0.72
TARDBP-225ENST00000621715 DHX16O60231 1041 aaKnown RBP19.51■□□□□ 0.71
TARDBP-225ENST00000621715 ERVK-21P61565 698 aa19.51■□□□□ 0.71
TARDBP-225ENST00000621715 PTK7Q13308 1070 aa19.51■□□□□ 0.71
TARDBP-225ENST00000621715 SEC23AQ15436 765 aa19.51■□□□□ 0.71
TARDBP-225ENST00000621715 RAD9AQ99638 391 aa19.51■□□□□ 0.71
TARDBP-225ENST00000621715 C17orf80Q9BSJ5 609 aa19.51■□□□□ 0.71
TARDBP-225ENST00000621715 C16orf70Q9BSU1 422 aa19.51■□□□□ 0.71
TARDBP-225ENST00000621715 OSBPL3Q9H4L5 887 aa19.51■□□□□ 0.71
TARDBP-225ENST00000621715 SENP2Q9HC62 589 aa19.51■□□□□ 0.71
TARDBP-225ENST00000621715 MAD2L2Q9UI95 211 aa19.51■□□□□ 0.71
TARDBP-225ENST00000621715 TRIOO75962 3097 aa19.5■□□□□ 0.71
TARDBP-225ENST00000621715 WDFY4Q6ZS81 3184 aa19.5■□□□□ 0.71
TARDBP-225ENST00000621715 MYO7AQ13402 2215 aa19.5■□□□□ 0.71
TARDBP-225ENST00000621715 ABHD14A-ACY1A0A1B0GW23 586 aa19.5■□□□□ 0.71
TARDBP-225ENST00000621715 MYCLP12524 364 aaPredicted RBP19.5■□□□□ 0.71
TARDBP-225ENST00000621715 UBA1P22314 1058 aaKnown RBP19.5■□□□□ 0.71
TARDBP-225ENST00000621715 LAMC2Q13753 1193 aa19.5■□□□□ 0.71
TARDBP-225ENST00000621715 CELF3Q5SZQ8 465 aaKnown RBP19.5■□□□□ 0.71
TARDBP-225ENST00000621715 STOX1Q6ZVD7 989 aa19.5■□□□□ 0.71
TARDBP-225ENST00000621715 CHD1LQ86WJ1 897 aa19.5■□□□□ 0.71
TARDBP-225ENST00000621715 DHX37Q8IY37 1157 aaKnown RBP19.5■□□□□ 0.71
TARDBP-225ENST00000621715 DSCC1Q9BVC3 393 aa19.5■□□□□ 0.71
TARDBP-225ENST00000621715 C1QTNF1Q9BXJ1 281 aa19.5■□□□□ 0.71
TARDBP-225ENST00000621715 ATG2AQ2TAZ0 1938 aa19.5■□□□□ 0.71
TARDBP-225ENST00000621715 FAM86C2PA6NEL3 165 aa19.49■□□□□ 0.71
TARDBP-225ENST00000621715 GGPS1O95749 300 aa19.49■□□□□ 0.71
TARDBP-225ENST00000621715 MFAP1P55081 439 aaKnown RBP19.49■□□□□ 0.71
TARDBP-225ENST00000621715 NUCB1Q02818 461 aa19.49■□□□□ 0.71
TARDBP-225ENST00000621715 PGM5Q15124 567 aa19.49■□□□□ 0.71
TARDBP-225ENST00000621715 SERINC5Q86VE9 423 aa19.49■□□□□ 0.71
TARDBP-225ENST00000621715 VSIG10LQ86VR7 867 aa19.49■□□□□ 0.71
TARDBP-225ENST00000621715 TGS1Q96RS0 853 aaKnown RBP19.49■□□□□ 0.71
TARDBP-225ENST00000621715 AMNQ9BXJ7 453 aa19.49■□□□□ 0.71
TARDBP-225ENST00000621715 TAF6LQ9Y6J9 622 aa19.49■□□□□ 0.71
TARDBP-225ENST00000621715 PALM3A6NDB9 673 aaPredicted RBP19.48■□□□□ 0.71
TARDBP-225ENST00000621715 KLRF2D3W0D1 207 aa19.48■□□□□ 0.71
TARDBP-225ENST00000621715 LGR5O75473 907 aa19.48■□□□□ 0.71
TARDBP-225ENST00000621715 HOXC8P31273 242 aa19.48■□□□□ 0.71
TARDBP-225ENST00000621715 IKBKEQ14164 716 aa19.48■□□□□ 0.71
TARDBP-225ENST00000621715 CCDC178Q5BJE1 867 aa19.48■□□□□ 0.71
TARDBP-225ENST00000621715 DBF4BQ8NFT6 615 aa19.48■□□□□ 0.71
TARDBP-225ENST00000621715 SPATA33Q96N06 139 aa19.48■□□□□ 0.71
TARDBP-225ENST00000621715 KATNAL1Q9BW62 490 aa19.48■□□□□ 0.71
TARDBP-225ENST00000621715 DIAPH3Q9NSV4 1193 aa19.48■□□□□ 0.71
TARDBP-225ENST00000621715 LMCD1Q9NZU5 365 aa19.48■□□□□ 0.71
TARDBP-225ENST00000621715 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.47■□□□□ 0.71
TARDBP-225ENST00000621715 CYTH3O43739 400 aa19.47■□□□□ 0.71
TARDBP-225ENST00000621715 PPFIA4O75335 1185 aa19.47■□□□□ 0.71
TARDBP-225ENST00000621715 PARNO95453 639 aaKnown RBP19.47■□□□□ 0.71
TARDBP-225ENST00000621715 THPOP40225 353 aa19.47■□□□□ 0.71
TARDBP-225ENST00000621715 IFIT1BQ5T764 474 aaKnown RBP19.47■□□□□ 0.71
TARDBP-225ENST00000621715 FAM122AQ96E09 287 aa19.47■□□□□ 0.71
TARDBP-225ENST00000621715 UBE2ZQ9H832 354 aaPredicted RBP19.47■□□□□ 0.71
TARDBP-225ENST00000621715 PCDHA1Q9Y5I3 950 aa19.47■□□□□ 0.71
TARDBP-225ENST00000621715 NLRC5Q86WI3 1866 aa19.46■□□□□ 0.71
TARDBP-225ENST00000621715 ZBTB5O15062 677 aa19.46■□□□□ 0.71
TARDBP-225ENST00000621715 HTRA4P83105 476 aaPredicted RBP19.46■□□□□ 0.71
TARDBP-225ENST00000621715 SEMA3FQ13275 785 aa19.46■□□□□ 0.71
TARDBP-225ENST00000621715 IMMTQ16891 758 aaKnown RBP19.46■□□□□ 0.71
TARDBP-225ENST00000621715 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.46■□□□□ 0.71
TARDBP-225ENST00000621715 PIGSQ96S52 555 aa19.46■□□□□ 0.71
TARDBP-225ENST00000621715 UBAC1Q9BSL1 405 aa19.46■□□□□ 0.71
TARDBP-225ENST00000621715 TREHO43280 583 aa19.45■□□□□ 0.7
TARDBP-225ENST00000621715 NT5C2P49902 561 aa19.45■□□□□ 0.7
TARDBP-225ENST00000621715 MRPS9P82933 396 aaKnown RBP19.45■□□□□ 0.7
TARDBP-225ENST00000621715 PLEKHG4Q58EX7 1191 aa19.45■□□□□ 0.7
TARDBP-225ENST00000621715 FCHSD1Q86WN1 690 aa19.45■□□□□ 0.7
TARDBP-225ENST00000621715 HOMER1Q86YM7 354 aa19.45■□□□□ 0.7
TARDBP-225ENST00000621715 MYOCDQ8IZQ8 938 aa19.45■□□□□ 0.7
TARDBP-225ENST00000621715 SP7Q8TDD2 431 aaPredicted RBP19.45■□□□□ 0.7
TARDBP-225ENST00000621715 KRT23Q9C075 422 aa19.45■□□□□ 0.7
TARDBP-225ENST00000621715 MUC6Q6W4X9 2439 aa19.44■□□□□ 0.7
TARDBP-225ENST00000621715 RSPH10B2B2RC85 870 aa19.44■□□□□ 0.7
TARDBP-225ENST00000621715 LGALS2P05162 132 aa19.44■□□□□ 0.7
TARDBP-225ENST00000621715 RSPH10BP0C881 870 aa19.44■□□□□ 0.7
TARDBP-225ENST00000621715 SMIM10L2AP0DMW4 78 aa19.44■□□□□ 0.7
TARDBP-225ENST00000621715 SMIM10L2BP0DMW5 78 aa19.44■□□□□ 0.7
TARDBP-225ENST00000621715 IL9P15248 144 aa19.44■□□□□ 0.7
TARDBP-225ENST00000621715 KCNA5P22460 613 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms