RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 PNMA3Q9UL41 463 aa17.92■□□□□ 0.46
CBWD3-216ENST00000621396 PNMA2Q9UL42 364 aa17.92■□□□□ 0.46
CBWD3-216ENST00000621396 HTTP42858 3142 aa17.92■□□□□ 0.46
CBWD3-216ENST00000621396 EML1O00423 815 aa17.91■□□□□ 0.46
CBWD3-216ENST00000621396 ATP9AO75110 1047 aa17.91■□□□□ 0.46
CBWD3-216ENST00000621396 CCDC192P0DO97 292 aa17.91■□□□□ 0.46
CBWD3-216ENST00000621396 CYP4A11Q02928 519 aa17.91■□□□□ 0.46
CBWD3-216ENST00000621396 TKFCQ3LXA3 575 aa17.91■□□□□ 0.46
CBWD3-216ENST00000621396 PDXDC2PQ6P474 469 aa17.91■□□□□ 0.46
CBWD3-216ENST00000621396 EEPD1Q7L9B9 569 aa17.91■□□□□ 0.46
CBWD3-216ENST00000621396 KCNK18Q7Z418 384 aa17.91■□□□□ 0.46
CBWD3-216ENST00000621396 SLFN12Q8IYM2 578 aa17.91■□□□□ 0.46
CBWD3-216ENST00000621396 AK8Q96MA6 479 aa17.91■□□□□ 0.46
CBWD3-216ENST00000621396 MAP3K20Q9NYL2 800 aaKnown RBP17.91■□□□□ 0.46
CBWD3-216ENST00000621396 TRPM7Q96QT4 1865 aa17.91■□□□□ 0.46
CBWD3-216ENST00000621396 IPO5O00410 1097 aaKnown RBP17.91■□□□□ 0.46
CBWD3-216ENST00000621396 CTAGE5O15320 804 aa17.91■□□□□ 0.46
CBWD3-216ENST00000621396 GRB10Q13322 594 aa17.91■□□□□ 0.46
CBWD3-216ENST00000621396 MTMR1Q13613 665 aa17.91■□□□□ 0.46
CBWD3-216ENST00000621396 LRCH2Q5VUJ6 765 aa17.91■□□□□ 0.46
CBWD3-216ENST00000621396 ANKRD23Q86SG2 305 aa17.91■□□□□ 0.46
CBWD3-216ENST00000621396 NSUN6Q8TEA1 469 aaKnown RBP17.91■□□□□ 0.46
CBWD3-216ENST00000621396 CCSER1Q9C0I3 900 aa17.91■□□□□ 0.46
CBWD3-216ENST00000621396 PDIA5Q14554 519 aa17.9■□□□□ 0.46
CBWD3-216ENST00000621396 CYP4F22Q6NT55 531 aa17.9■□□□□ 0.46
CBWD3-216ENST00000621396 C11orf57Q6ZUT1 292 aaPredicted RBP17.9■□□□□ 0.46
CBWD3-216ENST00000621396 PNMA5Q96PV4 448 aa17.9■□□□□ 0.46
CBWD3-216ENST00000621396 GRPEL1Q9HAV7 217 aa17.9■□□□□ 0.46
CBWD3-216ENST00000621396 CPA4Q9UI42 421 aa17.9■□□□□ 0.46
CBWD3-216ENST00000621396 VAV3Q9UKW4 847 aa17.9■□□□□ 0.46
CBWD3-216ENST00000621396 TLL2Q9Y6L7 1015 aa17.9■□□□□ 0.46
CBWD3-216ENST00000621396 POTEB3A0JP26 581 aa17.9■□□□□ 0.46
CBWD3-216ENST00000621396 RGS20O76081 388 aa17.9■□□□□ 0.46
CBWD3-216ENST00000621396 TOMM70O94826 608 aa17.9■□□□□ 0.46
CBWD3-216ENST00000621396 DEKP35659 375 aaKnown RBP17.9■□□□□ 0.46
CBWD3-216ENST00000621396 CUL4BQ13620 913 aa17.9■□□□□ 0.46
CBWD3-216ENST00000621396 DPCR1Q3MIW9 517 aa17.9■□□□□ 0.46
CBWD3-216ENST00000621396 KRT79Q5XKE5 535 aa17.9■□□□□ 0.46
CBWD3-216ENST00000621396 POTEBQ6S5H4 581 aa17.9■□□□□ 0.46
CBWD3-216ENST00000621396 TRMT1LQ7Z2T5 733 aaKnown RBP17.9■□□□□ 0.46
CBWD3-216ENST00000621396 VSIG10LQ86VR7 867 aa17.9■□□□□ 0.46
CBWD3-216ENST00000621396 GPRC5AQ8NFJ5 357 aa17.9■□□□□ 0.46
CBWD3-216ENST00000621396 RAB34Q9BZG1 259 aa17.9■□□□□ 0.46
CBWD3-216ENST00000621396 RGL1Q9NZL6 768 aa17.9■□□□□ 0.46
CBWD3-216ENST00000621396 A0A0G2JMZ2 1700 aa17.9■□□□□ 0.46
CBWD3-216ENST00000621396 SOWAHBA6NEL2 793 aa17.89■□□□□ 0.45
CBWD3-216ENST00000621396 FAM155AB1AL88 458 aaPredicted RBP17.89■□□□□ 0.45
CBWD3-216ENST00000621396 POTEB2H3BUK9 544 aa17.89■□□□□ 0.45
CBWD3-216ENST00000621396 MED24O75448 989 aa17.89■□□□□ 0.45
CBWD3-216ENST00000621396 ITGB3BPQ13352 177 aaPredicted RBP17.89■□□□□ 0.45
CBWD3-216ENST00000621396 OTOP1Q7RTM1 612 aa17.89■□□□□ 0.45
CBWD3-216ENST00000621396 TELO2Q9Y4R8 837 aa17.89■□□□□ 0.45
CBWD3-216ENST00000621396 UBIAD1Q9Y5Z9 338 aa17.89■□□□□ 0.45
CBWD3-216ENST00000621396 DNAH12Q6ZR08 3092 aa17.89■□□□□ 0.45
CBWD3-216ENST00000621396 GAS7O60861 476 aa17.89■□□□□ 0.45
CBWD3-216ENST00000621396 PSMD10O75832 226 aa17.89■□□□□ 0.45
CBWD3-216ENST00000621396 CCT6AP40227 531 aaKnown RBP17.89■□□□□ 0.45
CBWD3-216ENST00000621396 FAM20AQ96MK3 541 aa17.89■□□□□ 0.45
CBWD3-216ENST00000621396 CCDC39Q9UFE4 941 aa17.89■□□□□ 0.45
CBWD3-216ENST00000621396 KIAA1024Q9UPX6 916 aa17.89■□□□□ 0.45
CBWD3-216ENST00000621396 FRMPD4Q14CM0 1322 aa17.88■□□□□ 0.45
CBWD3-216ENST00000621396 POTEFA5A3E0 1075 aa17.88■□□□□ 0.45
CBWD3-216ENST00000621396 TMEM88BA6NKF7 163 aa17.88■□□□□ 0.45
CBWD3-216ENST00000621396 TBX3O15119 743 aa17.88■□□□□ 0.45
CBWD3-216ENST00000621396 XRCC6P12956 609 aaKnown RBP eCLIP17.88■□□□□ 0.45
CBWD3-216ENST00000621396 BMP6P22004 513 aa17.88■□□□□ 0.45
CBWD3-216ENST00000621396 POTEGQ6S5H5 508 aa17.88■□□□□ 0.45
CBWD3-216ENST00000621396 CATSPER3Q86XQ3 398 aa17.88■□□□□ 0.45
CBWD3-216ENST00000621396 CALML4Q96GE6 196 aa17.88■□□□□ 0.45
CBWD3-216ENST00000621396 CDK5RAP3Q96JB5 506 aa17.88■□□□□ 0.45
CBWD3-216ENST00000621396 JADE2Q9NQC1 790 aa17.88■□□□□ 0.45
CBWD3-216ENST00000621396 FBXO40Q9UH90 709 aa17.88■□□□□ 0.45
CBWD3-216ENST00000621396 SLC10A3P09131 477 aa17.88■□□□□ 0.45
CBWD3-216ENST00000621396 SP4Q02446 784 aa17.88■□□□□ 0.45
CBWD3-216ENST00000621396 KCTD2Q14681 263 aa17.88■□□□□ 0.45
CBWD3-216ENST00000621396 LUZP1Q86V48 1076 aa17.88■□□□□ 0.45
CBWD3-216ENST00000621396 ZNF784Q8NCA9 323 aaPredicted RBP17.88■□□□□ 0.45
CBWD3-216ENST00000621396 SLC5A5Q92911 643 aa17.88■□□□□ 0.45
CBWD3-216ENST00000621396 MMP19Q99542 508 aa17.88■□□□□ 0.45
CBWD3-216ENST00000621396 UNC45AQ9H3U1 944 aa17.88■□□□□ 0.45
CBWD3-216ENST00000621396 E9PMD0 336 aa17.87■□□□□ 0.45
CBWD3-216ENST00000621396 ZBTB39O15060 712 aa17.87■□□□□ 0.45
CBWD3-216ENST00000621396 SLC25A27O95847 323 aa17.87■□□□□ 0.45
CBWD3-216ENST00000621396 YY1P25490 414 aa17.87■□□□□ 0.45
CBWD3-216ENST00000621396 CCND2P30279 289 aa17.87■□□□□ 0.45
CBWD3-216ENST00000621396 ALDH5A1P51649 535 aaPredicted RBP17.87■□□□□ 0.45
CBWD3-216ENST00000621396 PSMC6P62333 389 aa17.87■□□□□ 0.45
CBWD3-216ENST00000621396 MCM6Q14566 821 aa17.87■□□□□ 0.45
CBWD3-216ENST00000621396 SH3RF1Q7Z6J0 888 aa17.87■□□□□ 0.45
CBWD3-216ENST00000621396 TEX2Q8IWB9 1127 aa17.87■□□□□ 0.45
CBWD3-216ENST00000621396 AGO4Q9HCK5 861 aaKnown RBP17.87■□□□□ 0.45
CBWD3-216ENST00000621396 BLOC1S4Q9NUP1 217 aa17.87■□□□□ 0.45
CBWD3-216ENST00000621396 HTRA3P83110 453 aa17.87■□□□□ 0.45
CBWD3-216ENST00000621396 SETQ01105 290 aaPredicted RBP17.87■□□□□ 0.45
CBWD3-216ENST00000621396 SEMA3FQ13275 785 aa17.87■□□□□ 0.45
CBWD3-216ENST00000621396 CTTNQ14247 550 aaKnown RBP17.87■□□□□ 0.45
CBWD3-216ENST00000621396 SEPT14Q6ZU15 432 aa17.87■□□□□ 0.45
CBWD3-216ENST00000621396 SMYD4Q8IYR2 804 aaPredicted RBP17.87■□□□□ 0.45
CBWD3-216ENST00000621396 PARK7Q99497 189 aaKnown RBP17.87■□□□□ 0.45
CBWD3-216ENST00000621396 DHX15O43143 795 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 553.3 ms