RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 CCDC151A5D8V7 595 aa10.71□□□□□ -0.7
COL4A6-210ENST00000621266 E9PMD0 336 aa10.71□□□□□ -0.7
COL4A6-210ENST00000621266 H7C0C1 242 aa10.71□□□□□ -0.7
COL4A6-210ENST00000621266 ATP5OP48047 213 aa10.71□□□□□ -0.7
COL4A6-210ENST00000621266 ALS2CLQ60I27 953 aa10.71□□□□□ -0.7
COL4A6-210ENST00000621266 RFX8Q6ZV50 586 aa10.71□□□□□ -0.7
COL4A6-210ENST00000621266 NCAPG2Q86XI2 1143 aa10.71□□□□□ -0.7
COL4A6-210ENST00000621266 TRIM42Q8IWZ5 723 aa10.71□□□□□ -0.7
COL4A6-210ENST00000621266 HOOK2Q96ED9 719 aa10.71□□□□□ -0.7
COL4A6-210ENST00000621266 EEF2KMTQ96G04 330 aa10.71□□□□□ -0.7
COL4A6-210ENST00000621266 DBNDD1Q9H9R9 158 aa10.71□□□□□ -0.7
COL4A6-210ENST00000621266 GNL1P36915 607 aaPredicted RBP10.71□□□□□ -0.7
COL4A6-210ENST00000621266 RAD23BP54727 409 aa10.71□□□□□ -0.7
COL4A6-210ENST00000621266 HADHQ16836 314 aaKnown RBP10.71□□□□□ -0.7
COL4A6-210ENST00000621266 BRDTQ58F21 947 aaPredicted RBP10.71□□□□□ -0.7
COL4A6-210ENST00000621266 C4orf50Q6ZRC1 276 aa10.71□□□□□ -0.7
COL4A6-210ENST00000621266 CCDC90BQ9GZT6 254 aa10.71□□□□□ -0.7
COL4A6-210ENST00000621266 MROH5Q6ZUA9 1318 aa10.71□□□□□ -0.7
COL4A6-210ENST00000621266 MAGI3Q5TCQ9 1506 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 KDM5DQ9BY66 1539 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 A0A0G2JND7 137 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 PDE6AP16499 860 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 DEUP1Q05D60 604 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 TRIP13Q15645 432 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-210ENST00000621266 ENAHQ8N8S7 591 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-210ENST00000621266 SYT2Q8N9I0 419 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-210ENST00000621266 DACH2Q96NX9 599 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 LOC102724428A0A0B4J2F2 783 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 DAB1O75553 588 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 FTCDO95954 541 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 PLS3P13797 630 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 TRPC1P48995 793 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 SIK1P57059 783 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 CCDC15Q0P6D6 951 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 TSTA3Q13630 321 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-210ENST00000621266 SESTD1Q86VW0 696 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 KBTBD3Q8NAB2 608 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 SKA2Q8WVK7 121 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-210ENST00000621266 ECT2Q9H8V3 914 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 ANAPC5Q9UJX4 755 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 RAD17O75943 681 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 HLA-DPA1P20036 260 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 CLIC6Q96NY7 704 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 PLAAQ9Y263 795 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 MBD5Q9P267 1494 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 KDM5CP41229 1560 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 SETD1BQ9UPS6 1966 aaKnown RBP10.7□□□□□ -0.7
COL4A6-210ENST00000621266 A0A087WWV3 80 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 MMEP08473 750 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 PHKG2P15735 406 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 ARHGDIAP52565 204 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 MUM1L1Q5H9M0 696 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 C1orf146Q5VVC0 180 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 FBXL13Q8NEE6 735 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 RIOK1Q9BRS2 568 aaKnown RBP10.7□□□□□ -0.7
COL4A6-210ENST00000621266 MAFGO15525 162 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 GPAA1O43292 621 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 MT-ND3P03897 115 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 CARSP49589 748 aaKnown RBP10.7□□□□□ -0.7
COL4A6-210ENST00000621266 PDE6CP51160 858 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 MYLK4Q86YV6 388 aaPredicted RBP10.7□□□□□ -0.7
COL4A6-210ENST00000621266 NACA2Q9H009 215 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 DNAJC17Q9NVM6 304 aaKnown RBP10.7□□□□□ -0.7
COL4A6-210ENST00000621266 NLRP1Q9C000 1473 aa10.7□□□□□ -0.7
COL4A6-210ENST00000621266 PNMA6EA0A0J9YXQ4 647 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 RASGRF2O14827 1237 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 H2AFZP0C0S5 128 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 COPB1P53618 953 aaKnown RBP10.69□□□□□ -0.7
COL4A6-210ENST00000621266 H2AFVQ71UI9 128 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 CFAP36Q96G28 342 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 KIFC3Q9BVG8 833 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 TARBP1Q13395 1621 aaKnown RBP10.69□□□□□ -0.7
COL4A6-210ENST00000621266 LMNB1P20700 586 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 FAM47EQ6ZV65 393 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 HOMEZQ8IX15 550 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 RNF169Q8NCN4 708 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 CARD10Q9BWT7 1032 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 ING2Q9H160 280 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 KLC4Q9NSK0 619 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 PLEKHG1Q9ULL1 1385 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 SERPINB2P05120 415 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 NONOQ15233 471 aaKnown RBP eCLIP10.69□□□□□ -0.7
COL4A6-210ENST00000621266 ERFEQ4G0M1 354 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 RFX6Q8HWS3 928 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 OLFM3Q96PB7 478 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 METTL14Q9HCE5 456 aaKnown RBP10.69□□□□□ -0.7
COL4A6-210ENST00000621266 PRKAG2Q9UGJ0 569 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 NFU1Q9UMS0 254 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 STAT2P52630 851 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 NOP14P78316 857 aaKnown RBP10.69□□□□□ -0.7
COL4A6-210ENST00000621266 NLGN1Q8N2Q7 840 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 PAWRQ96IZ0 340 aaKnown RBP10.69□□□□□ -0.7
COL4A6-210ENST00000621266 AP1M1Q9BXS5 423 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 PITPNM3Q9BZ71 974 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 KIF24Q5T7B8 1368 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 PRDM1O75626 825 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 DCTN3O75935 186 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 GSPT1P15170 499 aaKnown RBP10.69□□□□□ -0.7
COL4A6-210ENST00000621266 GGCXP38435 758 aa10.69□□□□□ -0.7
COL4A6-210ENST00000621266 TMED10P49755 219 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms