RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 APAF1O14727 1248 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 FGF10O15520 208 aaPredicted RBP4.95□□□□□ -1.62
LRRC39-204ENST00000620882 SNUPNO95149 360 aaKnown RBP4.95□□□□□ -1.62
LRRC39-204ENST00000620882 KRT15P19012 456 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 FPR2P25090 351 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 GPR3P46089 330 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 LAPTM5Q13571 262 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 ZNF267Q14586 743 aaPredicted RBP4.95□□□□□ -1.62
LRRC39-204ENST00000620882 MBTPS1Q14703 1052 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 SEC23AQ15436 765 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 TERF2Q15554 542 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 NKPD1Q17RQ9 610 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 CLEC16AQ2KHT3 1053 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 CPZQ66K79 652 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 BEND4Q6ZU67 534 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 OTOP1Q7RTM1 612 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 KSR1Q8IVT5 923 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 C2orf69Q8N8R5 385 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 FBXW5Q969U6 566 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 PKNOX2Q96KN3 472 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 GPR62Q9BZJ7 368 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 ASCC2Q9H1I8 757 aaPredicted RBP4.95□□□□□ -1.62
LRRC39-204ENST00000620882 CATSPERZQ9NTU4 200 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 BTG4Q9NY30 223 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 TAGLN3Q9UI15 199 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 TCFL5Q9UL49 500 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 FAM50BQ9Y247 325 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 COMMD10Q9Y6G5 202 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 CNTNAP5Q8WYK1 1306 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 HMX2A2RU54 273 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 NKRFO15226 690 aaKnown RBP eCLIP4.95□□□□□ -1.62
LRRC39-204ENST00000620882 XPOTO43592 962 aaKnown RBP4.95□□□□□ -1.62
LRRC39-204ENST00000620882 PPP1R11O60927 126 aaPredicted RBP4.95□□□□□ -1.62
LRRC39-204ENST00000620882 CENPBP07199 599 aaPredicted RBP4.95□□□□□ -1.62
LRRC39-204ENST00000620882 RBP3P10745 1247 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 SMAD3P84022 425 aaKnown RBP4.95□□□□□ -1.62
LRRC39-204ENST00000620882 ADGRE1Q14246 886 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 SMAD2Q15796 467 aaKnown RBP4.95□□□□□ -1.62
LRRC39-204ENST00000620882 CXorf57Q6NSI4 855 aaKnown RBP4.95□□□□□ -1.62
LRRC39-204ENST00000620882 ESRP1Q6NXG1 681 aaKnown RBP4.95□□□□□ -1.62
LRRC39-204ENST00000620882 PNMA8AQ86V59 439 aaPredicted RBP4.95□□□□□ -1.62
LRRC39-204ENST00000620882 C11orf74Q86VG3 221 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 SAMD3Q8N6K7 520 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 EFHBQ8N7U6 833 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 TMEM52Q8NDY8 209 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 SH3RF2Q8TEC5 729 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 CLIP3Q96DZ5 547 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 CDADC1Q9BWV3 514 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 SPEF1Q9Y4P9 236 aa4.95□□□□□ -1.62
LRRC39-204ENST00000620882 GOLGA6CA6NDK9 693 aa4.94□□□□□ -1.62
LRRC39-204ENST00000620882 GOLGA6BA6NDN3 693 aa4.94□□□□□ -1.62
LRRC39-204ENST00000620882 ULK1O75385 1050 aa4.94□□□□□ -1.62
LRRC39-204ENST00000620882 LTFP02788 710 aa4.94□□□□□ -1.62
LRRC39-204ENST00000620882 GOLGA6DP0CG33 693 aa4.94□□□□□ -1.62
LRRC39-204ENST00000620882 COL6A2P12110 1019 aa4.94□□□□□ -1.62
LRRC39-204ENST00000620882 PAMP19021 973 aa4.94□□□□□ -1.62
LRRC39-204ENST00000620882 PAX3P23760 479 aa4.94□□□□□ -1.62
LRRC39-204ENST00000620882 CCND1P24385 295 aa4.94□□□□□ -1.62
LRRC39-204ENST00000620882 KIR3DL1P43629 444 aa4.94□□□□□ -1.62
LRRC39-204ENST00000620882 RECQLP46063 649 aaPredicted RBP4.94□□□□□ -1.62
LRRC39-204ENST00000620882 SESN3P58005 492 aa4.94□□□□□ -1.62
LRRC39-204ENST00000620882 ST5P78524 1137 aa4.94□□□□□ -1.62
LRRC39-204ENST00000620882 BRD3Q15059 726 aa4.94□□□□□ -1.62
LRRC39-204ENST00000620882 ANGEL2Q5VTE6 544 aaKnown RBP4.94□□□□□ -1.62
LRRC39-204ENST00000620882 B3GNT9Q6UX72 402 aa4.94□□□□□ -1.62
LRRC39-204ENST00000620882 C16orf59Q7L2K0 433 aa4.94□□□□□ -1.62
LRRC39-204ENST00000620882 SKAP1Q86WV1 359 aa4.94□□□□□ -1.62
LRRC39-204ENST00000620882 PTRH1Q86Y79 214 aaKnown RBP4.94□□□□□ -1.62
LRRC39-204ENST00000620882 LMBR1Q8WVP7 490 aa4.94□□□□□ -1.62
LRRC39-204ENST00000620882 CHAMP1Q96JM3 812 aa4.94□□□□□ -1.62
LRRC39-204ENST00000620882 PTCHD1Q96NR3 888 aa4.94□□□□□ -1.62
LRRC39-204ENST00000620882 SLC2A13Q96QE2 648 aa4.94□□□□□ -1.62
LRRC39-204ENST00000620882 MMP19Q99542 508 aa4.94□□□□□ -1.62
LRRC39-204ENST00000620882 SARGQ9BW04 601 aa4.94□□□□□ -1.62
LRRC39-204ENST00000620882 SEMA4AQ9H3S1 761 aa4.94□□□□□ -1.62
LRRC39-204ENST00000620882 PTPRHQ9HD43 1115 aa4.94□□□□□ -1.62
LRRC39-204ENST00000620882 GPATCH2Q9NW75 528 aa4.94□□□□□ -1.62
LRRC39-204ENST00000620882 GOLGA6AQ9NYA3 693 aa4.94□□□□□ -1.62
LRRC39-204ENST00000620882 INTUQ9ULD6 942 aa4.94□□□□□ -1.62
LRRC39-204ENST00000620882 TMEM253P0C7T8 217 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 TRIM27P14373 513 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 NAT1P18440 290 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 SERPINB3P29508 390 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 IRF9Q00978 393 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 C4orf46Q504U0 113 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 PRRT3Q5FWE3 981 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 FAM47CQ5HY64 1035 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 TMEM240Q5SV17 173 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 APBB1IPQ7Z5R6 666 aaPredicted RBP4.93□□□□□ -1.62
LRRC39-204ENST00000620882 CATIPQ7Z7H3 387 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 TSPYL5Q86VY4 417 aaPredicted RBP4.93□□□□□ -1.62
LRRC39-204ENST00000620882 NOSTRINQ8IVI9 506 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 SPACA3Q8IXA5 215 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 RBM12BQ8IXT5 1001 aaKnown RBP4.93□□□□□ -1.62
LRRC39-204ENST00000620882 HSPBAP1Q96EW2 488 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 SCARF2Q96GP6 870 aaPredicted RBP4.93□□□□□ -1.62
LRRC39-204ENST00000620882 TEKT5Q96M29 485 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 TBC1D32Q96NH3 1257 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 YIPF2Q9BWQ6 316 aa4.93□□□□□ -1.62
LRRC39-204ENST00000620882 ZMAT4Q9H898 229 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms