RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 CYTH3O43739 400 aa18.54■□□□□ 0.56
CD40-207ENST00000620709 RABGGTBP53611 331 aa18.54■□□□□ 0.56
CD40-207ENST00000620709 TROAPQ12815 778 aa18.54■□□□□ 0.56
CD40-207ENST00000620709 RAB30Q15771 203 aa18.54■□□□□ 0.56
CD40-207ENST00000620709 DGKDQ16760 1214 aa18.54■□□□□ 0.56
CD40-207ENST00000620709 IGDCC4Q8TDY8 1250 aa18.54■□□□□ 0.56
CD40-207ENST00000620709 LIMCH1Q9UPQ0 1083 aa18.54■□□□□ 0.56
CD40-207ENST00000620709 MYH7BA7E2Y1 1941 aa18.53■□□□□ 0.56
CD40-207ENST00000620709 SCN5AQ14524 2016 aa18.53■□□□□ 0.56
CD40-207ENST00000620709 PTPN11Q06124 597 aaPredicted RBP18.53■□□□□ 0.56
CD40-207ENST00000620709 LAMC2Q13753 1193 aa18.53■□□□□ 0.56
CD40-207ENST00000620709 PGM5Q15124 567 aa18.53■□□□□ 0.56
CD40-207ENST00000620709 DHX32Q7L7V1 743 aaKnown RBP18.53■□□□□ 0.56
CD40-207ENST00000620709 IL31RAQ8NI17 732 aa18.53■□□□□ 0.56
CD40-207ENST00000620709 CTCFLQ8NI51 663 aaPredicted RBP18.53■□□□□ 0.56
CD40-207ENST00000620709 PPM1EQ8WY54 764 aa18.53■□□□□ 0.56
CD40-207ENST00000620709 PRDM12Q9H4Q4 367 aa18.53■□□□□ 0.56
CD40-207ENST00000620709 MAP3K20Q9NYL2 800 aaKnown RBP18.53■□□□□ 0.56
CD40-207ENST00000620709 ZNF286BP0CG31 522 aa18.52■□□□□ 0.56
CD40-207ENST00000620709 CCND2P30279 289 aa18.52■□□□□ 0.56
CD40-207ENST00000620709 BFSP2Q13515 415 aa18.52■□□□□ 0.56
CD40-207ENST00000620709 GDF6Q6KF10 455 aaPredicted RBP18.52■□□□□ 0.56
CD40-207ENST00000620709 ZNF654Q8IZM8 581 aa18.52■□□□□ 0.56
CD40-207ENST00000620709 C7orf31Q8N865 590 aa18.52■□□□□ 0.56
CD40-207ENST00000620709 ZSCAN31Q96LW9 406 aaPredicted RBP18.52■□□□□ 0.56
CD40-207ENST00000620709 GAS2L1Q99501 681 aaPredicted RBP18.52■□□□□ 0.56
CD40-207ENST00000620709 LY9Q9HBG7 655 aa18.52■□□□□ 0.56
CD40-207ENST00000620709 GBF1Q92538 1859 aa18.52■□□□□ 0.55
CD40-207ENST00000620709 CCDC69A6NI79 296 aa18.51■□□□□ 0.55
CD40-207ENST00000620709 PFKMP08237 780 aa18.51■□□□□ 0.55
CD40-207ENST00000620709 ACTN1P12814 892 aa18.51■□□□□ 0.55
CD40-207ENST00000620709 MCM5P33992 734 aa18.51■□□□□ 0.55
CD40-207ENST00000620709 PSEN2P49810 448 aa18.51■□□□□ 0.55
CD40-207ENST00000620709 CUL4AQ13619 759 aa18.51■□□□□ 0.55
CD40-207ENST00000620709 RAB11FIP4Q86YS3 637 aa18.51■□□□□ 0.55
CD40-207ENST00000620709 KAT2BQ92831 832 aa18.51■□□□□ 0.55
CD40-207ENST00000620709 RRP36Q96EU6 259 aaKnown RBP18.51■□□□□ 0.55
CD40-207ENST00000620709 SPATA33Q96N06 139 aa18.51■□□□□ 0.55
CD40-207ENST00000620709 SLC28A3Q9HAS3 691 aa18.51■□□□□ 0.55
CD40-207ENST00000620709 SH2B1Q9NRF2 756 aaPredicted RBP18.51■□□□□ 0.55
CD40-207ENST00000620709 YBX2Q9Y2T7 364 aaKnown RBP18.51■□□□□ 0.55
CD40-207ENST00000620709 GGPS1O95749 300 aa18.5■□□□□ 0.55
CD40-207ENST00000620709 IQCF3P0C7M6 154 aa18.5■□□□□ 0.55
CD40-207ENST00000620709 ATP2A2P16615 1042 aaKnown RBP18.5■□□□□ 0.55
CD40-207ENST00000620709 RXRAP19793 462 aa18.5■□□□□ 0.55
CD40-207ENST00000620709 KIF5BP33176 963 aa18.5■□□□□ 0.55
CD40-207ENST00000620709 GHRHRQ02643 423 aa18.5■□□□□ 0.55
CD40-207ENST00000620709 VSIG10LQ86VR7 867 aa18.5■□□□□ 0.55
CD40-207ENST00000620709 SAMD3Q8N6K7 520 aa18.5■□□□□ 0.55
CD40-207ENST00000620709 CCDC155Q8N6L0 562 aa18.5■□□□□ 0.55
CD40-207ENST00000620709 TCEANC2Q96MN5 208 aa18.5■□□□□ 0.55
CD40-207ENST00000620709 MLXIPQ9HAP2 919 aa18.5■□□□□ 0.55
CD40-207ENST00000620709 HDAC6Q9UBN7 1215 aa18.5■□□□□ 0.55
CD40-207ENST00000620709 SEC63Q9UGP8 760 aaKnown RBP18.5■□□□□ 0.55
CD40-207ENST00000620709 MYO9BQ13459 2157 aa18.5■□□□□ 0.55
CD40-207ENST00000620709 CHD9Q3L8U1 2897 aa18.49■□□□□ 0.55
CD40-207ENST00000620709 RGS20O76081 388 aa18.49■□□□□ 0.55
CD40-207ENST00000620709 DDAH1O94760 285 aa18.49■□□□□ 0.55
CD40-207ENST00000620709 MYOGP15173 224 aa18.49■□□□□ 0.55
CD40-207ENST00000620709 RFC2P35250 354 aa18.49■□□□□ 0.55
CD40-207ENST00000620709 EXOSC10Q01780 885 aaKnown RBP18.49■□□□□ 0.55
CD40-207ENST00000620709 COL9A3Q14050 684 aaPredicted RBP18.49■□□□□ 0.55
CD40-207ENST00000620709 TOB2Q14106 344 aaPredicted RBP18.49■□□□□ 0.55
CD40-207ENST00000620709 MFSD10Q14728 455 aa18.49■□□□□ 0.55
CD40-207ENST00000620709 KIAA0753Q2KHM9 967 aa18.49■□□□□ 0.55
CD40-207ENST00000620709 KCNV1Q6PIU1 500 aa18.49■□□□□ 0.55
CD40-207ENST00000620709 CMTR1Q8N1G2 835 aaKnown RBP18.49■□□□□ 0.55
CD40-207ENST00000620709 PPTC7Q8NI37 304 aa18.49■□□□□ 0.55
CD40-207ENST00000620709 GPKOWQ92917 476 aaPredicted RBP eCLIP18.49■□□□□ 0.55
CD40-207ENST00000620709 VWCEQ96DN2 955 aa18.49■□□□□ 0.55
CD40-207ENST00000620709 KATNAL1Q9BW62 490 aa18.49■□□□□ 0.55
CD40-207ENST00000620709 LRRC2Q9BYS8 371 aa18.49■□□□□ 0.55
CD40-207ENST00000620709 TRIP12Q14669 1992 aaPredicted RBP18.49■□□□□ 0.55
CD40-207ENST00000620709 CUL9Q8IWT3 2517 aa18.49■□□□□ 0.55
CD40-207ENST00000620709 PITPNM1O00562 1244 aa18.49■□□□□ 0.55
CD40-207ENST00000620709 IGFBP4P22692 258 aa18.49■□□□□ 0.55
CD40-207ENST00000620709 FGD1P98174 961 aa18.49■□□□□ 0.55
CD40-207ENST00000620709 CELF3Q5SZQ8 465 aaKnown RBP18.49■□□□□ 0.55
CD40-207ENST00000620709 MYSM1Q5VVJ2 828 aa18.49■□□□□ 0.55
CD40-207ENST00000620709 Q6ZUG5 572 aa18.49■□□□□ 0.55
CD40-207ENST00000620709 SMARCC2Q8TAQ2 1214 aa18.49■□□□□ 0.55
CD40-207ENST00000620709 CUL5Q93034 780 aa18.49■□□□□ 0.55
CD40-207ENST00000620709 EMID1Q96A84 441 aaPredicted RBP18.49■□□□□ 0.55
CD40-207ENST00000620709 INTS4Q96HW7 963 aaKnown RBP18.49■□□□□ 0.55
CD40-207ENST00000620709 FOXD4L1Q9NU39 408 aa18.49■□□□□ 0.55
CD40-207ENST00000620709 RTEL1Q9NZ71 1219 aa18.49■□□□□ 0.55
CD40-207ENST00000620709 SH2B2O14492 632 aaPredicted RBP18.48■□□□□ 0.55
CD40-207ENST00000620709 PLEKHA8P1O95397 391 aa18.48■□□□□ 0.55
CD40-207ENST00000620709 UBA1P22314 1058 aaKnown RBP18.48■□□□□ 0.55
CD40-207ENST00000620709 SP2Q02086 613 aa18.48■□□□□ 0.55
CD40-207ENST00000620709 PPP2R2DQ66LE6 453 aa18.48■□□□□ 0.55
CD40-207ENST00000620709 TMEM87BQ96K49 555 aa18.48■□□□□ 0.55
CD40-207ENST00000620709 COL25A1Q9BXS0 654 aaPredicted RBP18.48■□□□□ 0.55
CD40-207ENST00000620709 CHMP5Q9NZZ3 219 aa18.48■□□□□ 0.55
CD40-207ENST00000620709 GTF2IRD1Q9UHL9 959 aa18.48■□□□□ 0.55
CD40-207ENST00000620709 CIZ1Q9ULV3 898 aaPredicted RBP18.48■□□□□ 0.55
CD40-207ENST00000620709 DDIT3P35638 169 aa18.47■□□□□ 0.55
CD40-207ENST00000620709 HSDL1Q3SXM5 330 aa18.47■□□□□ 0.55
CD40-207ENST00000620709 GNPTABQ3T906 1256 aa18.47■□□□□ 0.55
CD40-207ENST00000620709 SESTD1Q86VW0 696 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms