RNA–Protein interactions for RNA: ENST00000619485.4

TP53-225, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,506 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-225ENST00000619485 CCNE1P24864 410 aa11.47□□□□□ -0.57
TP53-225ENST00000619485 EIF4A3P38919 411 aaKnown RBP11.47□□□□□ -0.57
TP53-225ENST00000619485 CDK8P49336 464 aa11.47□□□□□ -0.57
TP53-225ENST00000619485 KIF11P52732 1056 aa11.47□□□□□ -0.57
TP53-225ENST00000619485 NAPAP54920 295 aa11.47□□□□□ -0.57
TP53-225ENST00000619485 RNASE9P60153 205 aaKnown RBP11.47□□□□□ -0.57
TP53-225ENST00000619485 GNGT1P63211 74 aa11.47□□□□□ -0.57
TP53-225ENST00000619485 SBK1Q52WX2 424 aa11.47□□□□□ -0.57
TP53-225ENST00000619485 KCTD16Q68DU8 428 aa11.47□□□□□ -0.57
TP53-225ENST00000619485 FAM114A1Q8IWE2 563 aa11.47□□□□□ -0.57
TP53-225ENST00000619485 LRRC47Q8N1G4 583 aaKnown RBP11.47□□□□□ -0.57
TP53-225ENST00000619485 TRIM58Q8NG06 486 aa11.47□□□□□ -0.57
TP53-225ENST00000619485 DHTKD1Q96HY7 919 aaPredicted RBP11.47□□□□□ -0.57
TP53-225ENST00000619485 TMEM47Q9BQJ4 181 aa11.47□□□□□ -0.57
TP53-225ENST00000619485 TRIM9Q9C026 710 aa11.47□□□□□ -0.57
TP53-225ENST00000619485 ARPP21Q9UBL0 812 aaPredicted RBP11.47□□□□□ -0.57
TP53-225ENST00000619485 MAD2L2Q9UI95 211 aa11.47□□□□□ -0.57
TP53-225ENST00000619485 ATP6V0A2Q9Y487 856 aa11.47□□□□□ -0.57
TP53-225ENST00000619485 PCDHA13Q9Y5I0 950 aa11.47□□□□□ -0.57
TP53-225ENST00000619485 FRMPD2Q68DX3 1309 aaPredicted RBP11.47□□□□□ -0.57
TP53-225ENST00000619485 GPR75-ASB3A0A0A6YYF3 556 aa11.47□□□□□ -0.57
TP53-225ENST00000619485 PCP11498 1178 aaKnown RBP11.47□□□□□ -0.57
TP53-225ENST00000619485 TXKP42681 527 aa11.47□□□□□ -0.57
TP53-225ENST00000619485 TDRD12Q587J7 1177 aaKnown RBP11.47□□□□□ -0.57
TP53-225ENST00000619485 MIIPQ5JXC2 388 aa11.47□□□□□ -0.57
TP53-225ENST00000619485 TMC4Q7Z404 712 aa11.47□□□□□ -0.57
TP53-225ENST00000619485 CREG2Q8IUH2 290 aa11.47□□□□□ -0.57
TP53-225ENST00000619485 SPATA4Q8NEY3 305 aa11.47□□□□□ -0.57
TP53-225ENST00000619485 BCAS4Q8TDM0 211 aa11.47□□□□□ -0.57
TP53-225ENST00000619485 PPM1EQ8WY54 764 aa11.47□□□□□ -0.57
TP53-225ENST00000619485 ALS2CR12Q96Q35 445 aa11.47□□□□□ -0.57
TP53-225ENST00000619485 TSGA10Q9BZW7 698 aa11.47□□□□□ -0.57
TP53-225ENST00000619485 UBA5Q9GZZ9 404 aa11.47□□□□□ -0.57
TP53-225ENST00000619485 JRKLQ9Y4A0 524 aa11.47□□□□□ -0.57
TP53-225ENST00000619485 SAMM50Q9Y512 469 aa11.47□□□□□ -0.57
TP53-225ENST00000619485 ZC3H4Q9UPT8 1303 aaKnown RBP11.47□□□□□ -0.57
TP53-225ENST00000619485 LOC102724159A0A0B4J2E5 919 aa11.46□□□□□ -0.57
TP53-225ENST00000619485 ANO9A1A5B4 782 aa11.46□□□□□ -0.57
TP53-225ENST00000619485 BBOX1O75936 387 aa11.46□□□□□ -0.57
TP53-225ENST00000619485 AKR1B1P15121 316 aa11.46□□□□□ -0.57
TP53-225ENST00000619485 LIG3P49916 1009 aa11.46□□□□□ -0.57
TP53-225ENST00000619485 CORO7P57737 925 aa11.46□□□□□ -0.57
TP53-225ENST00000619485 RASSF7Q02833 373 aa11.46□□□□□ -0.57
TP53-225ENST00000619485 GFPT1Q06210 699 aaPredicted RBP11.46□□□□□ -0.57
TP53-225ENST00000619485 TCP10Q12799 353 aa11.46□□□□□ -0.57
TP53-225ENST00000619485 PWP2Q15269 919 aaKnown RBP11.46□□□□□ -0.57
TP53-225ENST00000619485 KIAA0825Q8IV33 1275 aa11.46□□□□□ -0.57
TP53-225ENST00000619485 CCDC155Q8N6L0 562 aa11.46□□□□□ -0.57
TP53-225ENST00000619485 NOC3LQ8WTT2 800 aaKnown RBP11.46□□□□□ -0.57
TP53-225ENST00000619485 IFT81Q8WYA0 676 aa11.46□□□□□ -0.57
TP53-225ENST00000619485 CEP95Q96GE4 821 aa11.46□□□□□ -0.57
TP53-225ENST00000619485 MS4A14Q96JA4 679 aa11.46□□□□□ -0.57
TP53-225ENST00000619485 CRAMP1Q96RY5 1269 aa11.46□□□□□ -0.57
TP53-225ENST00000619485 OSBPL9Q96SU4 736 aa11.46□□□□□ -0.57
TP53-225ENST00000619485 CAPS2Q9BXY5 557 aa11.46□□□□□ -0.57
TP53-225ENST00000619485 RYDENQ9NUL5 291 aaKnown RBP11.46□□□□□ -0.57
TP53-225ENST00000619485 ARHGAP20Q9P2F6 1191 aa11.46□□□□□ -0.57
TP53-225ENST00000619485 ESYT3A0FGR9 886 aa11.46□□□□□ -0.58
TP53-225ENST00000619485 LRRC53A6NM62 1247 aa11.46□□□□□ -0.58
TP53-225ENST00000619485 OR52Z1P0C646 297 aa11.46□□□□□ -0.58
TP53-225ENST00000619485 ATP1A2P50993 1020 aa11.46□□□□□ -0.58
TP53-225ENST00000619485 ARID5AQ03989 594 aa11.46□□□□□ -0.58
TP53-225ENST00000619485 CACNA2D4Q7Z3S7 1137 aa11.46□□□□□ -0.58
TP53-225ENST00000619485 RETREG2Q8NC44 543 aa11.46□□□□□ -0.58
TP53-225ENST00000619485 SH2D4AQ9H788 454 aa11.46□□□□□ -0.58
TP53-225ENST00000619485 USP17L5A8MUK1 530 aa11.45□□□□□ -0.58
TP53-225ENST00000619485 ZEB2O60315 1214 aa11.45□□□□□ -0.58
TP53-225ENST00000619485 PAFAH1B1P43034 410 aa11.45□□□□□ -0.58
TP53-225ENST00000619485 IRAK1P51617 712 aa11.45□□□□□ -0.58
TP53-225ENST00000619485 PPP4CP60510 307 aa11.45□□□□□ -0.58
TP53-225ENST00000619485 SPTY2D1Q68D10 685 aaPredicted RBP11.45□□□□□ -0.58
TP53-225ENST00000619485 C8orf74Q6P047 294 aa11.45□□□□□ -0.58
TP53-225ENST00000619485 DPP8Q6V1X1 898 aaPredicted RBP11.45□□□□□ -0.58
TP53-225ENST00000619485 C15orf52Q6ZUT6 534 aaKnown RBP11.45□□□□□ -0.58
TP53-225ENST00000619485 SP8Q8IXZ3 490 aa11.45□□□□□ -0.58
TP53-225ENST00000619485 SH2D3CQ8N5H7 860 aa11.45□□□□□ -0.58
TP53-225ENST00000619485 KIAA0895Q8NCT3 520 aa11.45□□□□□ -0.58
TP53-225ENST00000619485 CDK5RAP3Q96JB5 506 aa11.45□□□□□ -0.58
TP53-225ENST00000619485 CCSER1Q9C0I3 900 aa11.45□□□□□ -0.58
TP53-225ENST00000619485 SEMA6BQ9H3T3 888 aa11.45□□□□□ -0.58
TP53-225ENST00000619485 NLRC4Q9NPP4 1024 aa11.45□□□□□ -0.58
TP53-225ENST00000619485 PCNTO95613 3336 aa11.45□□□□□ -0.58
TP53-225ENST00000619485 STXBP3O00186 592 aa11.45□□□□□ -0.58
TP53-225ENST00000619485 EBAG9O00559 213 aa11.45□□□□□ -0.58
TP53-225ENST00000619485 MAGEA1P43355 309 aa11.45□□□□□ -0.58
TP53-225ENST00000619485 NOP2P46087 812 aaKnown RBP11.45□□□□□ -0.58
TP53-225ENST00000619485 GTF2A1P52655 376 aaPredicted RBP11.45□□□□□ -0.58
TP53-225ENST00000619485 LRRC41Q15345 812 aa11.45□□□□□ -0.58
TP53-225ENST00000619485 KCTD19Q17RG1 926 aaPredicted RBP11.45□□□□□ -0.58
TP53-225ENST00000619485 VWA3BQ502W6 1294 aa11.45□□□□□ -0.58
TP53-225ENST00000619485 CNNM4Q6P4Q7 775 aa11.45□□□□□ -0.58
TP53-225ENST00000619485 ZNF444Q8N0Y2 327 aaPredicted RBP11.45□□□□□ -0.58
TP53-225ENST00000619485 AENQ8WTP8 325 aaKnown RBP11.45□□□□□ -0.58
TP53-225ENST00000619485 EYA3Q99504 573 aa11.45□□□□□ -0.58
TP53-225ENST00000619485 NDST4Q9H3R1 872 aa11.45□□□□□ -0.58
TP53-225ENST00000619485 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.45□□□□□ -0.58
TP53-225ENST00000619485 BIN2Q9UBW5 565 aaPredicted RBP11.45□□□□□ -0.58
TP53-225ENST00000619485 COL4A5P29400 1685 aa11.45□□□□□ -0.58
TP53-225ENST00000619485 SHTN1A0MZ66 631 aa11.44□□□□□ -0.58
TP53-225ENST00000619485 SMCO2A6NFE2 343 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms