RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 ZBTB5O15062 677 aa24.39■■□□□ 1.49
SGMS1-210ENST00000619438 PKN1Q16512 942 aa24.39■■□□□ 1.49
SGMS1-210ENST00000619438 TMTC3Q6ZXV5 915 aa24.39■■□□□ 1.49
SGMS1-210ENST00000619438 ARMCX2Q7L311 632 aa24.39■■□□□ 1.49
SGMS1-210ENST00000619438 PLA2G4DQ86XP0 818 aa24.39■■□□□ 1.49
SGMS1-210ENST00000619438 ABHD16BQ9H3Z7 469 aa24.39■■□□□ 1.49
SGMS1-210ENST00000619438 DNAH12Q6ZR08 3092 aa24.39■■□□□ 1.49
SGMS1-210ENST00000619438 GNAQP50148 359 aa24.38■■□□□ 1.49
SGMS1-210ENST00000619438 PLCB2Q00722 1185 aa24.38■■□□□ 1.49
SGMS1-210ENST00000619438 ACVR2BQ13705 512 aa24.38■■□□□ 1.49
SGMS1-210ENST00000619438 MCF2L2Q86YR7 1114 aa24.38■■□□□ 1.49
SGMS1-210ENST00000619438 ELOA2Q8IYF1 753 aaPredicted RBP24.38■■□□□ 1.49
SGMS1-210ENST00000619438 DIS3LQ8TF46 1054 aaKnown RBP24.38■■□□□ 1.49
SGMS1-210ENST00000619438 PIBF1Q8WXW3 757 aa24.38■■□□□ 1.49
SGMS1-210ENST00000619438 FGD4Q96M96 766 aa24.38■■□□□ 1.49
SGMS1-210ENST00000619438 PURBQ96QR8 312 aaKnown RBP24.38■■□□□ 1.49
SGMS1-210ENST00000619438 BPIFA3Q9BQP9 254 aa24.38■■□□□ 1.49
SGMS1-210ENST00000619438 NAT10Q9H0A0 1025 aaKnown RBP24.38■■□□□ 1.49
SGMS1-210ENST00000619438 RIOX1Q9H6W3 641 aa24.38■■□□□ 1.49
SGMS1-210ENST00000619438 KCNJ14Q9UNX9 436 aa24.38■■□□□ 1.49
SGMS1-210ENST00000619438 ZNF865P0CJ78 1059 aaPredicted RBP24.37■■□□□ 1.49
SGMS1-210ENST00000619438 RARBP10826 455 aa24.37■■□□□ 1.49
SGMS1-210ENST00000619438 AKR1A1P14550 325 aa24.37■■□□□ 1.49
SGMS1-210ENST00000619438 MARCKSP29966 332 aaPredicted RBP24.37■■□□□ 1.49
SGMS1-210ENST00000619438 TOB1P50616 345 aaPredicted RBP24.37■■□□□ 1.49
SGMS1-210ENST00000619438 RPS6P62753 249 aaKnown RBP24.37■■□□□ 1.49
SGMS1-210ENST00000619438 TRAF1Q13077 416 aa24.37■■□□□ 1.49
SGMS1-210ENST00000619438 SHC4Q6S5L8 630 aa24.37■■□□□ 1.49
SGMS1-210ENST00000619438 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.37■■□□□ 1.49
SGMS1-210ENST00000619438 C11orf57Q6ZUT1 292 aaPredicted RBP24.37■■□□□ 1.49
SGMS1-210ENST00000619438 CEP57L1Q8IYX8 460 aa24.37■■□□□ 1.49
SGMS1-210ENST00000619438 ARRDC4Q8NCT1 418 aa24.37■■□□□ 1.49
SGMS1-210ENST00000619438 PIGSQ96S52 555 aa24.37■■□□□ 1.49
SGMS1-210ENST00000619438 FAM184BQ9ULE4 1060 aa24.37■■□□□ 1.49
SGMS1-210ENST00000619438 PCDHA1Q9Y5I3 950 aa24.37■■□□□ 1.49
SGMS1-210ENST00000619438 CDC25BP30305 580 aa24.37■■□□□ 1.49
SGMS1-210ENST00000619438 LZTS2Q9BRK4 669 aa24.37■■□□□ 1.49
SGMS1-210ENST00000619438 PHF20Q9BVI0 1012 aa24.37■■□□□ 1.49
SGMS1-210ENST00000619438 GOLGA6L19H0YKK7 550 aa24.36■■□□□ 1.49
SGMS1-210ENST00000619438 SYKP43405 635 aa24.36■■□□□ 1.49
SGMS1-210ENST00000619438 ZNF75DP51815 510 aa24.36■■□□□ 1.49
SGMS1-210ENST00000619438 SLC30A10Q6XR72 485 aa24.36■■□□□ 1.49
SGMS1-210ENST00000619438 CMTR1Q8N1G2 835 aaKnown RBP24.36■■□□□ 1.49
SGMS1-210ENST00000619438 CCDC82Q8N4S0 544 aa24.36■■□□□ 1.49
SGMS1-210ENST00000619438 KRI1Q8N9T8 703 aaKnown RBP24.36■■□□□ 1.49
SGMS1-210ENST00000619438 MTMR8Q96EF0 704 aa24.36■■□□□ 1.49
SGMS1-210ENST00000619438 C11orf49Q9H6J7 331 aa24.36■■□□□ 1.49
SGMS1-210ENST00000619438 SMCHD1A6NHR9 2005 aa24.36■■□□□ 1.49
SGMS1-210ENST00000619438 CEP290O15078 2479 aa24.35■■□□□ 1.49
SGMS1-210ENST00000619438 PNMA6FA0A0J9YX94 578 aa24.35■■□□□ 1.49
SGMS1-210ENST00000619438 CYTH3O43739 400 aa24.35■■□□□ 1.49
SGMS1-210ENST00000619438 PRPF38BQ5VTL8 546 aaKnown RBP24.35■■□□□ 1.49
SGMS1-210ENST00000619438 ZNF579Q8NAF0 562 aaKnown RBP24.35■■□□□ 1.49
SGMS1-210ENST00000619438 MPHOSPH6Q99547 160 aaKnown RBP24.35■■□□□ 1.49
SGMS1-210ENST00000619438 CEP131Q9UPN4 1083 aa24.35■■□□□ 1.49
SGMS1-210ENST00000619438 EEPD1Q7L9B9 569 aa24.34■■□□□ 1.49
SGMS1-210ENST00000619438 TBC1D5Q92609 795 aa24.34■■□□□ 1.49
SGMS1-210ENST00000619438 RRP36Q96EU6 259 aaKnown RBP24.34■■□□□ 1.49
SGMS1-210ENST00000619438 XPNPEP3Q9NQH7 507 aa24.34■■□□□ 1.49
SGMS1-210ENST00000619438 CNTNAP5Q8WYK1 1306 aa24.34■■□□□ 1.49
SGMS1-210ENST00000619438 PLEKHA8P1O95397 391 aa24.34■■□□□ 1.49
SGMS1-210ENST00000619438 CFBP00751 764 aa24.34■■□□□ 1.49
SGMS1-210ENST00000619438 SLC35G1Q2M3R5 365 aa24.34■■□□□ 1.49
SGMS1-210ENST00000619438 CCDC144BQ3MJ40 725 aa24.34■■□□□ 1.49
SGMS1-210ENST00000619438 GJC2Q5T442 439 aaPredicted RBP24.34■■□□□ 1.49
SGMS1-210ENST00000619438 DHX40Q8IX18 779 aaKnown RBP24.34■■□□□ 1.49
SGMS1-210ENST00000619438 SEC63Q9UGP8 760 aaKnown RBP24.34■■□□□ 1.49
SGMS1-210ENST00000619438 B4DLN1 442 aa24.33■■□□□ 1.49
SGMS1-210ENST00000619438 SMARCA1P28370 1054 aa24.33■■□□□ 1.49
SGMS1-210ENST00000619438 MNX1P50219 401 aaPredicted RBP24.33■■□□□ 1.49
SGMS1-210ENST00000619438 ALDH5A1P51649 535 aaPredicted RBP24.33■■□□□ 1.49
SGMS1-210ENST00000619438 MRPL12P52815 198 aaKnown RBP24.33■■□□□ 1.49
SGMS1-210ENST00000619438 SPZ1Q9BXG8 430 aa24.33■■□□□ 1.49
SGMS1-210ENST00000619438 TRIM5Q9C035 493 aa24.33■■□□□ 1.49
SGMS1-210ENST00000619438 MAF1Q9H063 256 aa24.33■■□□□ 1.49
SGMS1-210ENST00000619438 TUBE1Q9UJT0 475 aa24.33■■□□□ 1.49
SGMS1-210ENST00000619438 V9GY48 417 aaPredicted RBP24.33■■□□□ 1.49
SGMS1-210ENST00000619438 KBTBD13C9JR72 458 aa24.32■■□□□ 1.48
SGMS1-210ENST00000619438 PPP1R11O60927 126 aaPredicted RBP24.32■■□□□ 1.48
SGMS1-210ENST00000619438 KRT2P35908 639 aa24.32■■□□□ 1.48
SGMS1-210ENST00000619438 NLRP12P59046 1061 aa24.32■■□□□ 1.48
SGMS1-210ENST00000619438 NR5A1Q13285 461 aa24.32■■□□□ 1.48
SGMS1-210ENST00000619438 SRBD1Q8N5C6 995 aaKnown RBP24.32■■□□□ 1.48
SGMS1-210ENST00000619438 DNERQ8NFT8 737 aa24.32■■□□□ 1.48
SGMS1-210ENST00000619438 SENP6Q9GZR1 1112 aaPredicted RBP24.32■■□□□ 1.48
SGMS1-210ENST00000619438 FBXO2Q9UK22 296 aaPredicted RBP24.32■■□□□ 1.48
SGMS1-210ENST00000619438 ASTN1O14525 1302 aa24.32■■□□□ 1.48
SGMS1-210ENST00000619438 BECN2A8MW95 431 aa24.31■■□□□ 1.48
SGMS1-210ENST00000619438 DNM1LO00429 736 aa24.31■■□□□ 1.48
SGMS1-210ENST00000619438 PGK1P00558 417 aa24.31■■□□□ 1.48
SGMS1-210ENST00000619438 ZRSR1Q15695 479 aaKnown RBP24.31■■□□□ 1.48
SGMS1-210ENST00000619438 RNF180Q86T96 592 aa24.31■■□□□ 1.48
SGMS1-210ENST00000619438 MRFAP1L1Q96HT8 127 aa24.31■■□□□ 1.48
SGMS1-210ENST00000619438 ALPK3Q96L96 1907 aa24.31■■□□□ 1.48
SGMS1-210ENST00000619438 BMP15O95972 392 aa24.3■■□□□ 1.48
SGMS1-210ENST00000619438 TERF1P54274 439 aa24.3■■□□□ 1.48
SGMS1-210ENST00000619438 PDE4DQ08499 809 aa24.3■■□□□ 1.48
SGMS1-210ENST00000619438 OXER1Q8TDS5 423 aa24.3■■□□□ 1.48
SGMS1-210ENST00000619438 TTC12Q9H892 705 aaPredicted RBP24.3■■□□□ 1.48
SGMS1-210ENST00000619438 BRMS1Q9HCU9 246 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms