RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-213ENST00000619396 IDEP14735 1019 aa33.33■■■□□ 2.93
KHSRP-213ENST00000619396 EHHADHQ08426 723 aa33.33■■■□□ 2.93
KHSRP-213ENST00000619396 DYMQ7RTS9 669 aa33.33■■■□□ 2.93
KHSRP-213ENST00000619396 GREB1LQ9C091 1923 aaPredicted RBP33.33■■■□□ 2.93
KHSRP-213ENST00000619396 USP17L10C9JJH3 530 aa33.33■■■□□ 2.93
KHSRP-213ENST00000619396 DACT2Q5SW24 774 aa33.33■■■□□ 2.93
KHSRP-213ENST00000619396 ACBD3Q9H3P7 528 aa33.33■■■□□ 2.93
KHSRP-213ENST00000619396 MED4Q9NPJ6 270 aa33.33■■■□□ 2.93
KHSRP-213ENST00000619396 FAM198AQ9UFP1 575 aa33.33■■■□□ 2.93
KHSRP-213ENST00000619396 TULP2O00295 520 aa33.32■■■□□ 2.92
KHSRP-213ENST00000619396 AARSP49588 968 aaKnown RBP eCLIP33.32■■■□□ 2.92
KHSRP-213ENST00000619396 TMEM266Q2M3C6 531 aa33.32■■■□□ 2.92
KHSRP-213ENST00000619396 SH3BP5LQ7L8J4 393 aa33.32■■■□□ 2.92
KHSRP-213ENST00000619396 CCDC102AQ96A19 550 aa33.32■■■□□ 2.92
KHSRP-213ENST00000619396 PCDHA13Q9Y5I0 950 aa33.32■■■□□ 2.92
KHSRP-213ENST00000619396 H0YIN7 160 aa33.32■■■□□ 2.92
KHSRP-213ENST00000619396 TMEM119Q4V9L6 283 aa33.32■■■□□ 2.92
KHSRP-213ENST00000619396 LRRC55Q6ZSA7 311 aa33.32■■■□□ 2.92
KHSRP-213ENST00000619396 GOLGA5Q8TBA6 731 aa33.32■■■□□ 2.92
KHSRP-213ENST00000619396 POTEMA6NI47 508 aa33.31■■■□□ 2.92
KHSRP-213ENST00000619396 LRRC63Q05C16 580 aa33.31■■■□□ 2.92
KHSRP-213ENST00000619396 MAP9Q49MG5 647 aa33.31■■■□□ 2.92
KHSRP-213ENST00000619396 HSP90B2PQ58FF3 399 aa33.31■■■□□ 2.92
KHSRP-213ENST00000619396 CDK5RAP3Q96JB5 506 aa33.31■■■□□ 2.92
KHSRP-213ENST00000619396 SH2D4AQ9H788 454 aa33.31■■■□□ 2.92
KHSRP-213ENST00000619396 FAM207AQ9NSI2 230 aaPredicted RBP33.31■■■□□ 2.92
KHSRP-213ENST00000619396 MYO3BQ8WXR4 1341 aa33.31■■■□□ 2.92
KHSRP-213ENST00000619396 PNMA6FA0A0J9YX94 578 aa33.3■■■□□ 2.92
KHSRP-213ENST00000619396 FGFR1OPO95684 399 aaKnown RBP33.3■■■□□ 2.92
KHSRP-213ENST00000619396 HMGB2P26583 209 aaKnown RBP33.3■■■□□ 2.92
KHSRP-213ENST00000619396 KCNK18Q7Z418 384 aa33.3■■■□□ 2.92
KHSRP-213ENST00000619396 SMCR8Q8TEV9 937 aaPredicted RBP33.3■■■□□ 2.92
KHSRP-213ENST00000619396 SNX12Q9UMY4 172 aa33.3■■■□□ 2.92
KHSRP-213ENST00000619396 JRKLQ9Y4A0 524 aa33.3■■■□□ 2.92
KHSRP-213ENST00000619396 HOXA7P31268 230 aaPredicted RBP33.3■■■□□ 2.92
KHSRP-213ENST00000619396 ACTN2P35609 894 aa33.3■■■□□ 2.92
KHSRP-213ENST00000619396 AOC3Q16853 763 aa33.3■■■□□ 2.92
KHSRP-213ENST00000619396 CCDC84Q86UT8 332 aaPredicted RBP33.3■■■□□ 2.92
KHSRP-213ENST00000619396 TRIM58Q8NG06 486 aa33.3■■■□□ 2.92
KHSRP-213ENST00000619396 IFIH1Q9BYX4 1025 aaKnown RBP33.3■■■□□ 2.92
KHSRP-213ENST00000619396 JADE2Q9NQC1 790 aa33.3■■■□□ 2.92
KHSRP-213ENST00000619396 ZC3H4Q9UPT8 1303 aaKnown RBP33.29■■■□□ 2.92
KHSRP-213ENST00000619396 USO1O60763 962 aaKnown RBP33.29■■■□□ 2.92
KHSRP-213ENST00000619396 EIF4A3P38919 411 aaKnown RBP33.29■■■□□ 2.92
KHSRP-213ENST00000619396 TNNI2P48788 182 aa33.29■■■□□ 2.92
KHSRP-213ENST00000619396 KIF11P52732 1056 aa33.29■■■□□ 2.92
KHSRP-213ENST00000619396 STRIP1Q5VSL9 837 aa33.29■■■□□ 2.92
KHSRP-213ENST00000619396 FOXR2Q6PJQ5 311 aa33.29■■■□□ 2.92
KHSRP-213ENST00000619396 CREG2Q8IUH2 290 aa33.29■■■□□ 2.92
KHSRP-213ENST00000619396 RAB34Q9BZG1 259 aa33.29■■■□□ 2.92
KHSRP-213ENST00000619396 CAGE1Q8TC20 777 aa33.29■■■□□ 2.92
KHSRP-213ENST00000619396 SNX29Q8TEQ0 813 aa33.29■■■□□ 2.92
KHSRP-213ENST00000619396 BAP1Q92560 729 aa33.29■■■□□ 2.92
KHSRP-213ENST00000619396 DDX12PQ92771 950 aa33.29■■■□□ 2.92
KHSRP-213ENST00000619396 MMRN2Q9H8L6 949 aa33.29■■■□□ 2.92
KHSRP-213ENST00000619396 HPCAL4Q9UM19 191 aa33.29■■■□□ 2.92
KHSRP-213ENST00000619396 CAPN6Q9Y6Q1 641 aa33.29■■■□□ 2.92
KHSRP-213ENST00000619396 PSMD2Q13200 908 aa33.28■■■□□ 2.92
KHSRP-213ENST00000619396 GJA10Q969M2 543 aa33.28■■■□□ 2.92
KHSRP-213ENST00000619396 ZNF646O15015 1829 aaPredicted RBP33.28■■■□□ 2.92
KHSRP-213ENST00000619396 SYF2O95926 243 aaKnown RBP33.28■■■□□ 2.92
KHSRP-213ENST00000619396 KRT79Q5XKE5 535 aa33.28■■■□□ 2.92
KHSRP-213ENST00000619396 CCNI2Q6ZMN8 369 aaPredicted RBP33.28■■■□□ 2.92
KHSRP-213ENST00000619396 ZNF572Q7Z3I7 529 aaPredicted RBP33.28■■■□□ 2.92
KHSRP-213ENST00000619396 GLIS3Q8NEA6 775 aa33.28■■■□□ 2.92
KHSRP-213ENST00000619396 EHD4Q9H223 541 aa33.28■■■□□ 2.92
KHSRP-213ENST00000619396 MLXIPQ9HAP2 919 aa33.28■■■□□ 2.92
KHSRP-213ENST00000619396 TACC1O75410 805 aa33.27■■■□□ 2.92
KHSRP-213ENST00000619396 EEF2P13639 858 aaKnown RBP33.27■■■□□ 2.92
KHSRP-213ENST00000619396 PRLRP16471 622 aa33.27■■■□□ 2.92
KHSRP-213ENST00000619396 PPP4R3AQ6IN85 833 aa33.27■■■□□ 2.92
KHSRP-213ENST00000619396 ECM1Q16610 540 aa33.26■■■□□ 2.92
KHSRP-213ENST00000619396 COG1Q8WTW3 980 aa33.26■■■□□ 2.92
KHSRP-213ENST00000619396 LRRC27Q9C0I9 530 aa33.26■■■□□ 2.92
KHSRP-213ENST00000619396 RIC8AQ9NPQ8 531 aa33.26■■■□□ 2.92
KHSRP-213ENST00000619396 LRRC53A6NM62 1247 aa33.26■■■□□ 2.91
KHSRP-213ENST00000619396 ZMYND10O75800 440 aa33.26■■■□□ 2.91
KHSRP-213ENST00000619396 C2orf54Q08AI8 447 aa33.26■■■□□ 2.91
KHSRP-213ENST00000619396 ZNF772Q68DY9 489 aaPredicted RBP33.26■■■□□ 2.91
KHSRP-213ENST00000619396 STYK1Q6J9G0 422 aa33.26■■■□□ 2.91
KHSRP-213ENST00000619396 MMGT1Q8N4V1 131 aa33.26■■■□□ 2.91
KHSRP-213ENST00000619396 UIMC1Q96RL1 719 aa33.26■■■□□ 2.91
KHSRP-213ENST00000619396 PHACTR2O75167 634 aa33.25■■■□□ 2.91
KHSRP-213ENST00000619396 MYBL2P10244 700 aa33.25■■■□□ 2.91
KHSRP-213ENST00000619396 CLK2P49760 499 aaKnown RBP33.25■■■□□ 2.91
KHSRP-213ENST00000619396 RRAGAQ7L523 313 aa33.25■■■□□ 2.91
KHSRP-213ENST00000619396 ITIH3Q06033 890 aa33.25■■■□□ 2.91
KHSRP-213ENST00000619396 LRRC41Q15345 812 aa33.25■■■□□ 2.91
KHSRP-213ENST00000619396 ASTE1Q2TB18 679 aaPredicted RBP33.25■■■□□ 2.91
KHSRP-213ENST00000619396 CERKLQ49MI3 558 aaPredicted RBP33.25■■■□□ 2.91
KHSRP-213ENST00000619396 IQCEQ6IPM2 695 aa33.25■■■□□ 2.91
KHSRP-213ENST00000619396 PPP1R18Q6NYC8 613 aa33.25■■■□□ 2.91
KHSRP-213ENST00000619396 HAS1Q92839 578 aa33.25■■■□□ 2.91
KHSRP-213ENST00000619396 DNAJC19Q96DA6 116 aa33.25■■■□□ 2.91
KHSRP-213ENST00000619396 EDEM3Q9BZQ6 932 aa33.25■■■□□ 2.91
KHSRP-213ENST00000619396 MYH7BA7E2Y1 1941 aa33.24■■■□□ 2.91
KHSRP-213ENST00000619396 ZBTB5O15062 677 aa33.24■■■□□ 2.91
KHSRP-213ENST00000619396 MOCS3O95396 460 aa33.24■■■□□ 2.91
KHSRP-213ENST00000619396 CAPN2P17655 700 aa33.24■■■□□ 2.91
KHSRP-213ENST00000619396 TNNT3P45378 269 aaPredicted RBP33.24■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms