RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 MESDQ14696 234 aa12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 ZNF713Q8N859 430 aaPredicted RBP12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 ORAI2Q96SN7 254 aa12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 EPHB1P54762 984 aa12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 CYP4A11Q02928 519 aa12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 SPATA1Q5VX52 437 aa12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 FOXP1Q9H334 677 aaPredicted RBP12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 HAUS4Q9H6D7 363 aa12.09□□□□□ -0.47
CCDC144B-208ENST00000618081 MYL1P05976 194 aa12.08□□□□□ -0.47
CCDC144B-208ENST00000618081 IFNA8P32881 189 aa12.08□□□□□ -0.47
CCDC144B-208ENST00000618081 ESRRGP62508 458 aa12.08□□□□□ -0.47
CCDC144B-208ENST00000618081 SGO2Q562F6 1265 aa12.08□□□□□ -0.47
CCDC144B-208ENST00000618081 SMAP1Q8IYB5 467 aaPredicted RBP12.08□□□□□ -0.47
CCDC144B-208ENST00000618081 AFPP02771 609 aaKnown RBP12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 GNAT1P11488 350 aa12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 CMA1P23946 247 aa12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 MSH2P43246 934 aa12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 ZNF772Q68DY9 489 aaPredicted RBP12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 ZNF496Q96IT1 587 aaPredicted RBP12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 CROCC2H7BZ55 1655 aa12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 EFCAB8A8MWE9 144 aa12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 TAF11Q15544 211 aa12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 TEX12Q9BXU0 123 aa12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 PCDHA4Q9UN74 947 aa12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 FAM170AA1A519 330 aa12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 ALCAMQ13740 583 aa12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 SPICE1Q8N0Z3 855 aa12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 MAGOHBQ96A72 148 aaKnown RBP12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 TACO1Q9BSH4 297 aaKnown RBP12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 TRIM15Q9C019 465 aa12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 TCOF1Q13428 1488 aaKnown RBP12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 DNAJC24Q6P3W2 148 aa12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 DEPDC1BQ8WUY9 529 aa12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 RIPOR2Q9Y4F9 1068 aa12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 FAM135BQ49AJ0 1406 aa12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 PRPSAP2O60256 369 aa12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 HSPD1P10809 573 aaKnown RBP12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 FBXW4P57775 412 aa12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 FRA10AC1Q70Z53 315 aa12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 GIMAP8Q8ND71 665 aaPredicted RBP12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 FBXL13Q8NEE6 735 aa12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 DHTKD1Q96HY7 919 aaPredicted RBP12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 RPF1Q9H9Y2 349 aaKnown RBP12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 SAMD9Q5K651 1589 aa12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 ZBTB17Q13105 803 aa12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 PDCD7Q8N8D1 485 aaKnown RBP12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 ZNF653Q96CK0 615 aa12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 DPH5Q9H2P9 285 aa12.08□□□□□ -0.48
CCDC144B-208ENST00000618081 PFKFB2O60825 505 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 SOX5P35711 763 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 SEPT2Q15019 361 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 DARS2Q6PI48 645 aaKnown RBP12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 EPN1Q9Y6I3 576 aaPredicted RBP12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 PSAPP07602 524 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 ATP1A2P50993 1020 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 NOP14P78316 857 aaKnown RBP12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 RASSF7Q02833 373 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 ART3Q13508 389 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 RASEFQ8IZ41 740 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 OTUD7AQ8TE49 926 aaPredicted RBP12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 KANSL2Q9H9L4 492 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 ERBB4Q15303 1308 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 EIF4A1P60842 406 aaKnown RBP12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 GNGT1P63211 74 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 RCN2Q14257 317 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 KCTD1Q719H9 257 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 GDAP1L1Q96MZ0 367 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 TUBGCP2Q9BSJ2 902 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 TRPC5Q9UL62 973 aaPredicted RBP12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 NPC1L1Q9UHC9 1359 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 STK25O00506 426 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 PCCAP05165 728 aaPredicted RBP12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 RNF217Q8TC41 542 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 MICAL1Q8TDZ2 1067 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 CCDC138Q96M89 665 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 HPCAL4Q9UM19 191 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 FGAP02671 866 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 GOLGA8HP0CJ92 632 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 THEM5Q8N1Q8 247 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 CEP170P1Q96L14 293 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 GDAP1Q8TB36 358 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 DHX36Q9H2U1 1008 aaKnown RBP12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 SLITRK6Q9H5Y7 841 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 PPP2R2CQ9Y2T4 447 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 CAPN7Q9Y6W3 813 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 GOLGA4Q13439 2230 aaKnown RBP12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 CLTAP09496 248 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 FAM196AQ6ZSG2 479 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 MMTAG2Q9BU76 263 aaKnown RBP12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 CARD14Q9BXL6 1004 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 PARVGQ9HBI0 331 aa12.07□□□□□ -0.48
CCDC144B-208ENST00000618081 GADD45BO75293 160 aaPredicted RBP12.06□□□□□ -0.48
CCDC144B-208ENST00000618081 EHHADHQ08426 723 aa12.06□□□□□ -0.48
CCDC144B-208ENST00000618081 PTPROQ16827 1216 aa12.06□□□□□ -0.48
CCDC144B-208ENST00000618081 FAM173BQ6P4H8 233 aa12.06□□□□□ -0.48
CCDC144B-208ENST00000618081 C7orf31Q8N865 590 aa12.06□□□□□ -0.48
CCDC144B-208ENST00000618081 SCHIP1Q9P0W5 487 aaPredicted RBP12.06□□□□□ -0.48
CCDC144B-208ENST00000618081 MID2Q9UJV3 735 aa12.06□□□□□ -0.48
CCDC144B-208ENST00000618081 FAM186BQ8IYM0 893 aa12.06□□□□□ -0.48
CCDC144B-208ENST00000618081 SERPINI1Q99574 410 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms