RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 ZBTB8BQ8NAP8 495 aaPredicted RBP8.04□□□□□ -1.12
PDE6A-205ENST00000617647 RUBCNQ92622 972 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 CAVIN3Q969G5 261 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 MS4A14Q96JA4 679 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 MTRF1LQ9UGC7 380 aaKnown RBP8.04□□□□□ -1.12
PDE6A-205ENST00000617647 FRMD4BQ9Y2L6 1034 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 NDUFB5O43674 189 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 FTCDO95954 541 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 KRT16P08779 473 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 NAT1P18440 290 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 PEX5P50542 639 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 CLCN2P51788 898 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 LBRQ14739 615 aaKnown RBP8.04□□□□□ -1.12
PDE6A-205ENST00000617647 RPS6KA1Q15418 735 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 INAQ16352 499 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 OTUD6AQ7L8S5 288 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 METTL16Q86W50 562 aaKnown RBP8.04□□□□□ -1.12
PDE6A-205ENST00000617647 WASF1Q92558 559 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 EEF2KMTQ96G04 330 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 SPZ1Q9BXG8 430 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 FAM192AQ9GZU8 254 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 BLZF1Q9H2G9 400 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 MRGBPQ9NV56 204 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 INTS13Q9NVM9 706 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 CABP1Q9NZU7 370 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 BTBD7Q9P203 1132 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 TUBE1Q9UJT0 475 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 IQSEC3Q9UPP2 1182 aaPredicted RBP8.04□□□□□ -1.12
PDE6A-205ENST00000617647 LRCH1Q9Y2L9 728 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 PPRC1Q5VV67 1664 aaKnown RBP8.04□□□□□ -1.12
PDE6A-205ENST00000617647 ZSCAN5CA6NGD5 496 aaPredicted RBP8.04□□□□□ -1.12
PDE6A-205ENST00000617647 PDE2AO00408 941 aaPredicted RBP8.04□□□□□ -1.12
PDE6A-205ENST00000617647 FGFR1OPO95684 399 aaKnown RBP8.04□□□□□ -1.12
PDE6A-205ENST00000617647 RCN1Q15293 331 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 ZCWPW2Q504Y3 356 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 PAPD7Q5XG87 772 aaKnown RBP8.04□□□□□ -1.12
PDE6A-205ENST00000617647 ANO7Q6IWH7 933 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 DDX50Q9BQ39 737 aaKnown RBP8.04□□□□□ -1.12
PDE6A-205ENST00000617647 SYT15Q9BQS2 421 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 ARHGEF10LQ9HCE6 1279 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 ARHGEF38Q9NXL2 777 aa8.04□□□□□ -1.12
PDE6A-205ENST00000617647 NRXN1Q9ULB1 1477 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 GOLGA8AA7E2F4 631 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 TCP11X1B4DZS4 312 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 SMAPO00193 183 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 KRIT1O00522 736 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 ABLIM1O14639 778 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 PSMA7O14818 248 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 S100BP04271 92 aaPredicted RBP8.03□□□□□ -1.12
PDE6A-205ENST00000617647 ACADSP16219 412 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 CALB2P22676 271 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 HSD17B3P37058 310 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 GNAQP50148 359 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 SSRP1Q08945 709 aaKnown RBP8.03□□□□□ -1.12
PDE6A-205ENST00000617647 KRT40Q6A162 431 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 PPP1R21Q6ZMI0 780 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 NCCRP1Q6ZVX7 275 aaPredicted RBP8.03□□□□□ -1.12
PDE6A-205ENST00000617647 STAG2Q8N3U4 1231 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 EDC3Q96F86 508 aaKnown RBP8.03□□□□□ -1.12
PDE6A-205ENST00000617647 MMTAG2Q9BU76 263 aaKnown RBP8.03□□□□□ -1.12
PDE6A-205ENST00000617647 PALMDQ9NP74 551 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 FGFR1OP2Q9NVK5 253 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 DDX18Q9NVP1 670 aaKnown RBP8.03□□□□□ -1.12
PDE6A-205ENST00000617647 TUBA8Q9NY65 449 aaPredicted RBP8.03□□□□□ -1.12
PDE6A-205ENST00000617647 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.03□□□□□ -1.12
PDE6A-205ENST00000617647 IQSEC2Q5JU85 1478 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 SBNO2Q9Y2G9 1366 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 CCNFP41002 786 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 TMEM62Q0P6H9 643 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 LRIG3Q6UXM1 1119 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 ARHGAP24Q8N264 748 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 CCDC110Q8TBZ0 833 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 AZI2Q9H6S1 392 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 METTL5Q9NRN9 209 aaKnown RBP8.03□□□□□ -1.12
PDE6A-205ENST00000617647 ITM2BQ9Y287 266 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 ARL2BPQ9Y2Y0 163 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 TTC26A0AVF1 554 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 TSPY2A6NKD2 308 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 TSPY3P0CV98 308 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 TSPY8P0CW00 308 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 NFKBIAP25963 317 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 PDIA3P30101 505 aaKnown RBP8.03□□□□□ -1.12
PDE6A-205ENST00000617647 AMPD2Q01433 879 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 TSPY1Q01534 308 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 SPRED3Q2MJR0 410 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 HAUS3Q68CZ6 603 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 THOC7Q6I9Y2 204 aaKnown RBP8.03□□□□□ -1.12
PDE6A-205ENST00000617647 CCDC62Q6P9F0 684 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 RFX8Q6ZV50 586 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 CROCCP2Q86T23 111 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 RBBP8NLQ8NC74 664 aaPredicted RBP8.03□□□□□ -1.12
PDE6A-205ENST00000617647 LENG1Q96BZ8 264 aaPredicted RBP8.03□□□□□ -1.12
PDE6A-205ENST00000617647 L3MBTL3Q96JM7 780 aaPredicted RBP8.03□□□□□ -1.12
PDE6A-205ENST00000617647 NOC4LQ9BVI4 516 aaKnown RBP8.03□□□□□ -1.12
PDE6A-205ENST00000617647 RNPEPL1Q9HAU8 725 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 FAM207AQ9NSI2 230 aaPredicted RBP8.03□□□□□ -1.12
PDE6A-205ENST00000617647 ITGB1BP2Q9UKP3 347 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 ATP10DQ9P241 1426 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 MAP3K19Q56UN5 1328 aa8.03□□□□□ -1.12
PDE6A-205ENST00000617647 IFIT3O14879 490 aaKnown RBP8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms