RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 ATP2B4P23634 1241 aa6.49□□□□□ -1.37
RFX3-212ENST00000617270 HIBCHQ6NVY1 386 aaPredicted RBP6.49□□□□□ -1.37
RFX3-212ENST00000617270 TBC1D1Q86TI0 1168 aaPredicted RBP6.49□□□□□ -1.37
RFX3-212ENST00000617270 SULF1Q8IWU6 871 aa6.49□□□□□ -1.37
RFX3-212ENST00000617270 PI4K2BQ8TCG2 481 aa6.49□□□□□ -1.37
RFX3-212ENST00000617270 TEKT4Q8WW24 435 aa6.49□□□□□ -1.37
RFX3-212ENST00000617270 CHCHD3Q9NX63 227 aaKnown RBP6.49□□□□□ -1.37
RFX3-212ENST00000617270 PDHA1P08559 390 aa6.49□□□□□ -1.37
RFX3-212ENST00000617270 CXCR5P32302 372 aa6.49□□□□□ -1.37
RFX3-212ENST00000617270 TFDP1Q14186 410 aa6.49□□□□□ -1.37
RFX3-212ENST00000617270 KIAA2013Q8IYS2 634 aa6.49□□□□□ -1.37
RFX3-212ENST00000617270 DCAF5Q96JK2 942 aa6.49□□□□□ -1.37
RFX3-212ENST00000617270 USP40Q9NVE5 1235 aa6.49□□□□□ -1.37
RFX3-212ENST00000617270 PGRMC1O00264 195 aaKnown RBP6.48□□□□□ -1.37
RFX3-212ENST00000617270 EFCAB14O75071 495 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 CARSP49589 748 aaKnown RBP6.48□□□□□ -1.37
RFX3-212ENST00000617270 AOC3Q16853 763 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 PPHLN1Q8NEY8 458 aaKnown RBP6.48□□□□□ -1.37
RFX3-212ENST00000617270 ZSCAN10Q96SZ4 725 aaPredicted RBP6.48□□□□□ -1.37
RFX3-212ENST00000617270 SLITRK6Q9H5Y7 841 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 KIAA1468Q9P260 1216 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 SNX5Q9Y5X3 404 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 SUPT6HQ7KZ85 1726 aaKnown RBP6.48□□□□□ -1.37
RFX3-212ENST00000617270 ARAP1Q96P48 1450 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 PRR23D1E9PI22 279 aaPredicted RBP6.48□□□□□ -1.37
RFX3-212ENST00000617270 RASGRF2O14827 1237 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 ACSL3O95573 720 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 FTCDO95954 541 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 PRR23D2P0DMB1 279 aaPredicted RBP6.48□□□□□ -1.37
RFX3-212ENST00000617270 PYGBP11216 843 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 GSPT1P15170 499 aaKnown RBP6.48□□□□□ -1.37
RFX3-212ENST00000617270 KRT4P19013 534 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 CA4P22748 312 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 TFAMQ00059 246 aaKnown RBP6.48□□□□□ -1.37
RFX3-212ENST00000617270 FAM160B1Q5W0V3 765 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 DNAJC24Q6P3W2 148 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 PDXDC1Q6P996 788 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 TMCO5AQ8N6Q1 288 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 TTLL11Q8NHH1 800 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 PCDHA12Q9UN75 941 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 COPG1Q9Y678 874 aaKnown RBP6.48□□□□□ -1.37
RFX3-212ENST00000617270 ANXA13P27216 316 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 MRPS15P82914 257 aaKnown RBP6.48□□□□□ -1.37
RFX3-212ENST00000617270 FAM26FQ5R3K3 315 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 PLA2G4DQ86XP0 818 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 ZNF654Q8IZM8 581 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 CHURC1Q8WUH1 139 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 ANKRD36BP1Q96IX9 119 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 CNOT6LQ96LI5 555 aaKnown RBP6.48□□□□□ -1.37
RFX3-212ENST00000617270 STX18Q9P2W9 335 aaKnown RBP6.48□□□□□ -1.37
RFX3-212ENST00000617270 SLC12A6Q9UHW9 1150 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 CD58P19256 250 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 TRPC1P48995 793 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 BPIFB4P59827 614 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 CACNB1Q02641 598 aaPredicted RBP6.48□□□□□ -1.37
RFX3-212ENST00000617270 MXD4Q14582 209 aaPredicted RBP6.48□□□□□ -1.37
RFX3-212ENST00000617270 MFSD14BQ5SR56 506 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 RWDD4Q6NW29 188 aaKnown RBP6.48□□□□□ -1.37
RFX3-212ENST00000617270 SCARA5Q6ZMJ2 495 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 TEX9Q8N6V9 391 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 BTN2A2Q8WVV5 523 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 USP6NLQ92738 828 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 SLC24A3Q9HC58 644 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 NCOA1Q15788 1441 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 E7EWF7 191 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 H0YIN7 160 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 MRPL28Q13084 256 aaKnown RBP6.48□□□□□ -1.37
RFX3-212ENST00000617270 PPP2R5BQ15173 497 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 HIF1AQ16665 826 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 RGS9BPQ6ZS82 235 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 METTL23Q86XA0 190 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 C7orf31Q8N865 590 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 B4GALNT2Q8NHY0 566 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 SYMPKQ92797 1274 aaKnown RBP6.48□□□□□ -1.37
RFX3-212ENST00000617270 ZNF229Q9UJW7 825 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 TCP10L2B9ZVM9 353 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 PRPSAP2O60256 369 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 NR2F2P24468 414 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 DDIT3P35638 169 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 SLC35F6Q8N357 371 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 TDRD7Q8NHU6 1098 aaKnown RBP6.48□□□□□ -1.37
RFX3-212ENST00000617270 CNOT10Q9H9A5 744 aaKnown RBP6.48□□□□□ -1.37
RFX3-212ENST00000617270 PPARGC1AQ9UBK2 798 aaKnown RBP6.48□□□□□ -1.37
RFX3-212ENST00000617270 ARPP21Q9UBL0 812 aaPredicted RBP6.48□□□□□ -1.37
RFX3-212ENST00000617270 DBNLQ9UJU6 430 aaKnown RBP6.48□□□□□ -1.37
RFX3-212ENST00000617270 EPN1Q9Y6I3 576 aaPredicted RBP6.48□□□□□ -1.37
RFX3-212ENST00000617270 UBN2Q6ZU65 1347 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 PPIP5K2O43314 1243 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 ZAP70P43403 619 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 DEUP1Q05D60 604 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 C1orf228Q6PIY5 440 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 NEK8Q86SG6 692 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 ARHGEF1Q92888 912 aaKnown RBP6.48□□□□□ -1.37
RFX3-212ENST00000617270 TRIM11Q96F44 468 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 YIPF3Q9GZM5 350 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 AS3MTQ9HBK9 375 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 GTSE1Q9NYZ3 720 aa6.48□□□□□ -1.37
RFX3-212ENST00000617270 NFKBIL1Q9UBC1 381 aaPredicted RBP6.48□□□□□ -1.37
RFX3-212ENST00000617270 TSR3Q9UJK0 312 aaKnown RBP6.48□□□□□ -1.37
RFX3-212ENST00000617270 TMEM232C9JQI7 657 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms