RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 EFCC1Q9HA90 598 aa19.25■□□□□ 0.67
ATXN2-227ENST00000616825 COBLO75128 1261 aa19.25■□□□□ 0.67
ATXN2-227ENST00000616825 SASH1O94885 1247 aa19.25■□□□□ 0.67
ATXN2-227ENST00000616825 CAPS2Q9BXY5 557 aa19.25■□□□□ 0.67
ATXN2-227ENST00000616825 CLNS1AP54105 237 aaKnown RBP19.25■□□□□ 0.67
ATXN2-227ENST00000616825 GRAPQ13588 217 aa19.25■□□□□ 0.67
ATXN2-227ENST00000616825 GAS2L3Q86XJ1 694 aa19.25■□□□□ 0.67
ATXN2-227ENST00000616825 GRAPLQ8TC17 118 aaPredicted RBP19.25■□□□□ 0.67
ATXN2-227ENST00000616825 DYNLL2Q96FJ2 89 aa19.25■□□□□ 0.67
ATXN2-227ENST00000616825 MRPL47Q9HD33 250 aaKnown RBP19.25■□□□□ 0.67
ATXN2-227ENST00000616825 STK38LQ9Y2H1 464 aa19.25■□□□□ 0.67
ATXN2-227ENST00000616825 USP6P35125 1406 aa19.25■□□□□ 0.67
ATXN2-227ENST00000616825 GOLGA8SH3BPF8 625 aa19.24■□□□□ 0.67
ATXN2-227ENST00000616825 COA1Q9GZY4 146 aa19.24■□□□□ 0.67
ATXN2-227ENST00000616825 SRPRBQ9Y5M8 271 aaKnown RBP19.24■□□□□ 0.67
ATXN2-227ENST00000616825 EIF3CLB5ME19 914 aaKnown RBP19.24■□□□□ 0.67
ATXN2-227ENST00000616825 MEIS1O00470 390 aa19.24■□□□□ 0.67
ATXN2-227ENST00000616825 ZBED6P86452 979 aa19.24■□□□□ 0.67
ATXN2-227ENST00000616825 TBC1D10BQ4KMP7 808 aaPredicted RBP19.24■□□□□ 0.67
ATXN2-227ENST00000616825 ZNF772Q68DY9 489 aaPredicted RBP19.24■□□□□ 0.67
ATXN2-227ENST00000616825 EIF3CQ99613 913 aaKnown RBP19.24■□□□□ 0.67
ATXN2-227ENST00000616825 NXF1Q9UBU9 619 aaKnown RBP19.24■□□□□ 0.67
ATXN2-227ENST00000616825 JRKLQ9Y4A0 524 aa19.24■□□□□ 0.67
ATXN2-227ENST00000616825 PDXDC2PQ6P474 469 aa19.24■□□□□ 0.67
ATXN2-227ENST00000616825 SNX25Q9H3E2 840 aa19.24■□□□□ 0.67
ATXN2-227ENST00000616825 FAM114A2Q9NRY5 505 aa19.24■□□□□ 0.67
ATXN2-227ENST00000616825 BSDC1Q9NW68 430 aaPredicted RBP19.24■□□□□ 0.67
ATXN2-227ENST00000616825 CYP2D7A0A087X1C5 515 aa19.24■□□□□ 0.67
ATXN2-227ENST00000616825 TYW5A2RUC4 315 aaKnown RBP19.24■□□□□ 0.67
ATXN2-227ENST00000616825 ENC1O14682 589 aa19.24■□□□□ 0.67
ATXN2-227ENST00000616825 RXRBP28702 533 aa19.24■□□□□ 0.67
ATXN2-227ENST00000616825 PSMD2Q13200 908 aa19.24■□□□□ 0.67
ATXN2-227ENST00000616825 C7orf31Q8N865 590 aa19.24■□□□□ 0.67
ATXN2-227ENST00000616825 LRRC8CQ8TDW0 803 aa19.24■□□□□ 0.67
ATXN2-227ENST00000616825 BAG5Q9UL15 447 aa19.24■□□□□ 0.67
ATXN2-227ENST00000616825 POC1B-GALNT4F8VUJ3 575 aa19.23■□□□□ 0.67
ATXN2-227ENST00000616825 PRPSAP1Q14558 356 aa19.23■□□□□ 0.67
ATXN2-227ENST00000616825 PCIF1Q9H4Z3 704 aa19.23■□□□□ 0.67
ATXN2-227ENST00000616825 USP17L3A6NCW0 530 aa19.23■□□□□ 0.67
ATXN2-227ENST00000616825 USP17L4A6NCW7 530 aa19.23■□□□□ 0.67
ATXN2-227ENST00000616825 ASNSP08243 561 aa19.23■□□□□ 0.67
ATXN2-227ENST00000616825 MECOMQ03112 1051 aa19.23■□□□□ 0.67
ATXN2-227ENST00000616825 ARL6IP4Q66PJ3 421 aaKnown RBP19.23■□□□□ 0.67
ATXN2-227ENST00000616825 USP17L1Q7RTZ2 530 aa19.23■□□□□ 0.67
ATXN2-227ENST00000616825 ARMC9Q7Z3E5 817 aa19.23■□□□□ 0.67
ATXN2-227ENST00000616825 METTL23Q86XA0 190 aa19.23■□□□□ 0.67
ATXN2-227ENST00000616825 GRAMD1CQ8IYS0 662 aa19.23■□□□□ 0.67
ATXN2-227ENST00000616825 FTOQ9C0B1 505 aaKnown RBP eCLIP19.23■□□□□ 0.67
ATXN2-227ENST00000616825 RNF14Q9UBS8 474 aa19.23■□□□□ 0.67
ATXN2-227ENST00000616825 MAGI2Q86UL8 1455 aa19.23■□□□□ 0.67
ATXN2-227ENST00000616825 ARHGEF37A1IGU5 675 aa19.23■□□□□ 0.67
ATXN2-227ENST00000616825 PGRMC1O00264 195 aaKnown RBP19.23■□□□□ 0.67
ATXN2-227ENST00000616825 HSPA6P17066 643 aa19.23■□□□□ 0.67
ATXN2-227ENST00000616825 RFC1P35251 1148 aaPredicted RBP19.23■□□□□ 0.67
ATXN2-227ENST00000616825 DBN1Q16643 649 aa19.23■□□□□ 0.67
ATXN2-227ENST00000616825 SPATS2Q86XZ4 545 aaKnown RBP19.23■□□□□ 0.67
ATXN2-227ENST00000616825 RFX6Q8HWS3 928 aa19.23■□□□□ 0.67
ATXN2-227ENST00000616825 HINFPQ9BQA5 517 aa19.23■□□□□ 0.67
ATXN2-227ENST00000616825 ZFYVE16Q7Z3T8 1539 aa19.23■□□□□ 0.67
ATXN2-227ENST00000616825 H7C1W4 665 aa19.22■□□□□ 0.67
ATXN2-227ENST00000616825 SGK1O00141 431 aa19.22■□□□□ 0.67
ATXN2-227ENST00000616825 NPR1P16066 1061 aa19.22■□□□□ 0.67
ATXN2-227ENST00000616825 MTERF2Q49AM1 385 aa19.22■□□□□ 0.67
ATXN2-227ENST00000616825 NRBP1Q9UHY1 535 aa19.22■□□□□ 0.67
ATXN2-227ENST00000616825 ANAPC5Q9UJX4 755 aa19.22■□□□□ 0.67
ATXN2-227ENST00000616825 PLA2G4BP0C869 781 aa19.22■□□□□ 0.67
ATXN2-227ENST00000616825 XPAP23025 273 aaPredicted RBP19.22■□□□□ 0.67
ATXN2-227ENST00000616825 CDK8P49336 464 aa19.22■□□□□ 0.67
ATXN2-227ENST00000616825 Q3C1V9 767 aa19.22■□□□□ 0.67
ATXN2-227ENST00000616825 CIAPIN1Q6FI81 312 aa19.22■□□□□ 0.67
ATXN2-227ENST00000616825 LRRC4Q9HBW1 653 aa19.22■□□□□ 0.67
ATXN2-227ENST00000616825 RPAP1Q9BWH6 1393 aaPredicted RBP19.22■□□□□ 0.67
ATXN2-227ENST00000616825 NECTIN1Q15223 517 aa19.22■□□□□ 0.67
ATXN2-227ENST00000616825 SUSD4Q5VX71 490 aa19.22■□□□□ 0.67
ATXN2-227ENST00000616825 CCNYQ8ND76 341 aa19.22■□□□□ 0.67
ATXN2-227ENST00000616825 STRBPQ96SI9 672 aaKnown RBP19.22■□□□□ 0.67
ATXN2-227ENST00000616825 MAN1B1Q9UKM7 699 aa19.22■□□□□ 0.67
ATXN2-227ENST00000616825 KIF3CO14782 793 aa19.22■□□□□ 0.67
ATXN2-227ENST00000616825 RBL2Q08999 1139 aa19.22■□□□□ 0.67
ATXN2-227ENST00000616825 DNAJC24Q6P3W2 148 aa19.22■□□□□ 0.67
ATXN2-227ENST00000616825 SKA2Q8WVK7 121 aaPredicted RBP19.22■□□□□ 0.67
ATXN2-227ENST00000616825 INTS9Q9NV88 658 aaKnown RBP19.22■□□□□ 0.67
ATXN2-227ENST00000616825 PNMA6FA0A0J9YX94 578 aa19.21■□□□□ 0.67
ATXN2-227ENST00000616825 PLCG1P19174 1290 aa19.21■□□□□ 0.67
ATXN2-227ENST00000616825 ARL4AP40617 200 aa19.21■□□□□ 0.67
ATXN2-227ENST00000616825 ECE1P42892 770 aa19.21■□□□□ 0.67
ATXN2-227ENST00000616825 ASPHQ12797 758 aa19.21■□□□□ 0.67
ATXN2-227ENST00000616825 KIAA1841Q6NSI8 718 aa19.21■□□□□ 0.67
ATXN2-227ENST00000616825 EEPD1Q7L9B9 569 aa19.21■□□□□ 0.67
ATXN2-227ENST00000616825 SRP68Q9UHB9 627 aaKnown RBP19.21■□□□□ 0.67
ATXN2-227ENST00000616825 RWDD2AQ9UIY3 292 aa19.21■□□□□ 0.67
ATXN2-227ENST00000616825 PTPN22Q9Y2R2 807 aa19.21■□□□□ 0.67
ATXN2-227ENST00000616825 ATP7BP35670 1465 aa19.21■□□□□ 0.67
ATXN2-227ENST00000616825 SPATA31E1Q6ZUB1 1445 aa19.21■□□□□ 0.67
ATXN2-227ENST00000616825 MMP10P09238 476 aa19.21■□□□□ 0.67
ATXN2-227ENST00000616825 CCND2P30279 289 aa19.21■□□□□ 0.67
ATXN2-227ENST00000616825 CDC25BP30305 580 aa19.21■□□□□ 0.67
ATXN2-227ENST00000616825 SGO2Q562F6 1265 aa19.21■□□□□ 0.67
ATXN2-227ENST00000616825 CFAP61Q8NHU2 1237 aa19.21■□□□□ 0.67
ATXN2-227ENST00000616825 PIH1D3Q9NQM4 214 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms