RNA–Protein interactions for RNA: ENST00000616803.4

CBWD1-224, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-224ENST00000616803 RIOX2Q8IUF8 465 aa5.4□□□□□ -1.54
CBWD1-224ENST00000616803 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.4□□□□□ -1.54
CBWD1-224ENST00000616803 CLEC4DQ8WXI8 215 aa5.4□□□□□ -1.54
CBWD1-224ENST00000616803 CHAMP1Q96JM3 812 aa5.4□□□□□ -1.54
CBWD1-224ENST00000616803 LUC7LQ9NQ29 371 aaKnown RBP5.4□□□□□ -1.54
CBWD1-224ENST00000616803 CLDND1Q9NY35 253 aa5.4□□□□□ -1.54
CBWD1-224ENST00000616803 FAN1Q9Y2M0 1017 aa5.4□□□□□ -1.54
CBWD1-224ENST00000616803 EIF4G1Q04637 1599 aaKnown RBP5.4□□□□□ -1.55
CBWD1-224ENST00000616803 FAM221BA6H8Z2 402 aa5.39□□□□□ -1.55
CBWD1-224ENST00000616803 NOBOXO60393 691 aa5.39□□□□□ -1.55
CBWD1-224ENST00000616803 LRG1P02750 347 aa5.39□□□□□ -1.55
CBWD1-224ENST00000616803 PABPC1P11940 636 aaKnown RBP5.39□□□□□ -1.55
CBWD1-224ENST00000616803 KCNC1P48547 511 aa5.39□□□□□ -1.55
CBWD1-224ENST00000616803 ITGA1P56199 1179 aa5.39□□□□□ -1.55
CBWD1-224ENST00000616803 MAP4K2Q12851 820 aa5.39□□□□□ -1.55
CBWD1-224ENST00000616803 KCNAB2Q13303 367 aa5.39□□□□□ -1.55
CBWD1-224ENST00000616803 ADAM9Q13443 819 aa5.39□□□□□ -1.55
CBWD1-224ENST00000616803 PRR31Q5SQ13 230 aa5.39□□□□□ -1.55
CBWD1-224ENST00000616803 NT5DC1Q5TFE4 455 aa5.39□□□□□ -1.55
CBWD1-224ENST00000616803 MROH9Q5TGP6 573 aa5.39□□□□□ -1.55
CBWD1-224ENST00000616803 PROSER1Q86XN7 944 aa5.39□□□□□ -1.55
CBWD1-224ENST00000616803 CARFQ8N187 725 aa5.39□□□□□ -1.55
CBWD1-224ENST00000616803 DDX1Q92499 740 aaKnown RBP5.39□□□□□ -1.55
CBWD1-224ENST00000616803 CCDC140Q96MF4 163 aa5.39□□□□□ -1.55
CBWD1-224ENST00000616803 PHF20Q9BVI0 1012 aa5.39□□□□□ -1.55
CBWD1-224ENST00000616803 RTEL1Q9NZ71 1219 aa5.39□□□□□ -1.55
CBWD1-224ENST00000616803 PFDN2Q9UHV9 154 aa5.39□□□□□ -1.55
CBWD1-224ENST00000616803 NUDT5Q9UKK9 219 aa5.39□□□□□ -1.55
CBWD1-224ENST00000616803 TRAF6Q9Y4K3 522 aa5.39□□□□□ -1.55
CBWD1-224ENST00000616803 TCRBV5S4A2TA0A5A2 114 aa5.38□□□□□ -1.55
CBWD1-224ENST00000616803 CCDC85CA6NKD9 419 aa5.38□□□□□ -1.55
CBWD1-224ENST00000616803 NKRFO15226 690 aaKnown RBP eCLIP5.38□□□□□ -1.55
CBWD1-224ENST00000616803 SLC6A11P48066 632 aa5.38□□□□□ -1.55
CBWD1-224ENST00000616803 NFIXQ14938 502 aa5.38□□□□□ -1.55
CBWD1-224ENST00000616803 FAM209AQ5JX71 171 aa5.38□□□□□ -1.55
CBWD1-224ENST00000616803 ETV3LQ6ZN32 361 aa5.38□□□□□ -1.55
CBWD1-224ENST00000616803 ZNF761Q86XN6 746 aaPredicted RBP5.38□□□□□ -1.55
CBWD1-224ENST00000616803 DCP2Q8IU60 420 aaKnown RBP5.38□□□□□ -1.55
CBWD1-224ENST00000616803 FAM126BQ8IXS8 530 aa5.38□□□□□ -1.55
CBWD1-224ENST00000616803 PIP4K2CQ8TBX8 421 aa5.38□□□□□ -1.55
CBWD1-224ENST00000616803 KCTD13Q8WZ19 329 aa5.38□□□□□ -1.55
CBWD1-224ENST00000616803 SEC14L1Q92503 715 aa5.38□□□□□ -1.55
CBWD1-224ENST00000616803 TOP2AP11388 1531 aaKnown RBP5.38□□□□□ -1.55
CBWD1-224ENST00000616803 H7BY64 318 aa5.37□□□□□ -1.55
CBWD1-224ENST00000616803 SLC27A2O14975 620 aa5.37□□□□□ -1.55
CBWD1-224ENST00000616803 SASH1O94885 1247 aa5.37□□□□□ -1.55
CBWD1-224ENST00000616803 C6orf222P0C671 652 aaPredicted RBP5.37□□□□□ -1.55
CBWD1-224ENST00000616803 FAM153BP0C7A2 387 aa5.37□□□□□ -1.55
CBWD1-224ENST00000616803 FGFR1P11362 822 aa5.37□□□□□ -1.55
CBWD1-224ENST00000616803 SYN1P17600 705 aa5.37□□□□□ -1.55
CBWD1-224ENST00000616803 ZC3H6P61129 1189 aaKnown RBP5.37□□□□□ -1.55
CBWD1-224ENST00000616803 GRIN1Q05586 938 aa5.37□□□□□ -1.55
CBWD1-224ENST00000616803 STEAP3Q658P3 488 aa5.37□□□□□ -1.55
CBWD1-224ENST00000616803 NSMFQ6X4W1 530 aa5.37□□□□□ -1.55
CBWD1-224ENST00000616803 ZSWIM3Q96MP5 696 aa5.37□□□□□ -1.55
CBWD1-224ENST00000616803 AARSD1Q9BTE6 412 aaKnown RBP5.37□□□□□ -1.55
CBWD1-224ENST00000616803 SPATA9Q9BWV2 254 aa5.37□□□□□ -1.55
CBWD1-224ENST00000616803 EPN3Q9H201 632 aa5.37□□□□□ -1.55
CBWD1-224ENST00000616803 R3HCC1Q9Y3T6 440 aaKnown RBP5.37□□□□□ -1.55
CBWD1-224ENST00000616803 HGSO14964 777 aaPredicted RBP5.36□□□□□ -1.55
CBWD1-224ENST00000616803 CYP2C8P10632 490 aa5.36□□□□□ -1.55
CBWD1-224ENST00000616803 SARSP49591 514 aaKnown RBP5.36□□□□□ -1.55
CBWD1-224ENST00000616803 MLLT6P55198 1093 aaPredicted RBP5.36□□□□□ -1.55
CBWD1-224ENST00000616803 SERINC3Q13530 473 aa5.36□□□□□ -1.55
CBWD1-224ENST00000616803 HSP90AA2PQ14568 343 aaPredicted RBP5.36□□□□□ -1.55
CBWD1-224ENST00000616803 EMC4Q5J8M3 183 aa5.36□□□□□ -1.55
CBWD1-224ENST00000616803 TEPPQ6URK8 271 aa5.36□□□□□ -1.55
CBWD1-224ENST00000616803 LBX2Q6XYB7 198 aa5.36□□□□□ -1.55
CBWD1-224ENST00000616803 NLGN1Q8N2Q7 840 aa5.36□□□□□ -1.55
CBWD1-224ENST00000616803 SH3RF2Q8TEC5 729 aa5.36□□□□□ -1.55
CBWD1-224ENST00000616803 SGSM3Q96HU1 749 aa5.36□□□□□ -1.55
CBWD1-224ENST00000616803 EXOC2Q96KP1 924 aa5.36□□□□□ -1.55
CBWD1-224ENST00000616803 KCNJ15Q99712 375 aa5.36□□□□□ -1.55
CBWD1-224ENST00000616803 TANGO6Q9C0B7 1094 aa5.36□□□□□ -1.55
CBWD1-224ENST00000616803 AP5M1Q9H0R1 490 aa5.36□□□□□ -1.55
CBWD1-224ENST00000616803 GPR27Q9NS67 375 aa5.36□□□□□ -1.55
CBWD1-224ENST00000616803 PEG3Q9GZU2 1588 aa5.36□□□□□ -1.55
CBWD1-224ENST00000616803 DDX3XO00571 662 aaKnown RBP eCLIP5.35□□□□□ -1.55
CBWD1-224ENST00000616803 PDPK1O15530 556 aa5.35□□□□□ -1.55
CBWD1-224ENST00000616803 STK10O94804 968 aaKnown RBP5.35□□□□□ -1.55
CBWD1-224ENST00000616803 GTF2F1P35269 517 aaKnown RBP eCLIP5.35□□□□□ -1.55
CBWD1-224ENST00000616803 MCTP2Q6DN12 878 aa5.35□□□□□ -1.55
CBWD1-224ENST00000616803 KYQ8NBH2 561 aa5.35□□□□□ -1.55
CBWD1-224ENST00000616803 ST13P5Q8NFI4 369 aaPredicted RBP5.35□□□□□ -1.55
CBWD1-224ENST00000616803 ADAMTS17Q8TE56 1095 aa5.35□□□□□ -1.55
CBWD1-224ENST00000616803 IPPKQ9H8X2 491 aa5.35□□□□□ -1.55
CBWD1-224ENST00000616803 ZNF652Q9Y2D9 606 aa5.35□□□□□ -1.55
CBWD1-224ENST00000616803 SMARCA2P51531 1590 aa5.34□□□□□ -1.55
CBWD1-224ENST00000616803 ACOT7O00154 380 aa5.34□□□□□ -1.55
CBWD1-224ENST00000616803 MYO1BO43795 1136 aa5.34□□□□□ -1.55
CBWD1-224ENST00000616803 GTF2A2P52657 109 aa5.34□□□□□ -1.55
CBWD1-224ENST00000616803 NFKB2Q00653 900 aa5.34□□□□□ -1.55
CBWD1-224ENST00000616803 RASA3Q14644 834 aa5.34□□□□□ -1.55
CBWD1-224ENST00000616803 HABP4Q5JVS0 413 aaKnown RBP5.34□□□□□ -1.55
CBWD1-224ENST00000616803 STYK1Q6J9G0 422 aa5.34□□□□□ -1.55
CBWD1-224ENST00000616803 TMC5Q6UXY8 1006 aa5.34□□□□□ -1.55
CBWD1-224ENST00000616803 OTOP3Q7RTS5 596 aa5.34□□□□□ -1.55
CBWD1-224ENST00000616803 FRMD5Q7Z6J6 570 aa5.34□□□□□ -1.55
CBWD1-224ENST00000616803 SP8Q8IXZ3 490 aa5.34□□□□□ -1.55
CBWD1-224ENST00000616803 CXorf38Q8TB03 319 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms