RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 ZNF202O95125 648 aa16.91■□□□□ 0.3
NOP56-220ENST00000616692 ZNF165P49910 485 aa16.91■□□□□ 0.3
NOP56-220ENST00000616692 CCT8P50990 548 aa16.91■□□□□ 0.3
NOP56-220ENST00000616692 SCARF1Q14162 830 aa16.91■□□□□ 0.3
NOP56-220ENST00000616692 TMCO5AQ8N6Q1 288 aa16.91■□□□□ 0.3
NOP56-220ENST00000616692 CSRNP1Q96S65 589 aa16.91■□□□□ 0.3
NOP56-220ENST00000616692 NDNQ99608 321 aa16.91■□□□□ 0.3
NOP56-220ENST00000616692 RPAP3Q9H6T3 665 aaPredicted RBP16.91■□□□□ 0.3
NOP56-220ENST00000616692 SH3GLB1Q9Y371 365 aa16.91■□□□□ 0.3
NOP56-220ENST00000616692 COL4A1P02462 1669 aa16.9■□□□□ 0.3
NOP56-220ENST00000616692 A0A1B0GVL5 298 aa16.9■□□□□ 0.3
NOP56-220ENST00000616692 Q6ZUG5 572 aa16.9■□□□□ 0.3
NOP56-220ENST00000616692 WDR66Q8TBY9 1149 aa16.9■□□□□ 0.3
NOP56-220ENST00000616692 ZIC5Q96T25 663 aa16.9■□□□□ 0.3
NOP56-220ENST00000616692 NRDE2Q9H7Z3 1164 aa16.9■□□□□ 0.3
NOP56-220ENST00000616692 SSX2IPQ9Y2D8 614 aa16.9■□□□□ 0.3
NOP56-220ENST00000616692 DIS3Q9Y2L1 958 aaKnown RBP16.9■□□□□ 0.3
NOP56-220ENST00000616692 SCN9AQ15858 1988 aa16.9■□□□□ 0.3
NOP56-220ENST00000616692 TRIM43BA6NCK2 446 aa16.9■□□□□ 0.3
NOP56-220ENST00000616692 GOLGA6L4A6NEF3 574 aa16.9■□□□□ 0.3
NOP56-220ENST00000616692 VIMP08670 466 aaKnown RBP16.9■□□□□ 0.3
NOP56-220ENST00000616692 TGFB3P10600 412 aa16.9■□□□□ 0.3
NOP56-220ENST00000616692 CSE1LP55060 971 aaKnown RBP16.9■□□□□ 0.3
NOP56-220ENST00000616692 USH1GQ495M9 461 aa16.9■□□□□ 0.3
NOP56-220ENST00000616692 MAML3Q96JK9 1138 aa16.9■□□□□ 0.3
NOP56-220ENST00000616692 NOP53Q9NZM5 478 aaKnown RBP16.9■□□□□ 0.3
NOP56-220ENST00000616692 IMPACTQ9P2X3 320 aa16.9■□□□□ 0.3
NOP56-220ENST00000616692 A6NNZ2 444 aa16.89■□□□□ 0.29
NOP56-220ENST00000616692 KDM1AO60341 852 aa16.89■□□□□ 0.29
NOP56-220ENST00000616692 EGFRP00533 1210 aa16.89■□□□□ 0.29
NOP56-220ENST00000616692 ENDOUP21128 410 aaKnown RBP16.89■□□□□ 0.29
NOP56-220ENST00000616692 TUBB8Q3ZCM7 444 aa16.89■□□□□ 0.29
NOP56-220ENST00000616692 ERICH1Q86X53 443 aa16.89■□□□□ 0.29
NOP56-220ENST00000616692 ZNF653Q96CK0 615 aa16.89■□□□□ 0.29
NOP56-220ENST00000616692 NACAP1Q9BZK3 213 aa16.89■□□□□ 0.29
NOP56-220ENST00000616692 TNMDQ9H2S6 317 aa16.89■□□□□ 0.29
NOP56-220ENST00000616692 MYOZ2Q9NPC6 264 aa16.89■□□□□ 0.29
NOP56-220ENST00000616692 CIDEBQ9UHD4 219 aa16.89■□□□□ 0.29
NOP56-220ENST00000616692 CFAP69A5D8W1 941 aa16.89■□□□□ 0.29
NOP56-220ENST00000616692 N4BP3O15049 544 aa16.89■□□□□ 0.29
NOP56-220ENST00000616692 CHMP4BP1P59074 171 aa16.89■□□□□ 0.29
NOP56-220ENST00000616692 EXOC3L1Q86VI1 746 aa16.89■□□□□ 0.29
NOP56-220ENST00000616692 CCDC146Q8IYE0 955 aa16.89■□□□□ 0.29
NOP56-220ENST00000616692 ZMAT5Q9UDW3 170 aaKnown RBP16.89■□□□□ 0.29
NOP56-220ENST00000616692 FIBPO43427 364 aa16.88■□□□□ 0.29
NOP56-220ENST00000616692 SUPT3HO75486 399 aa16.88■□□□□ 0.29
NOP56-220ENST00000616692 FOSL1P15407 271 aa16.88■□□□□ 0.29
NOP56-220ENST00000616692 KCNA1Q09470 495 aa16.88■□□□□ 0.29
NOP56-220ENST00000616692 DEPTORQ8TB45 409 aa16.88■□□□□ 0.29
NOP56-220ENST00000616692 MORC4Q8TE76 937 aa16.88■□□□□ 0.29
NOP56-220ENST00000616692 R3HDM2Q9Y2K5 976 aaKnown RBP16.88■□□□□ 0.29
NOP56-220ENST00000616692 CASP8AP2Q9UKL3 1982 aa16.88■□□□□ 0.29
NOP56-220ENST00000616692 TARSL2A2RTX5 802 aaKnown RBP16.88■□□□□ 0.29
NOP56-220ENST00000616692 MAP3K13O43283 966 aa16.88■□□□□ 0.29
NOP56-220ENST00000616692 TUBBP07437 444 aa16.88■□□□□ 0.29
NOP56-220ENST00000616692 TM4SF4P48230 202 aa16.88■□□□□ 0.29
NOP56-220ENST00000616692 MAATS1Q7Z4T9 603 aa16.88■□□□□ 0.29
NOP56-220ENST00000616692 SNX27Q96L92 541 aa16.88■□□□□ 0.29
NOP56-220ENST00000616692 MYD88Q99836 296 aa16.88■□□□□ 0.29
NOP56-220ENST00000616692 COA1Q9GZY4 146 aa16.88■□□□□ 0.29
NOP56-220ENST00000616692 RSPH9Q9H1X1 276 aaPredicted RBP16.88■□□□□ 0.29
NOP56-220ENST00000616692 DMAP1Q9NPF5 467 aaPredicted RBP16.88■□□□□ 0.29
NOP56-220ENST00000616692 KCNQ5Q9NR82 932 aa16.88■□□□□ 0.29
NOP56-220ENST00000616692 LEMD3Q9Y2U8 911 aa16.88■□□□□ 0.29
NOP56-220ENST00000616692 POLE2P56282 527 aa16.87■□□□□ 0.29
NOP56-220ENST00000616692 TUBB4BP68371 445 aa16.87■□□□□ 0.29
NOP56-220ENST00000616692 XRCC4Q13426 336 aa16.87■□□□□ 0.29
NOP56-220ENST00000616692 ITGA7Q13683 1181 aa16.87■□□□□ 0.29
NOP56-220ENST00000616692 COL19A1Q14993 1142 aa16.87■□□□□ 0.29
NOP56-220ENST00000616692 ARHGEF6Q15052 776 aa16.87■□□□□ 0.29
NOP56-220ENST00000616692 NEUROD2Q15784 382 aa16.87■□□□□ 0.29
NOP56-220ENST00000616692 ANGEL2Q5VTE6 544 aaKnown RBP16.87■□□□□ 0.29
NOP56-220ENST00000616692 CCSAPQ6IQ19 270 aaPredicted RBP16.87■□□□□ 0.29
NOP56-220ENST00000616692 RSPH3Q86UC2 560 aa16.87■□□□□ 0.29
NOP56-220ENST00000616692 TRIM50Q86XT4 487 aa16.87■□□□□ 0.29
NOP56-220ENST00000616692 LRRC27Q9C0I9 530 aa16.87■□□□□ 0.29
NOP56-220ENST00000616692 SEC31BQ9NQW1 1179 aa16.87■□□□□ 0.29
NOP56-220ENST00000616692 HESX1Q9UBX0 185 aa16.87■□□□□ 0.29
NOP56-220ENST00000616692 TTLL3Q9Y4R7 772 aa16.87■□□□□ 0.29
NOP56-220ENST00000616692 SPDYE5A6NIY4 337 aa16.87■□□□□ 0.29
NOP56-220ENST00000616692 OPLAHO14841 1288 aa16.87■□□□□ 0.29
NOP56-220ENST00000616692 HSPA4P34932 840 aa16.87■□□□□ 0.29
NOP56-220ENST00000616692 CAMK2BQ13554 666 aa16.87■□□□□ 0.29
NOP56-220ENST00000616692 STRIP1Q5VSL9 837 aa16.87■□□□□ 0.29
NOP56-220ENST00000616692 POTEEQ6S8J3 1075 aa16.87■□□□□ 0.29
NOP56-220ENST00000616692 DDX27Q96GQ7 796 aaKnown RBP16.87■□□□□ 0.29
NOP56-220ENST00000616692 UIMC1Q96RL1 719 aa16.87■□□□□ 0.29
NOP56-220ENST00000616692 JADE2Q9NQC1 790 aa16.87■□□□□ 0.29
NOP56-220ENST00000616692 POLR2AP24928 1970 aaKnown RBP16.87■□□□□ 0.29
NOP56-220ENST00000616692 CTSWP56202 376 aa16.86■□□□□ 0.29
NOP56-220ENST00000616692 KSR2Q6VAB6 950 aa16.86■□□□□ 0.29
NOP56-220ENST00000616692 PLA2G12BQ9BX93 195 aa16.86■□□□□ 0.29
NOP56-220ENST00000616692 CARD8Q9Y2G2 431 aa16.86■□□□□ 0.29
NOP56-220ENST00000616692 ZNF646O15015 1829 aaPredicted RBP16.86■□□□□ 0.29
NOP56-220ENST00000616692 HTR3EA5X5Y0 456 aa16.86■□□□□ 0.29
NOP56-220ENST00000616692 SLC26A4O43511 780 aa16.86■□□□□ 0.29
NOP56-220ENST00000616692 TRPA1O75762 1119 aa16.86■□□□□ 0.29
NOP56-220ENST00000616692 GSTM4Q03013 218 aa16.86■□□□□ 0.29
NOP56-220ENST00000616692 ITIH3Q06033 890 aa16.86■□□□□ 0.29
NOP56-220ENST00000616692 SRGAP1Q7Z6B7 1085 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms