RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 LOC102724159A0A0B4J2E5 919 aa15.41■□□□□ 0.06
CACNA1C-231ENST00000616390 POTEB3A0JP26 581 aa15.41■□□□□ 0.06
CACNA1C-231ENST00000616390 POTECB2RU33 542 aa15.41■□□□□ 0.06
CACNA1C-231ENST00000616390 TRAF5O00463 557 aa15.41■□□□□ 0.06
CACNA1C-231ENST00000616390 ZNF185O15231 689 aa15.41■□□□□ 0.06
CACNA1C-231ENST00000616390 KRT83P78385 493 aa15.41■□□□□ 0.06
CACNA1C-231ENST00000616390 SEPT2Q15019 361 aa15.41■□□□□ 0.06
CACNA1C-231ENST00000616390 PWP2Q15269 919 aaKnown RBP15.41■□□□□ 0.06
CACNA1C-231ENST00000616390 CERKLQ49MI3 558 aaPredicted RBP15.41■□□□□ 0.06
CACNA1C-231ENST00000616390 POTEBQ6S5H4 581 aa15.41■□□□□ 0.06
CACNA1C-231ENST00000616390 RRAGAQ7L523 313 aa15.41■□□□□ 0.06
CACNA1C-231ENST00000616390 PSMB7Q99436 277 aa15.41■□□□□ 0.06
CACNA1C-231ENST00000616390 CRACR2AQ9BSW2 395 aa15.41■□□□□ 0.06
CACNA1C-231ENST00000616390 NUP58Q9BVL2 599 aa15.41■□□□□ 0.06
CACNA1C-231ENST00000616390 FUT8Q9BYC5 575 aa15.41■□□□□ 0.06
CACNA1C-231ENST00000616390 JADE2Q9NQC1 790 aa15.41■□□□□ 0.06
CACNA1C-231ENST00000616390 STK17AQ9UEE5 414 aa15.41■□□□□ 0.06
CACNA1C-231ENST00000616390 KRT86O43790 486 aa15.41■□□□□ 0.06
CACNA1C-231ENST00000616390 VSNL1P62760 191 aa15.41■□□□□ 0.06
CACNA1C-231ENST00000616390 ANKRD13CQ8N6S4 541 aa15.41■□□□□ 0.06
CACNA1C-231ENST00000616390 ABCB6Q9NP58 842 aa15.41■□□□□ 0.06
CACNA1C-231ENST00000616390 NLRC4Q9NPP4 1024 aa15.41■□□□□ 0.06
CACNA1C-231ENST00000616390 PANK4Q9NVE7 773 aa15.41■□□□□ 0.06
CACNA1C-231ENST00000616390 hCG_1984214I3L0E3 225 aa15.4■□□□□ 0.06
CACNA1C-231ENST00000616390 ZMYND10O75800 440 aa15.4■□□□□ 0.06
CACNA1C-231ENST00000616390 KRT18P05783 430 aaKnown RBP15.4■□□□□ 0.06
CACNA1C-231ENST00000616390 NPR1P16066 1061 aa15.4■□□□□ 0.06
CACNA1C-231ENST00000616390 SATB1Q01826 763 aa15.4■□□□□ 0.06
CACNA1C-231ENST00000616390 PDIA5Q14554 519 aa15.4■□□□□ 0.06
CACNA1C-231ENST00000616390 GPATCH4Q5T3I0 446 aaKnown RBP15.4■□□□□ 0.06
CACNA1C-231ENST00000616390 SLFN13Q68D06 897 aa15.4■□□□□ 0.06
CACNA1C-231ENST00000616390 ZNF713Q8N859 430 aaPredicted RBP15.4■□□□□ 0.06
CACNA1C-231ENST00000616390 FOCADQ5VW36 1801 aa15.4■□□□□ 0.06
CACNA1C-231ENST00000616390 MEIS1O00470 390 aa15.4■□□□□ 0.06
CACNA1C-231ENST00000616390 ONECUT3O60422 494 aaPredicted RBP15.4■□□□□ 0.06
CACNA1C-231ENST00000616390 APBA1Q02410 837 aa15.4■□□□□ 0.06
CACNA1C-231ENST00000616390 COASYQ13057 564 aa15.4■□□□□ 0.06
CACNA1C-231ENST00000616390 SPICE1Q8N0Z3 855 aa15.4■□□□□ 0.06
CACNA1C-231ENST00000616390 OTUD6BQ8N6M0 293 aa15.4■□□□□ 0.06
CACNA1C-231ENST00000616390 CAGE1Q8TC20 777 aa15.4■□□□□ 0.06
CACNA1C-231ENST00000616390 GDAP1L1Q96MZ0 367 aa15.4■□□□□ 0.06
CACNA1C-231ENST00000616390 MMS19Q96T76 1030 aa15.4■□□□□ 0.06
CACNA1C-231ENST00000616390 SAR1BQ9Y6B6 198 aa15.4■□□□□ 0.06
CACNA1C-231ENST00000616390 SPA17Q15506 151 aa15.39■□□□□ 0.06
CACNA1C-231ENST00000616390 CDC37Q16543 378 aaPredicted RBP15.39■□□□□ 0.06
CACNA1C-231ENST00000616390 CCDC40Q4G0X9 1142 aa15.39■□□□□ 0.06
CACNA1C-231ENST00000616390 PRR16Q569H4 304 aa15.39■□□□□ 0.06
CACNA1C-231ENST00000616390 RNF217Q8TC41 542 aa15.39■□□□□ 0.06
CACNA1C-231ENST00000616390 MYO1AQ9UBC5 1043 aa15.39■□□□□ 0.06
CACNA1C-231ENST00000616390 SMCHD1A6NHR9 2005 aa15.39■□□□□ 0.05
CACNA1C-231ENST00000616390 PVALEFA0A1B0GWK0 134 aa15.39■□□□□ 0.05
CACNA1C-231ENST00000616390 KLRG2A4D1S0 409 aaPredicted RBP15.39■□□□□ 0.05
CACNA1C-231ENST00000616390 CCDC151A5D8V7 595 aa15.39■□□□□ 0.05
CACNA1C-231ENST00000616390 ZNF263O14978 683 aa15.39■□□□□ 0.05
CACNA1C-231ENST00000616390 ALDH1B1P30837 517 aa15.39■□□□□ 0.05
CACNA1C-231ENST00000616390 ARID5AQ03989 594 aa15.39■□□□□ 0.05
CACNA1C-231ENST00000616390 WHAMMP3Q1A5X7 153 aa15.39■□□□□ 0.05
CACNA1C-231ENST00000616390 HERC4Q5GLZ8 1057 aaPredicted RBP15.39■□□□□ 0.05
CACNA1C-231ENST00000616390 CACNA2D4Q7Z3S7 1137 aa15.39■□□□□ 0.05
CACNA1C-231ENST00000616390 MYOCDQ8IZQ8 938 aa15.39■□□□□ 0.05
CACNA1C-231ENST00000616390 SRCAPQ6ZRS2 3230 aa15.39■□□□□ 0.05
CACNA1C-231ENST00000616390 LRRC53A6NM62 1247 aa15.39■□□□□ 0.05
CACNA1C-231ENST00000616390 AKR1B10O60218 316 aa15.39■□□□□ 0.05
CACNA1C-231ENST00000616390 EIF4A3P38919 411 aaKnown RBP15.39■□□□□ 0.05
CACNA1C-231ENST00000616390 CLK2P49760 499 aaKnown RBP15.39■□□□□ 0.05
CACNA1C-231ENST00000616390 AMPD2Q01433 879 aa15.39■□□□□ 0.05
CACNA1C-231ENST00000616390 KIF5AQ12840 1032 aa15.39■□□□□ 0.05
CACNA1C-231ENST00000616390 MEA1Q16626 185 aa15.39■□□□□ 0.05
CACNA1C-231ENST00000616390 PPP4R3AQ6IN85 833 aa15.39■□□□□ 0.05
CACNA1C-231ENST00000616390 SLC30A10Q6XR72 485 aa15.39■□□□□ 0.05
CACNA1C-231ENST00000616390 GUF1Q8N442 669 aaKnown RBP15.39■□□□□ 0.05
CACNA1C-231ENST00000616390 TSG101Q99816 390 aa15.39■□□□□ 0.05
CACNA1C-231ENST00000616390 MLXIPQ9HAP2 919 aa15.39■□□□□ 0.05
CACNA1C-231ENST00000616390 BMP2KQ9NSY1 1161 aaPredicted RBP15.39■□□□□ 0.05
CACNA1C-231ENST00000616390 PLIN4Q96Q06 1357 aa15.38■□□□□ 0.05
CACNA1C-231ENST00000616390 POTEFA5A3E0 1075 aa15.38■□□□□ 0.05
CACNA1C-231ENST00000616390 POTEIP0CG38 1075 aa15.38■□□□□ 0.05
CACNA1C-231ENST00000616390 HOXA13P31271 388 aaPredicted RBP15.38■□□□□ 0.05
CACNA1C-231ENST00000616390 MRPS25P82663 173 aaKnown RBP15.38■□□□□ 0.05
CACNA1C-231ENST00000616390 POTEGQ6S5H5 508 aa15.38■□□□□ 0.05
CACNA1C-231ENST00000616390 POTEEQ6S8J3 1075 aa15.38■□□□□ 0.05
CACNA1C-231ENST00000616390 GPBP1Q86WP2 473 aa15.38■□□□□ 0.05
CACNA1C-231ENST00000616390 NLGN1Q8N2Q7 840 aa15.38■□□□□ 0.05
CACNA1C-231ENST00000616390 ERGIC2Q96RQ1 377 aa15.38■□□□□ 0.05
CACNA1C-231ENST00000616390 TDRD3Q9H7E2 651 aaKnown RBP15.38■□□□□ 0.05
CACNA1C-231ENST00000616390 ARHGAP20Q9P2F6 1191 aa15.38■□□□□ 0.05
CACNA1C-231ENST00000616390 ANKRD31Q8N7Z5 1873 aa15.38■□□□□ 0.05
CACNA1C-231ENST00000616390 DNA2P51530 1060 aa15.38■□□□□ 0.05
CACNA1C-231ENST00000616390 NAP1L1P55209 391 aaKnown RBP15.38■□□□□ 0.05
CACNA1C-231ENST00000616390 BRD3Q15059 726 aa15.38■□□□□ 0.05
CACNA1C-231ENST00000616390 MAN2A1Q16706 1144 aa15.38■□□□□ 0.05
CACNA1C-231ENST00000616390 TDRD12Q587J7 1177 aaKnown RBP15.38■□□□□ 0.05
CACNA1C-231ENST00000616390 FAM26FQ5R3K3 315 aa15.38■□□□□ 0.05
CACNA1C-231ENST00000616390 HHIPL2Q6UWX4 724 aa15.38■□□□□ 0.05
CACNA1C-231ENST00000616390 TMC4Q7Z404 712 aa15.38■□□□□ 0.05
CACNA1C-231ENST00000616390 RETREG2Q8NC44 543 aa15.38■□□□□ 0.05
CACNA1C-231ENST00000616390 DNAJC19Q96DA6 116 aa15.38■□□□□ 0.05
CACNA1C-231ENST00000616390 ANO3Q9BYT9 981 aa15.38■□□□□ 0.05
CACNA1C-231ENST00000616390 IFIH1Q9BYX4 1025 aaKnown RBP15.38■□□□□ 0.05
CACNA1C-231ENST00000616390 PDE11AQ9HCR9 933 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms