RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 KBTBD3Q8NAB2 608 aa10.02□□□□□ -0.8
COL12A1-211ENST00000615798 DDHD1Q8NEL9 900 aa10.02□□□□□ -0.8
COL12A1-211ENST00000615798 DDX54Q8TDD1 881 aaKnown RBP10.02□□□□□ -0.8
COL12A1-211ENST00000615798 CATSPER2Q96P56 530 aa10.02□□□□□ -0.8
COL12A1-211ENST00000615798 CCPG1Q9ULG6 757 aa10.02□□□□□ -0.8
COL12A1-211ENST00000615798 KLHL12Q53G59 568 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 NOP9Q86U38 636 aaKnown RBP10.02□□□□□ -0.81
COL12A1-211ENST00000615798 KLHL7Q8IXQ5 586 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 NR1H4Q96RI1 486 aaPredicted RBP10.02□□□□□ -0.81
COL12A1-211ENST00000615798 TMEM245Q9H330 911 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 CCSER2Q9H7U1 834 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 KLHL20Q9Y2M5 609 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 LRRIQ1Q96JM4 1722 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 SLC9A1P19634 815 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 CCDC105Q8IYK2 499 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 RAPGEF5Q92565 580 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 VPS16Q9H269 839 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 DEXIO95424 95 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 HOXC8P31273 242 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 MRPS35P82673 323 aaKnown RBP10.02□□□□□ -0.81
COL12A1-211ENST00000615798 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.02□□□□□ -0.81
COL12A1-211ENST00000615798 HPS5Q9UPZ3 1129 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 STX7O15400 261 aaKnown RBP10.02□□□□□ -0.81
COL12A1-211ENST00000615798 DCTN3O75935 186 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 ATP5JP18859 108 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 CRYMQ14894 314 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 CATSPER3Q86XQ3 398 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 FAM212AQ96EL1 285 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 ZBTB39O15060 712 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 BCAP31P51572 246 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 PDE1BQ01064 536 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 PPIDQ08752 370 aaKnown RBP10.02□□□□□ -0.81
COL12A1-211ENST00000615798 MYO1EQ12965 1108 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 GRK7Q8WTQ7 553 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 NAF1Q96HR8 494 aaKnown RBP10.02□□□□□ -0.81
COL12A1-211ENST00000615798 KAT14Q9H8E8 782 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 DLC1Q96QB1 1528 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 GNA11P29992 359 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 CALML6Q8TD86 181 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 DONSONQ9NYP3 566 aa10.02□□□□□ -0.81
COL12A1-211ENST00000615798 RNMTO43148 476 aaKnown RBP10.01□□□□□ -0.81
COL12A1-211ENST00000615798 TRMT44Q8IYL2 757 aaKnown RBP10.01□□□□□ -0.81
COL12A1-211ENST00000615798 ZKSCAN3Q9BRR0 538 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 PKD2L2Q9NZM6 624 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 SNX14Q9Y5W7 946 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 SAR1BQ9Y6B6 198 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 YY1P25490 414 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 SESN2P58004 480 aaPredicted RBP10.01□□□□□ -0.81
COL12A1-211ENST00000615798 CUL4AQ13619 759 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 CCDC28BQ9BUN5 200 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 ASNA1O43681 348 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 PIGUQ9H490 435 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 RNASE9P60153 205 aaKnown RBP10.01□□□□□ -0.81
COL12A1-211ENST00000615798 TFAP4Q01664 338 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 KLC1Q07866 573 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 EFR3AQ14156 821 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 KIAA0825Q8IV33 1275 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 SLC13A4Q9UKG4 626 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 NVLO15381 856 aaKnown RBP10.01□□□□□ -0.81
COL12A1-211ENST00000615798 DRP2Q13474 957 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 USH1GQ495M9 461 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 RAB44Q7Z6P3 723 aaPredicted RBP10.01□□□□□ -0.81
COL12A1-211ENST00000615798 PRPF38AQ8NAV1 312 aaKnown RBP10.01□□□□□ -0.81
COL12A1-211ENST00000615798 TRPV6Q9H1D0 765 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 RNPEPQ9H4A4 650 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 PARP10Q53GL7 1025 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 AFMP43652 599 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 MICU3Q86XE3 530 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 XAGE3Q8WTP9 111 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 PRDM5Q9NQX1 630 aaPredicted RBP10.01□□□□□ -0.81
COL12A1-211ENST00000615798 SFMBT1Q9UHJ3 866 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 PNPLA6Q8IY17 1366 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 RPN1P04843 607 aaKnown RBP10.01□□□□□ -0.81
COL12A1-211ENST00000615798 TNFAIP3P21580 790 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 APOBRQ0VD83 1088 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 HIF1AQ16665 826 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 ATP13A5Q4VNC0 1218 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 FAM180AQ6UWF9 173 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 HIC2Q96JB3 615 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 SERPINB13Q9UIV8 391 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 CCDC151A5D8V7 595 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 CUTAO60888 179 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 PLCD1P51178 756 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 PEX26Q7Z412 305 aa10.01□□□□□ -0.81
COL12A1-211ENST00000615798 SNRNP27Q8WVK2 155 aaKnown RBP10.01□□□□□ -0.81
COL12A1-211ENST00000615798 CLEC4MQ9H2X3 399 aaPredicted RBP10.01□□□□□ -0.81
COL12A1-211ENST00000615798 IDH3BO43837 385 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 SASH1O94885 1247 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 PARP1P09874 1014 aaKnown RBP10□□□□□ -0.81
COL12A1-211ENST00000615798 UBE3AQ05086 875 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 GATAD2AQ86YP4 633 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 RSPH10B2B2RC85 870 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 EYA2O00167 538 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 STX10O60499 249 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 CLASP2O75122 1294 aaKnown RBP10□□□□□ -0.81
COL12A1-211ENST00000615798 RSPH10BP0C881 870 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 AKR1D1P51857 326 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 IGBP1P78318 339 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 POMGNT1Q8WZA1 660 aa10□□□□□ -0.81
COL12A1-211ENST00000615798 NARS2Q96I59 477 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms