RNA–Protein interactions for RNA: ENST00000613721.4

TUBD1-216, Transcript of tubulin delta 1, humanhuman

TSL 5 BASIC

Gene TUBD1, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-216ENST00000613721 PRMT6Q96LA8 375 aaPredicted RBP13.29□□□□□ -0.28
TUBD1-216ENST00000613721 EIF3CQ99613 913 aaKnown RBP13.29□□□□□ -0.28
TUBD1-216ENST00000613721 NAP1L4Q99733 375 aaKnown RBP13.29□□□□□ -0.28
TUBD1-216ENST00000613721 ZHX1Q9UKY1 873 aaPredicted RBP13.29□□□□□ -0.28
TUBD1-216ENST00000613721 KDM3AQ9Y4C1 1321 aa13.28□□□□□ -0.28
TUBD1-216ENST00000613721 CDK17Q00537 523 aa13.28□□□□□ -0.28
TUBD1-216ENST00000613721 EHHADHQ08426 723 aa13.28□□□□□ -0.28
TUBD1-216ENST00000613721 PSMD2Q13200 908 aa13.28□□□□□ -0.28
TUBD1-216ENST00000613721 MAN2A1Q16706 1144 aa13.28□□□□□ -0.28
TUBD1-216ENST00000613721 LONRF2Q1L5Z9 754 aa13.28□□□□□ -0.28
TUBD1-216ENST00000613721 VWA3BQ502W6 1294 aa13.28□□□□□ -0.28
TUBD1-216ENST00000613721 ZDHHC15Q96MV8 337 aa13.28□□□□□ -0.28
TUBD1-216ENST00000613721 NDST4Q9H3R1 872 aa13.28□□□□□ -0.28
TUBD1-216ENST00000613721 SHTN1A0MZ66 631 aa13.28□□□□□ -0.28
TUBD1-216ENST00000613721 CLRN2A0PK11 232 aa13.28□□□□□ -0.28
TUBD1-216ENST00000613721 RAD21O60216 631 aa13.28□□□□□ -0.28
TUBD1-216ENST00000613721 FAM193AP78312 1265 aa13.28□□□□□ -0.28
TUBD1-216ENST00000613721 CHRDL2Q6WN34 429 aa13.28□□□□□ -0.28
TUBD1-216ENST00000613721 TRAPPC11Q7Z392 1133 aa13.28□□□□□ -0.28
TUBD1-216ENST00000613721 TSG101Q99816 390 aa13.28□□□□□ -0.28
TUBD1-216ENST00000613721 NT5C3AQ9H0P0 336 aa13.28□□□□□ -0.28
TUBD1-216ENST00000613721 GLT8D2Q9H1C3 349 aa13.28□□□□□ -0.28
TUBD1-216ENST00000613721 RAB21Q9UL25 225 aa13.28□□□□□ -0.28
TUBD1-216ENST00000613721 PCDHA12Q9UN75 941 aa13.28□□□□□ -0.28
TUBD1-216ENST00000613721 TFR2Q9UP52 801 aa13.28□□□□□ -0.28
TUBD1-216ENST00000613721 ERLIN1O75477 346 aa13.27□□□□□ -0.28
TUBD1-216ENST00000613721 GDF11O95390 407 aa13.27□□□□□ -0.28
TUBD1-216ENST00000613721 JAG1P78504 1218 aa13.27□□□□□ -0.28
TUBD1-216ENST00000613721 SEPT2Q15019 361 aa13.27□□□□□ -0.28
TUBD1-216ENST00000613721 ECM1Q16610 540 aa13.27□□□□□ -0.28
TUBD1-216ENST00000613721 QRICH1Q2TAL8 776 aa13.27□□□□□ -0.28
TUBD1-216ENST00000613721 CDAN1Q8IWY9 1227 aa13.27□□□□□ -0.28
TUBD1-216ENST00000613721 HNRNPLLQ8WVV9 542 aaKnown RBP13.27□□□□□ -0.28
TUBD1-216ENST00000613721 PNKPQ96T60 521 aa13.27□□□□□ -0.28
TUBD1-216ENST00000613721 FUT8Q9BYC5 575 aa13.27□□□□□ -0.28
TUBD1-216ENST00000613721 SIK3Q9Y2K2 1263 aa13.27□□□□□ -0.28
TUBD1-216ENST00000613721 ENC1O14682 589 aa13.27□□□□□ -0.29
TUBD1-216ENST00000613721 SLC1A4P43007 532 aa13.27□□□□□ -0.29
TUBD1-216ENST00000613721 HYIQ5T013 277 aa13.27□□□□□ -0.29
TUBD1-216ENST00000613721 NCAPH2Q6IBW4 605 aa13.27□□□□□ -0.29
TUBD1-216ENST00000613721 FOXR2Q6PJQ5 311 aa13.27□□□□□ -0.29
TUBD1-216ENST00000613721 LRRC55Q6ZSA7 311 aa13.27□□□□□ -0.29
TUBD1-216ENST00000613721 CCDC84Q86UT8 332 aaPredicted RBP13.27□□□□□ -0.29
TUBD1-216ENST00000613721 MYOCDQ8IZQ8 938 aa13.27□□□□□ -0.29
TUBD1-216ENST00000613721 LARGE2Q8N3Y3 721 aa13.27□□□□□ -0.29
TUBD1-216ENST00000613721 DCAF4Q8WV16 495 aa13.27□□□□□ -0.29
TUBD1-216ENST00000613721 GJA10Q969M2 543 aa13.27□□□□□ -0.29
TUBD1-216ENST00000613721 UBXN6Q9BZV1 441 aa13.27□□□□□ -0.29
TUBD1-216ENST00000613721 DHX36Q9H2U1 1008 aaKnown RBP13.27□□□□□ -0.29
TUBD1-216ENST00000613721 PLAGL2Q9UPG8 496 aa13.27□□□□□ -0.29
TUBD1-216ENST00000613721 ATP1A1P05023 1023 aaKnown RBP13.26□□□□□ -0.29
TUBD1-216ENST00000613721 RHOXF2BP0C7M4 288 aa13.26□□□□□ -0.29
TUBD1-216ENST00000613721 HNRNPH3P31942 346 aaKnown RBP13.26□□□□□ -0.29
TUBD1-216ENST00000613721 COASYQ13057 564 aa13.26□□□□□ -0.29
TUBD1-216ENST00000613721 RRP1BQ14684 758 aaKnown RBP13.26□□□□□ -0.29
TUBD1-216ENST00000613721 LRRC41Q15345 812 aa13.26□□□□□ -0.29
TUBD1-216ENST00000613721 DNAJC19Q96DA6 116 aa13.26□□□□□ -0.29
TUBD1-216ENST00000613721 CCDC42Q96M95 316 aa13.26□□□□□ -0.29
TUBD1-216ENST00000613721 RHOXF2Q9BQY4 288 aa13.26□□□□□ -0.29
TUBD1-216ENST00000613721 LACRTQ9GZZ8 138 aa13.26□□□□□ -0.29
TUBD1-216ENST00000613721 FAM207AQ9NSI2 230 aaPredicted RBP13.26□□□□□ -0.29
TUBD1-216ENST00000613721 BMP2KQ9NSY1 1161 aaPredicted RBP13.26□□□□□ -0.29
TUBD1-216ENST00000613721 PCDHA1Q9Y5I3 950 aa13.26□□□□□ -0.29
TUBD1-216ENST00000613721 SAR1BQ9Y6B6 198 aa13.26□□□□□ -0.29
TUBD1-216ENST00000613721 TCP10L2B9ZVM9 353 aa13.25□□□□□ -0.29
TUBD1-216ENST00000613721 USP17L15C9J2P7 530 aa13.25□□□□□ -0.29
TUBD1-216ENST00000613721 USP17L13C9JLJ4 530 aa13.25□□□□□ -0.29
TUBD1-216ENST00000613721 USP17L11C9JVI0 530 aa13.25□□□□□ -0.29
TUBD1-216ENST00000613721 USP17L18D6R9N7 530 aa13.25□□□□□ -0.29
TUBD1-216ENST00000613721 USP17L22D6RA61 530 aa13.25□□□□□ -0.29
TUBD1-216ENST00000613721 USP17L17D6RBQ6 530 aa13.25□□□□□ -0.29
TUBD1-216ENST00000613721 USP17L19D6RCP7 530 aa13.25□□□□□ -0.29
TUBD1-216ENST00000613721 USP17L20D6RJB6 530 aa13.25□□□□□ -0.29
TUBD1-216ENST00000613721 SSBP05455 408 aaKnown RBP eCLIP13.25□□□□□ -0.29
TUBD1-216ENST00000613721 EEF2P13639 858 aaKnown RBP13.25□□□□□ -0.29
TUBD1-216ENST00000613721 VAV2P52735 878 aa13.25□□□□□ -0.29
TUBD1-216ENST00000613721 USP17L24Q0WX57 530 aa13.25□□□□□ -0.29
TUBD1-216ENST00000613721 SMC1AQ14683 1233 aaKnown RBP13.25□□□□□ -0.29
TUBD1-216ENST00000613721 SPA17Q15506 151 aa13.25□□□□□ -0.29
TUBD1-216ENST00000613721 CDC37Q16543 378 aaPredicted RBP13.25□□□□□ -0.29
TUBD1-216ENST00000613721 CERKLQ49MI3 558 aaPredicted RBP13.25□□□□□ -0.29
TUBD1-216ENST00000613721 FAM26FQ5R3K3 315 aa13.25□□□□□ -0.29
TUBD1-216ENST00000613721 USP17L6PQ6QN14 398 aa13.25□□□□□ -0.29
TUBD1-216ENST00000613721 GLIS3Q8NEA6 775 aa13.25□□□□□ -0.29
TUBD1-216ENST00000613721 MKL1Q969V6 931 aa13.25□□□□□ -0.29
TUBD1-216ENST00000613721 TRIM34Q9BYJ4 488 aa13.25□□□□□ -0.29
TUBD1-216ENST00000613721 ANO3Q9BYT9 981 aa13.25□□□□□ -0.29
TUBD1-216ENST00000613721 TSGA10Q9BZW7 698 aa13.25□□□□□ -0.29
TUBD1-216ENST00000613721 MMRN2Q9H8L6 949 aa13.25□□□□□ -0.29
TUBD1-216ENST00000613721 KANSL2Q9H9L4 492 aa13.25□□□□□ -0.29
TUBD1-216ENST00000613721 NYAP2Q9P242 653 aa13.25□□□□□ -0.29
TUBD1-216ENST00000613721 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.25□□□□□ -0.29
TUBD1-216ENST00000613721 RCCD1A6NED2 376 aa13.25□□□□□ -0.29
TUBD1-216ENST00000613721 TUBBP07437 444 aa13.25□□□□□ -0.29
TUBD1-216ENST00000613721 TAL1P17542 331 aaPredicted RBP13.25□□□□□ -0.29
TUBD1-216ENST00000613721 OAS2P29728 719 aaKnown RBP13.25□□□□□ -0.29
TUBD1-216ENST00000613721 CYP27A1Q02318 531 aa13.25□□□□□ -0.29
TUBD1-216ENST00000613721 KIF5AQ12840 1032 aa13.25□□□□□ -0.29
TUBD1-216ENST00000613721 BEND6Q5SZJ8 279 aaPredicted RBP13.25□□□□□ -0.29
TUBD1-216ENST00000613721 PAPD7Q5XG87 772 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms