RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 KIAA0753Q2KHM9 967 aa15.53■□□□□ 0.08
COL6A1-207ENST00000612273 POTEBQ6S5H4 581 aa15.53■□□□□ 0.08
COL6A1-207ENST00000612273 TRMT1LQ7Z2T5 733 aaKnown RBP15.53■□□□□ 0.08
COL6A1-207ENST00000612273 RETREG2Q8NC44 543 aa15.53■□□□□ 0.08
COL6A1-207ENST00000612273 RTFDC1Q9BY42 306 aaPredicted RBP15.53■□□□□ 0.08
COL6A1-207ENST00000612273 FAM184BQ9ULE4 1060 aa15.53■□□□□ 0.08
COL6A1-207ENST00000612273 LDHCP07864 332 aa15.53■□□□□ 0.08
COL6A1-207ENST00000612273 GLI1P08151 1106 aa15.53■□□□□ 0.08
COL6A1-207ENST00000612273 MCM3P25205 808 aa15.53■□□□□ 0.08
COL6A1-207ENST00000612273 KLRC1P26715 233 aa15.53■□□□□ 0.08
COL6A1-207ENST00000612273 PRPHP41219 470 aa15.53■□□□□ 0.08
COL6A1-207ENST00000612273 IQCEQ6IPM2 695 aa15.53■□□□□ 0.08
COL6A1-207ENST00000612273 UNC13DQ70J99 1090 aa15.53■□□□□ 0.08
COL6A1-207ENST00000612273 CNBD1Q8NA66 436 aa15.53■□□□□ 0.08
COL6A1-207ENST00000612273 TLR10Q9BXR5 811 aa15.53■□□□□ 0.08
COL6A1-207ENST00000612273 CD209Q9NNX6 404 aa15.53■□□□□ 0.08
COL6A1-207ENST00000612273 PANK4Q9NVE7 773 aa15.53■□□□□ 0.08
COL6A1-207ENST00000612273 HYOU1Q9Y4L1 999 aa15.53■□□□□ 0.08
COL6A1-207ENST00000612273 BCORQ6W2J9 1755 aa15.53■□□□□ 0.08
COL6A1-207ENST00000612273 LAD1O00515 517 aa15.53■□□□□ 0.08
COL6A1-207ENST00000612273 TUBBP07437 444 aa15.53■□□□□ 0.08
COL6A1-207ENST00000612273 PDHBP11177 359 aa15.53■□□□□ 0.08
COL6A1-207ENST00000612273 MYOCDQ8IZQ8 938 aa15.53■□□□□ 0.08
COL6A1-207ENST00000612273 NGLY1Q96IV0 654 aa15.53■□□□□ 0.08
COL6A1-207ENST00000612273 TSG101Q99816 390 aa15.53■□□□□ 0.08
COL6A1-207ENST00000612273 PCDHA12Q9UN75 941 aa15.53■□□□□ 0.08
COL6A1-207ENST00000612273 UTRNP46939 3433 aa15.52■□□□□ 0.08
COL6A1-207ENST00000612273 LRP5O75197 1615 aa15.52■□□□□ 0.08
COL6A1-207ENST00000612273 GSTO1P78417 241 aa15.52■□□□□ 0.08
COL6A1-207ENST00000612273 KCNMA1Q12791 1236 aa15.52■□□□□ 0.08
COL6A1-207ENST00000612273 TCP10Q12799 353 aa15.52■□□□□ 0.08
COL6A1-207ENST00000612273 DCAF17Q5H9S7 520 aaPredicted RBP15.52■□□□□ 0.08
COL6A1-207ENST00000612273 FAM26FQ5R3K3 315 aa15.52■□□□□ 0.08
COL6A1-207ENST00000612273 FAM83BQ5T0W9 1011 aa15.52■□□□□ 0.08
COL6A1-207ENST00000612273 CCDC43Q96MW1 224 aaKnown RBP15.52■□□□□ 0.08
COL6A1-207ENST00000612273 NOX5Q96PH1 765 aa15.52■□□□□ 0.08
COL6A1-207ENST00000612273 DDX25Q9UHL0 483 aaKnown RBP15.52■□□□□ 0.08
COL6A1-207ENST00000612273 ZC3H4Q9UPT8 1303 aaKnown RBP15.52■□□□□ 0.08
COL6A1-207ENST00000612273 DOCK2Q92608 1830 aa15.52■□□□□ 0.07
COL6A1-207ENST00000612273 USP17L10C9JJH3 530 aa15.52■□□□□ 0.07
COL6A1-207ENST00000612273 HEXIM1O94992 359 aaKnown RBP15.52■□□□□ 0.07
COL6A1-207ENST00000612273 HPDP32754 393 aaPredicted RBP15.52■□□□□ 0.07
COL6A1-207ENST00000612273 CYP4A11Q02928 519 aa15.52■□□□□ 0.07
COL6A1-207ENST00000612273 COASYQ13057 564 aa15.52■□□□□ 0.07
COL6A1-207ENST00000612273 IKQ13123 557 aaPredicted RBP15.52■□□□□ 0.07
COL6A1-207ENST00000612273 CCDC84Q86UT8 332 aaPredicted RBP15.52■□□□□ 0.07
COL6A1-207ENST00000612273 SPZ1Q9BXG8 430 aa15.52■□□□□ 0.07
COL6A1-207ENST00000612273 TSGA10Q9BZW7 698 aa15.52■□□□□ 0.07
COL6A1-207ENST00000612273 IKZF4Q9H2S9 585 aa15.52■□□□□ 0.07
COL6A1-207ENST00000612273 ZNF287Q9HBT7 754 aa15.52■□□□□ 0.07
COL6A1-207ENST00000612273 BCS1LQ9Y276 419 aa15.52■□□□□ 0.07
COL6A1-207ENST00000612273 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.52■□□□□ 0.07
COL6A1-207ENST00000612273 A0A087X0T9 212 aa15.51■□□□□ 0.07
COL6A1-207ENST00000612273 ANO9A1A5B4 782 aa15.51■□□□□ 0.07
COL6A1-207ENST00000612273 FAM228BP0C875 321 aa15.51■□□□□ 0.07
COL6A1-207ENST00000612273 HAUS3Q68CZ6 603 aa15.51■□□□□ 0.07
COL6A1-207ENST00000612273 GALNT17Q6IS24 598 aa15.51■□□□□ 0.07
COL6A1-207ENST00000612273 NEDD1Q8NHV4 660 aa15.51■□□□□ 0.07
COL6A1-207ENST00000612273 RAD54LQ92698 747 aa15.51■□□□□ 0.07
COL6A1-207ENST00000612273 STIM2Q9P246 746 aa15.51■□□□□ 0.07
COL6A1-207ENST00000612273 SFI1A8K8P3 1242 aa15.51■□□□□ 0.07
COL6A1-207ENST00000612273 TMCO5BA8MYB1 307 aa15.51■□□□□ 0.07
COL6A1-207ENST00000612273 MYL1P05976 194 aa15.51■□□□□ 0.07
COL6A1-207ENST00000612273 IRAK1P51617 712 aa15.51■□□□□ 0.07
COL6A1-207ENST00000612273 SLC10A5Q5PT55 438 aa15.51■□□□□ 0.07
COL6A1-207ENST00000612273 DAGLBQ8NCG7 672 aa15.51■□□□□ 0.07
COL6A1-207ENST00000612273 CAPS2Q9BXY5 557 aa15.51■□□□□ 0.07
COL6A1-207ENST00000612273 CUEDC2Q9H467 287 aa15.51■□□□□ 0.07
COL6A1-207ENST00000612273 BACH1O14867 736 aa15.51■□□□□ 0.07
COL6A1-207ENST00000612273 TLR2O60603 784 aa15.51■□□□□ 0.07
COL6A1-207ENST00000612273 KLHL30Q0D2K2 578 aa15.51■□□□□ 0.07
COL6A1-207ENST00000612273 KLHDC7AQ5VTJ3 777 aa15.51■□□□□ 0.07
COL6A1-207ENST00000612273 SFMBT2Q5VUG0 894 aa15.51■□□□□ 0.07
COL6A1-207ENST00000612273 MAATS1Q7Z4T9 603 aa15.51■□□□□ 0.07
COL6A1-207ENST00000612273 ADAT2Q7Z6V5 191 aaKnown RBP15.51■□□□□ 0.07
COL6A1-207ENST00000612273 GPBP1Q86WP2 473 aa15.51■□□□□ 0.07
COL6A1-207ENST00000612273 DDX42Q86XP3 938 aaKnown RBP eCLIP15.51■□□□□ 0.07
COL6A1-207ENST00000612273 ZSCAN29Q8IWY8 852 aaPredicted RBP15.51■□□□□ 0.07
COL6A1-207ENST00000612273 BAP1Q92560 729 aa15.51■□□□□ 0.07
COL6A1-207ENST00000612273 AP1M1Q9BXS5 423 aa15.51■□□□□ 0.07
COL6A1-207ENST00000612273 BCCIPQ9P287 314 aaKnown RBP eCLIP15.51■□□□□ 0.07
COL6A1-207ENST00000612273 ANKRD36CQ5JPF3 1778 aa15.5■□□□□ 0.07
COL6A1-207ENST00000612273 POTEFA5A3E0 1075 aa15.5■□□□□ 0.07
COL6A1-207ENST00000612273 HSF2BPO75031 334 aa15.5■□□□□ 0.07
COL6A1-207ENST00000612273 POTEIP0CG38 1075 aa15.5■□□□□ 0.07
COL6A1-207ENST00000612273 IBSPP21815 317 aaPredicted RBP15.5■□□□□ 0.07
COL6A1-207ENST00000612273 PABPC4Q13310 644 aaKnown RBP eCLIP15.5■□□□□ 0.07
COL6A1-207ENST00000612273 SLC9C1Q4G0N8 1177 aa15.5■□□□□ 0.07
COL6A1-207ENST00000612273 POTEGQ6S5H5 508 aa15.5■□□□□ 0.07
COL6A1-207ENST00000612273 POTEEQ6S8J3 1075 aa15.5■□□□□ 0.07
COL6A1-207ENST00000612273 LRRC55Q6ZSA7 311 aa15.5■□□□□ 0.07
COL6A1-207ENST00000612273 FAM196AQ6ZSG2 479 aa15.5■□□□□ 0.07
COL6A1-207ENST00000612273 ADGRF4Q8IZF3 695 aa15.5■□□□□ 0.07
COL6A1-207ENST00000612273 RPGRIP1Q96KN7 1286 aa15.5■□□□□ 0.07
COL6A1-207ENST00000612273 RAB34Q9BZG1 259 aa15.5■□□□□ 0.07
COL6A1-207ENST00000612273 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.5■□□□□ 0.072e-6■■■■■ 149.1
COL6A1-207ENST00000612273 BMP2KQ9NSY1 1161 aaPredicted RBP15.5■□□□□ 0.07
COL6A1-207ENST00000612273 KCNK3O14649 394 aa15.5■□□□□ 0.07
COL6A1-207ENST00000612273 EDIL3O43854 480 aa15.5■□□□□ 0.07
COL6A1-207ENST00000612273 USH1GQ495M9 461 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms