RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 PIK3R5Q8WYR1 880 aa12.14□□□□□ -0.47
CDH4-202ENST00000611855 PARP4Q9UKK3 1724 aaKnown RBP12.14□□□□□ -0.47
CDH4-202ENST00000611855 TXKP42681 527 aa12.14□□□□□ -0.47
CDH4-202ENST00000611855 CFAP221Q4G0U5 840 aa12.14□□□□□ -0.47
CDH4-202ENST00000611855 YTHDF3Q7Z739 585 aaKnown RBP12.14□□□□□ -0.47
CDH4-202ENST00000611855 IQCKQ8N0W5 287 aa12.14□□□□□ -0.47
CDH4-202ENST00000611855 NSMCE1Q8WV22 266 aa12.14□□□□□ -0.47
CDH4-202ENST00000611855 NOX5Q96PH1 765 aa12.14□□□□□ -0.47
CDH4-202ENST00000611855 TCP11L1Q9NUJ3 509 aa12.14□□□□□ -0.47
CDH4-202ENST00000611855 STX8Q9UNK0 236 aa12.14□□□□□ -0.47
CDH4-202ENST00000611855 COL18A1P39060 1754 aa12.14□□□□□ -0.47
CDH4-202ENST00000611855 BICDL2A1A5D9 508 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 TFAP4Q01664 338 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 SLC35G1Q2M3R5 365 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 ANKRD20A8PQ5CZ79 823 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 RETREG2Q8NC44 543 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 SLC44A5Q8NCS7 719 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 GJA10Q969M2 543 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 HVCN1Q96D96 273 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 SEC16BQ96JE7 1060 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 ERGIC2Q96RQ1 377 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 TFCP2L1Q9NZI6 479 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 ANAPC4Q9UJX5 808 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 SIK3Q9Y2K2 1263 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 LEMD3Q9Y2U8 911 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 TIAM2Q8IVF5 1701 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 RAD51CO43502 376 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 CHADLQ6NUI6 762 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 FAM114A1Q8IWE2 563 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 UBLCP1Q8WVY7 318 aaPredicted RBP12.13□□□□□ -0.47
CDH4-202ENST00000611855 CCDC47Q96A33 483 aaKnown RBP12.13□□□□□ -0.47
CDH4-202ENST00000611855 AP1M1Q9BXS5 423 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 ACTR5Q9H9F9 607 aaPredicted RBP12.13□□□□□ -0.47
CDH4-202ENST00000611855 MCM9Q9NXL9 1143 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 GCOM1H8Y6P7 765 aaPredicted RBP12.13□□□□□ -0.47
CDH4-202ENST00000611855 UPP2O95045 317 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 MYZAPP0CAP1 466 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 KLRC1P26715 233 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 CALML3P27482 149 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 MRPL12P52815 198 aaKnown RBP12.13□□□□□ -0.47
CDH4-202ENST00000611855 RCSD1Q6JBY9 416 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 ZNF662Q6ZS27 426 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 TBC1D1Q86TI0 1168 aaPredicted RBP12.13□□□□□ -0.47
CDH4-202ENST00000611855 PNMA1Q8ND90 353 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 CAVIN3Q969G5 261 aa12.13□□□□□ -0.47
CDH4-202ENST00000611855 NOVA2Q9UNW9 492 aaKnown RBP12.13□□□□□ -0.47
CDH4-202ENST00000611855 DISP2A7MBM2 1401 aa12.12□□□□□ -0.47
CDH4-202ENST00000611855 MYBL1P10243 752 aa12.12□□□□□ -0.47
CDH4-202ENST00000611855 SLC8A1P32418 973 aa12.12□□□□□ -0.47
CDH4-202ENST00000611855 ITGB3BPQ13352 177 aaPredicted RBP12.12□□□□□ -0.47
CDH4-202ENST00000611855 NKX1-1Q15270 411 aaPredicted RBP12.12□□□□□ -0.47
CDH4-202ENST00000611855 CCDC24Q8N4L8 307 aa12.12□□□□□ -0.47
CDH4-202ENST00000611855 TBC1D22AQ8WUA7 517 aa12.12□□□□□ -0.47
CDH4-202ENST00000611855 TBC1D5Q92609 795 aa12.12□□□□□ -0.47
CDH4-202ENST00000611855 ZBTB10Q96DT7 871 aa12.12□□□□□ -0.47
CDH4-202ENST00000611855 MTA3Q9BTC8 594 aa12.12□□□□□ -0.47
CDH4-202ENST00000611855 NOD2Q9HC29 1040 aa12.12□□□□□ -0.47
CDH4-202ENST00000611855 FLT1P17948 1338 aa12.12□□□□□ -0.47
CDH4-202ENST00000611855 ATXN2Q99700 1313 aaKnown RBP12.12□□□□□ -0.47
CDH4-202ENST00000611855 TMCO5BA8MYB1 307 aa12.12□□□□□ -0.47
CDH4-202ENST00000611855 CYTH3O43739 400 aa12.12□□□□□ -0.47
CDH4-202ENST00000611855 PRDX5P30044 214 aa12.12□□□□□ -0.47
CDH4-202ENST00000611855 CTNNA1P35221 906 aaKnown RBP12.12□□□□□ -0.47
CDH4-202ENST00000611855 POLR2FP61218 127 aaKnown RBP12.12□□□□□ -0.47
CDH4-202ENST00000611855 FAM43BQ6ZT52 329 aaPredicted RBP12.12□□□□□ -0.47
CDH4-202ENST00000611855 CCDC50Q8IVM0 306 aa12.12□□□□□ -0.47
CDH4-202ENST00000611855 ZNF526Q8TF50 670 aaPredicted RBP12.12□□□□□ -0.47
CDH4-202ENST00000611855 DCP1AQ9NPI6 582 aaPredicted RBP12.12□□□□□ -0.47
CDH4-202ENST00000611855 GGT7Q9UJ14 662 aa12.12□□□□□ -0.47
CDH4-202ENST00000611855 MYH3P11055 1940 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 HGSO14964 777 aaPredicted RBP12.11□□□□□ -0.47
CDH4-202ENST00000611855 CACNB1Q02641 598 aaPredicted RBP12.11□□□□□ -0.47
CDH4-202ENST00000611855 RAPGEF1Q13905 1077 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 FAM133BQ5BKY9 247 aaKnown RBP12.11□□□□□ -0.47
CDH4-202ENST00000611855 C6orf89Q6UWU4 347 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 ARFGAP2Q8N6H7 521 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 ARMC2Q8NEN0 867 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 MDM1Q8TC05 714 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 LRRC4CQ9HCJ2 640 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 ADAMTS1Q9UHI8 967 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 NIP7Q9Y221 180 aaKnown RBP eCLIP12.11□□□□□ -0.47
CDH4-202ENST00000611855 ALS2Q96Q42 1657 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 MYMKA6NI61 221 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 DCDC2CA8MYV0 355 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 HMGB1P1B2RPK0 211 aaPredicted RBP12.11□□□□□ -0.47
CDH4-202ENST00000611855 KCNK3O14649 394 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 PLCB4Q15147 1175 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 CCDC152Q4G0S7 254 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 C3orf67Q6ZVT6 689 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 SMIM5Q71RC9 77 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 BAP1Q92560 729 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 CALR3Q96L12 384 aaKnown RBP12.11□□□□□ -0.47
CDH4-202ENST00000611855 TRIM31Q9BZY9 425 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 YIPF3Q9GZM5 350 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 BIN2Q9UBW5 565 aaPredicted RBP12.11□□□□□ -0.47
CDH4-202ENST00000611855 COL1A1P02452 1464 aaPredicted RBP12.11□□□□□ -0.47
CDH4-202ENST00000611855 TNS2Q63HR2 1409 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 SMIM23A6NLE4 172 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 KIF5BP33176 963 aa12.11□□□□□ -0.47
CDH4-202ENST00000611855 NAPAP54920 295 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms