RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 ADCYAP1R1P41586 468 aa10.06□□□□□ -0.8
SMAD4-217ENST00000611848 TNFAIP2Q03169 654 aa10.06□□□□□ -0.8
SMAD4-217ENST00000611848 CCDC173Q0VFZ6 552 aa10.06□□□□□ -0.8
SMAD4-217ENST00000611848 DUSP28Q4G0W2 176 aa10.06□□□□□ -0.8
SMAD4-217ENST00000611848 ANO1Q5XXA6 986 aa10.06□□□□□ -0.8
SMAD4-217ENST00000611848 CHRDL2Q6WN34 429 aa10.06□□□□□ -0.8
SMAD4-217ENST00000611848 HS6ST3Q8IZP7 471 aa10.06□□□□□ -0.8
SMAD4-217ENST00000611848 NSUN7Q8NE18 718 aaKnown RBP10.06□□□□□ -0.8
SMAD4-217ENST00000611848 WDR11Q9BZH6 1224 aa10.06□□□□□ -0.8
SMAD4-217ENST00000611848 SPC25Q9HBM1 224 aa10.06□□□□□ -0.8
SMAD4-217ENST00000611848 XPNPEP3Q9NQH7 507 aa10.06□□□□□ -0.8
SMAD4-217ENST00000611848 PDGFCQ9NRA1 345 aa10.06□□□□□ -0.8
SMAD4-217ENST00000611848 VPS54Q9P1Q0 977 aa10.06□□□□□ -0.8
SMAD4-217ENST00000611848 ORC3Q9UBD5 711 aaPredicted RBP10.06□□□□□ -0.8
SMAD4-217ENST00000611848 PCDHA6Q9UN73 950 aa10.06□□□□□ -0.8
SMAD4-217ENST00000611848 PCDHA8Q9Y5H6 950 aa10.06□□□□□ -0.8
SMAD4-217ENST00000611848 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.05□□□□□ -0.8
SMAD4-217ENST00000611848 NKRFO15226 690 aaKnown RBP eCLIP10.05□□□□□ -0.8
SMAD4-217ENST00000611848 FIBPO43427 364 aa10.05□□□□□ -0.8
SMAD4-217ENST00000611848 FARP2O94887 1054 aaPredicted RBP10.05□□□□□ -0.8
SMAD4-217ENST00000611848 LETM1O95202 739 aaPredicted RBP10.05□□□□□ -0.8
SMAD4-217ENST00000611848 SMPD1P17405 629 aa10.05□□□□□ -0.8
SMAD4-217ENST00000611848 CLK2P49760 499 aaKnown RBP10.05□□□□□ -0.8
SMAD4-217ENST00000611848 NLRP5P59047 1200 aa10.05□□□□□ -0.8
SMAD4-217ENST00000611848 HMGN5P82970 282 aaKnown RBP10.05□□□□□ -0.8
SMAD4-217ENST00000611848 TTLL4Q14679 1199 aa10.05□□□□□ -0.8
SMAD4-217ENST00000611848 UBE2SQ16763 222 aa10.05□□□□□ -0.8
SMAD4-217ENST00000611848 CCDC183Q5T5S1 534 aa10.05□□□□□ -0.8
SMAD4-217ENST00000611848 GALNT17Q6IS24 598 aa10.05□□□□□ -0.8
SMAD4-217ENST00000611848 KCNV1Q6PIU1 500 aa10.05□□□□□ -0.8
SMAD4-217ENST00000611848 RNF180Q86T96 592 aa10.05□□□□□ -0.8
SMAD4-217ENST00000611848 GNEQ9Y223 722 aaKnown RBP10.05□□□□□ -0.8
SMAD4-217ENST00000611848 MYH7BA7E2Y1 1941 aa10.05□□□□□ -0.8
SMAD4-217ENST00000611848 DNM1LO00429 736 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 ADAMTS4O75173 837 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 TGFB3P10600 412 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 GJA9P57773 515 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 KRT85P78386 507 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 RESTQ13127 1097 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 LRRC41Q15345 812 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 PCNX4Q63HM2 1172 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 SEPT14Q6ZU15 432 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 NECAB2Q7Z6G3 386 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 UBE2Q1Q7Z7E8 422 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 REXO1Q8N1G1 1221 aaKnown RBP10.04□□□□□ -0.8
SMAD4-217ENST00000611848 IL31RAQ8NI17 732 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 ANO3Q9BYT9 981 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 AP5M1Q9H0R1 490 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 UPF3AQ9H1J1 476 aaKnown RBP10.04□□□□□ -0.8
SMAD4-217ENST00000611848 ZSCAN16Q9H4T2 348 aaPredicted RBP10.04□□□□□ -0.8
SMAD4-217ENST00000611848 PCDHA4Q9UN74 947 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 KBTBD13C9JR72 458 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 ADCY6O43306 1168 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 PGK1P00558 417 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 TXNP10599 105 aaKnown RBP10.04□□□□□ -0.8
SMAD4-217ENST00000611848 FDPSP14324 419 aaKnown RBP10.04□□□□□ -0.8
SMAD4-217ENST00000611848 CST5P28325 142 aaPredicted RBP10.04□□□□□ -0.8
SMAD4-217ENST00000611848 MNX1P50219 401 aaPredicted RBP10.04□□□□□ -0.8
SMAD4-217ENST00000611848 NKX3-2P78367 333 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 MRPS9P82933 396 aaKnown RBP10.04□□□□□ -0.8
SMAD4-217ENST00000611848 GNPTABQ3T906 1256 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 JAKMIP3Q5VZ66 844 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 CCDC62Q6P9F0 684 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 TLK2Q86UE8 772 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 PCSK9Q8NBP7 692 aaKnown RBP10.04□□□□□ -0.8
SMAD4-217ENST00000611848 DAGLBQ8NCG7 672 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 KLHDC9Q8NEP7 349 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 ANP32BQ92688 251 aaKnown RBP10.04□□□□□ -0.8
SMAD4-217ENST00000611848 LENG1Q96BZ8 264 aaPredicted RBP10.04□□□□□ -0.8
SMAD4-217ENST00000611848 PAWRQ96IZ0 340 aaKnown RBP10.04□□□□□ -0.8
SMAD4-217ENST00000611848 AIFM3Q96NN9 605 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 INPP4AQ96PE3 977 aaPredicted RBP10.04□□□□□ -0.8
SMAD4-217ENST00000611848 TSEN34Q9BSV6 310 aaKnown RBP10.04□□□□□ -0.8
SMAD4-217ENST00000611848 ALG1Q9BT22 464 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 SCAND2PQ9GZW5 306 aaPredicted RBP10.04□□□□□ -0.8
SMAD4-217ENST00000611848 TSPY26PQ9H489 355 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 DDX41Q9UJV9 622 aaKnown RBP10.04□□□□□ -0.8
SMAD4-217ENST00000611848 KIF3AQ9Y496 699 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 MRVI1Q9Y6F6 885 aa10.04□□□□□ -0.8
SMAD4-217ENST00000611848 SYNRGQ9UMZ2 1314 aa10.03□□□□□ -0.8
SMAD4-217ENST00000611848 DYNC1LI2O43237 492 aaPredicted RBP10.03□□□□□ -0.8
SMAD4-217ENST00000611848 ZEB2O60315 1214 aa10.03□□□□□ -0.8
SMAD4-217ENST00000611848 RGS20O76081 388 aa10.03□□□□□ -0.8
SMAD4-217ENST00000611848 C6orf222P0C671 652 aaPredicted RBP10.03□□□□□ -0.8
SMAD4-217ENST00000611848 ICAM3P32942 547 aa10.03□□□□□ -0.8
SMAD4-217ENST00000611848 SREBF1P36956 1147 aa10.03□□□□□ -0.8
SMAD4-217ENST00000611848 GJC2Q5T442 439 aaPredicted RBP10.03□□□□□ -0.8
SMAD4-217ENST00000611848 NLRX1Q86UT6 975 aa10.03□□□□□ -0.8
SMAD4-217ENST00000611848 FERMT3Q86UX7 667 aa10.03□□□□□ -0.8
SMAD4-217ENST00000611848 BLIDQ8IZY5 108 aa10.03□□□□□ -0.8
SMAD4-217ENST00000611848 CDHR1Q96JP9 859 aa10.03□□□□□ -0.8
SMAD4-217ENST00000611848 PDLIM2Q96JY6 352 aa10.03□□□□□ -0.8
SMAD4-217ENST00000611848 PHF20Q9BVI0 1012 aa10.03□□□□□ -0.8
SMAD4-217ENST00000611848 C11orf49Q9H6J7 331 aa10.03□□□□□ -0.8
SMAD4-217ENST00000611848 TMEM260Q9NX78 707 aa10.03□□□□□ -0.8
SMAD4-217ENST00000611848 MOXD2PA6NHM9 499 aa10.02□□□□□ -0.81
SMAD4-217ENST00000611848 MAFGO15525 162 aa10.02□□□□□ -0.81
SMAD4-217ENST00000611848 ARIH2O95376 493 aa10.02□□□□□ -0.81
SMAD4-217ENST00000611848 COL6A1P12109 1028 aa10.02□□□□□ -0.81
SMAD4-217ENST00000611848 MLLT1Q03111 559 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms