RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, human

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11B-205	ENST00000611150	PDCD7	Q8N8D1	485 aa	Known RBP	18.78	■□□□□ 0.6
CDK11B-205	ENST00000611150	GDAP1	Q8TB36	358 aa		18.78	■□□□□ 0.6
CDK11B-205	ENST00000611150	HNRNPAB	Q99729	332 aa	Known RBP	18.78	■□□□□ 0.6
CDK11B-205	ENST00000611150	CENPK	Q9BS16	269 aa		18.78	■□□□□ 0.6
CDK11B-205	ENST00000611150	ITIH6	Q6UXX5	1313 aa		18.78	■□□□□ 0.6
CDK11B-205	ENST00000611150	PPL	O60437	1756 aa		18.78	■□□□□ 0.6
CDK11B-205	ENST00000611150	ABCC6	O95255	1503 aa		18.77	■□□□□ 0.6
CDK11B-205	ENST00000611150	MYL6B	P14649	208 aa		18.77	■□□□□ 0.6
CDK11B-205	ENST00000611150	STK32A	Q8WU08	396 aa		18.77	■□□□□ 0.6
CDK11B-205	ENST00000611150	TUBGCP5	Q96RT8	1024 aa		18.77	■□□□□ 0.6
CDK11B-205	ENST00000611150	PDE2A	O00408	941 aa	Predicted RBP	18.77	■□□□□ 0.6
CDK11B-205	ENST00000611150	SART1	O43290	800 aa	Known RBP	18.77	■□□□□ 0.6
CDK11B-205	ENST00000611150	HSPA8	P11142	646 aa	Known RBP	18.77	■□□□□ 0.6
CDK11B-205	ENST00000611150	HAL	P42357	657 aa		18.77	■□□□□ 0.6
CDK11B-205	ENST00000611150	HSP90AA4P	Q58FG1	418 aa		18.77	■□□□□ 0.6
CDK11B-205	ENST00000611150	NEPRO	Q6NW34	567 aa		18.77	■□□□□ 0.6
CDK11B-205	ENST00000611150	BLOC1S2	Q6QNY1	142 aa		18.77	■□□□□ 0.6
CDK11B-205	ENST00000611150	PTF1A	Q7RTS3	328 aa		18.77	■□□□□ 0.6
CDK11B-205	ENST00000611150	IFT20	Q8IY31	132 aa		18.77	■□□□□ 0.6
CDK11B-205	ENST00000611150	EVI5L	Q96CN4	794 aa		18.77	■□□□□ 0.6
CDK11B-205	ENST00000611150	RAB3IP	Q96QF0	476 aa	Predicted RBP	18.77	■□□□□ 0.6
CDK11B-205	ENST00000611150	SLC7A5P2	Q9GIP4	190 aa		18.77	■□□□□ 0.6
CDK11B-205	ENST00000611150	SBNO2	Q9Y2G9	1366 aa		18.77	■□□□□ 0.59
CDK11B-205	ENST00000611150	ZNF18	P17022	549 aa		18.76	■□□□□ 0.59
CDK11B-205	ENST00000611150	EZH2	Q15910	746 aa	Known RBP	18.76	■□□□□ 0.59
CDK11B-205	ENST00000611150	TMEM259	Q4ZIN3	620 aa		18.76	■□□□□ 0.59
CDK11B-205	ENST00000611150	GJC2	Q5T442	439 aa	Predicted RBP	18.76	■□□□□ 0.59
CDK11B-205	ENST00000611150	CATIP	Q7Z7H3	387 aa		18.76	■□□□□ 0.59
CDK11B-205	ENST00000611150	DDX54	Q8TDD1	881 aa	Known RBP	18.76	■□□□□ 0.59
CDK11B-205	ENST00000611150	KCNG4	Q8TDN1	519 aa		18.76	■□□□□ 0.59
CDK11B-205	ENST00000611150	CCT7	Q99832	543 aa		18.76	■□□□□ 0.59
CDK11B-205	ENST00000611150	KRT23	Q9C075	422 aa		18.76	■□□□□ 0.59
CDK11B-205	ENST00000611150	MKS1	Q9NXB0	559 aa		18.76	■□□□□ 0.59
CDK11B-205	ENST00000611150	NKX1-2	Q9UD57	310 aa	Predicted RBP	18.76	■□□□□ 0.59
CDK11B-205	ENST00000611150	MET	P08581	1390 aa		18.76	■□□□□ 0.59
CDK11B-205	ENST00000611150	ANO9	A1A5B4	782 aa		18.76	■□□□□ 0.59
CDK11B-205	ENST00000611150	PYGM	P11217	842 aa		18.76	■□□□□ 0.59
CDK11B-205	ENST00000611150	ENDOU	P21128	410 aa	Known RBP	18.76	■□□□□ 0.59
CDK11B-205	ENST00000611150	HOXD10	P28358	340 aa		18.76	■□□□□ 0.59
CDK11B-205	ENST00000611150	COPS2	P61201	443 aa		18.76	■□□□□ 0.59
CDK11B-205	ENST00000611150	LRIG3	Q6UXM1	1119 aa		18.76	■□□□□ 0.59
CDK11B-205	ENST00000611150	NUTM2A	Q8IVF1	878 aa	Predicted RBP	18.76	■□□□□ 0.59
CDK11B-205	ENST00000611150	TMCO5A	Q8N6Q1	288 aa		18.76	■□□□□ 0.59
CDK11B-205	ENST00000611150	ASAP3	Q8TDY4	903 aa		18.76	■□□□□ 0.59
CDK11B-205	ENST00000611150	XPO6	Q96QU8	1125 aa	Known RBP	18.76	■□□□□ 0.59
CDK11B-205	ENST00000611150	XRN1	Q8IZH2	1706 aa	Known RBP	18.76	■□□□□ 0.59
CDK11B-205	ENST00000611150	CPSF1	Q10570	1443 aa	Known RBP	18.75	■□□□□ 0.59
CDK11B-205	ENST00000611150	JCAD	Q9P266	1359 aa		18.75	■□□□□ 0.59
CDK11B-205	ENST00000611150	GSTT2	P0CG29	244 aa		18.75	■□□□□ 0.59
CDK11B-205	ENST00000611150	GSTT2B	P0CG30	244 aa		18.75	■□□□□ 0.59
CDK11B-205	ENST00000611150	POTEI	P0CG38	1075 aa		18.75	■□□□□ 0.59
CDK11B-205	ENST00000611150	MRPS25	P82663	173 aa	Known RBP	18.75	■□□□□ 0.59
CDK11B-205	ENST00000611150	PIGW	Q7Z7B1	504 aa		18.75	■□□□□ 0.59
CDK11B-205	ENST00000611150	USHBP1	Q8N6Y0	703 aa		18.75	■□□□□ 0.59
CDK11B-205	ENST00000611150	CTAGE1	Q96RT6	745 aa		18.75	■□□□□ 0.59
CDK11B-205	ENST00000611150	FADS3	Q9Y5Q0	445 aa		18.75	■□□□□ 0.59
CDK11B-205	ENST00000611150	PRPF3	O43395	683 aa	Known RBP	18.75	■□□□□ 0.59
CDK11B-205	ENST00000611150	TJP3	O95049	919 aa		18.75	■□□□□ 0.59
CDK11B-205	ENST00000611150	SPATA31D3	P0C874	917 aa		18.75	■□□□□ 0.59
CDK11B-205	ENST00000611150	POTEJ	P0CG39	1038 aa		18.75	■□□□□ 0.59
CDK11B-205	ENST00000611150	TPBGL	P0DKB5	382 aa		18.75	■□□□□ 0.59
CDK11B-205	ENST00000611150	RCN2	Q14257	317 aa		18.75	■□□□□ 0.59
CDK11B-205	ENST00000611150	NECTIN1	Q15223	517 aa		18.75	■□□□□ 0.59
CDK11B-205	ENST00000611150	CCDC152	Q4G0S7	254 aa		18.75	■□□□□ 0.59
CDK11B-205	ENST00000611150	SPATA31D4	Q6ZUB0	917 aa		18.75	■□□□□ 0.59
CDK11B-205	ENST00000611150	CASP10	Q92851	521 aa		18.75	■□□□□ 0.59
CDK11B-205	ENST00000611150	NEK1	Q96PY6	1258 aa		18.75	■□□□□ 0.59
CDK11B-205	ENST00000611150	CCDC68	Q9H2F9	335 aa		18.75	■□□□□ 0.59
CDK11B-205	ENST00000611150	CNOT10	Q9H9A5	744 aa	Known RBP	18.75	■□□□□ 0.59
CDK11B-205	ENST00000611150	SEL1L	Q9UBV2	794 aa		18.75	■□□□□ 0.59
CDK11B-205	ENST00000611150	NFE2L3	Q9Y4A8	694 aa		18.75	■□□□□ 0.59
CDK11B-205	ENST00000611150	ZMYM6	O95789	1325 aa		18.74	■□□□□ 0.59
CDK11B-205	ENST00000611150		A0A1B0GTH6	734 aa		18.74	■□□□□ 0.59
CDK11B-205	ENST00000611150	POTEF	A5A3E0	1075 aa		18.74	■□□□□ 0.59
CDK11B-205	ENST00000611150	UBOX5	O94941	541 aa		18.74	■□□□□ 0.59
CDK11B-205	ENST00000611150	MATR3	P43243	847 aa	Known RBP eCLIP	18.74	■□□□□ 0.59
CDK11B-205	ENST00000611150	ZNF572	Q7Z3I7	529 aa	Predicted RBP	18.74	■□□□□ 0.59
CDK11B-205	ENST00000611150	RBM46	Q8TBY0	533 aa	Known RBP	18.74	■□□□□ 0.59
CDK11B-205	ENST00000611150	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	18.74	■□□□□ 0.59
CDK11B-205	ENST00000611150	JADE2	Q9NQC1	790 aa		18.74	■□□□□ 0.59
CDK11B-205	ENST00000611150	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	18.74	■□□□□ 0.59	8e-7	■■■■■ 41.1
CDK11B-205	ENST00000611150	CYP39A1	Q9NYL5	469 aa		18.74	■□□□□ 0.59
CDK11B-205	ENST00000611150	KIAA1522	Q9P206	1035 aa	Predicted RBP	18.74	■□□□□ 0.59
CDK11B-205	ENST00000611150	PLAA	Q9Y263	795 aa		18.74	■□□□□ 0.59
CDK11B-205	ENST00000611150	TSC22D4	Q9Y3Q8	395 aa		18.74	■□□□□ 0.59
CDK11B-205	ENST00000611150	TTI1	O43156	1089 aa		18.74	■□□□□ 0.59
CDK11B-205	ENST00000611150	KPNB1	Q14974	876 aa	Known RBP	18.74	■□□□□ 0.59
CDK11B-205	ENST00000611150	STK38	Q15208	465 aa		18.74	■□□□□ 0.59
CDK11B-205	ENST00000611150	LONRF3	Q496Y0	759 aa		18.74	■□□□□ 0.59
CDK11B-205	ENST00000611150	CENPT	Q96BT3	561 aa		18.74	■□□□□ 0.59
CDK11B-205	ENST00000611150	BTBD7	Q9P203	1132 aa		18.74	■□□□□ 0.59
CDK11B-205	ENST00000611150	MYH15	Q9Y2K3	1946 aa		18.73	■□□□□ 0.59
CDK11B-205	ENST00000611150	ZNF185	O15231	689 aa		18.73	■□□□□ 0.59
CDK11B-205	ENST00000611150	PTDSS1	P48651	473 aa	Known RBP	18.73	■□□□□ 0.59
CDK11B-205	ENST00000611150	PTH1R	Q03431	593 aa		18.73	■□□□□ 0.59
CDK11B-205	ENST00000611150	SAFB	Q15424	915 aa	Known RBP eCLIP	18.73	■□□□□ 0.59
CDK11B-205	ENST00000611150	C3orf62	Q6ZUJ4	267 aa		18.73	■□□□□ 0.59
CDK11B-205	ENST00000611150	KIF2B	Q8N4N8	673 aa		18.73	■□□□□ 0.59
CDK11B-205	ENST00000611150	SCAI	Q8N9R8	606 aa		18.73	■□□□□ 0.59
CDK11B-205	ENST00000611150	OLFM3	Q96PB7	478 aa		18.73	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms